A Comprehensive Survey of Mamba Architectures for Medical Image Analysis: Classification, Segmentation, Restoration and Beyond
On the map: State-space sequence models (S4, Mamba) → Mamba for medical image analysis
Abstract (arXiv)
Mamba, a special case of the State Space Model, is gaining popularity as an alternative to template-based deep learning approaches in medical image analysis. While transformers are powerful architectures, they have drawbacks, including quadratic computational complexity and an inability to address long-range dependencies efficiently. This limitation affects the analysis of large and complex datasets in medical imaging, where there are many spatial and temporal relationships. In contrast, Mamba offers benefits that make it well-suited for medical image analysis. It has linear time complexity, which is a significant improvement over transformers. Mamba processes longer sequences without attention mechanisms, enabling faster inference and requiring less memory. Mamba also demonstrates strong performance in merging multimodal data, improving diagnosis accuracy and patient outcomes. The organization of this paper allows readers to appreciate the capabilities of Mamba in medical imaging step by step. We begin by defining core concepts of SSMs and models, including S4, S5, and S6, followed by an exploration of Mamba architectures such as pure Mamba, U-Net variants, and hybrid models with convolutional neural networks, transformers, and Graph Neural Networks. We also cover Mamba optimizations, techniques and adaptations, scanning, datasets, applications, experimental results, and conclude with its challenges and future directions in medical imaging. This review aims to demonstrate the transformative potential of Mamba in overcoming existing barriers within medical imaging while paving the way for innovative advancements in the field. A comprehensive list of Mamba architectures applied in the medical field, reviewed in this work, is available at Github.
Key facts. Cited by 16 papers in the map (data through 14 Oct 2026). Placed in Mamba for medical image analysis, one of 10 directions in State-space sequence models (S4, Mamba). Builds on 119 of its 180 references that are in the map. First posted on arXiv 3 Oct 2024.
Builds on
119 of 180 references.
Closest ancestors · 37
Same direction, newest first
- 2024Tri-Plane Mamba: Efficiently Adapting Segment Anything Model for 3D Medical Images13 Sep
- 2024HMT-UNet: A hybird Mamba-Transformer Vision UNet for Medical Image Segmentation21 Aug
- 2024MambaMIM: Pre-training Mamba with State Space Token Interpolation and its Application to Medical Image Segmentation15 Aug
- 2024GFE-Mamba: Mamba-based AD Multi-modal Progression Assessment via Generative Feature Extraction from MCI22 Jul
- 2024SliceMamba with Neural Architecture Search for Medical Image Segmentation11 Jul
- 2024xLSTM-UNet can be an Effective 2D & 3D Medical Image Segmentation Backbone with Vision-LSTM (ViL) better than its Mamba Counterpart1 Jul
- 2024CAMS: Convolution and Attention-Free Mamba-based Cardiac Image Segmentation9 Jun
- 2024Computation-Efficient Era: A Comprehensive Survey of State Space Models in Medical Image Analysis5 Jun
- 2024MGI: Multimodal Contrastive pre-training of Genomic and Medical Imaging2 Jun
- 2024UU-Mamba: Uncertainty-aware U-Mamba for Cardiac Image Segmentation25 May
- 2024MUCM-Net: A Mamba Powered UCM-Net for Skin Lesion Segmentation24 May
- 2024VM-DDPM: Vision Mamba Diffusion for Medical Image Synthesis9 May
25 more
- 2024HC-Mamba: Vision MAMBA with Hybrid Convolutional Techniques for Medical Image Segmentation8 May
- 2024ViM-UNet: Vision Mamba for Biomedical Segmentation11 Apr
- 2024T-Mamba: A unified framework with Long-Range Dependency in dual-domain for 2D & 3D Tooth Segmentation1 Apr
- 2024UltraLight VM-UNet: Parallel Vision Mamba Significantly Reduces Parameters for Skin Lesion Segmentation29 Mar
- 2024Integrating Mamba Sequence Model and Hierarchical Upsampling Network for Accurate Semantic Segmentation of Multiple Sclerosis Legion26 Mar
- 2024ProMamba: Prompt-Mamba for polyp segmentation20 Mar
- 2024H-vmunet: High-order Vision Mamba UNet for Medical Image Segmentation20 Mar
- 2024VM-UNET-V2 Rethinking Vision Mamba UNet for Medical Image Segmentation14 Mar
- 2024MD-Dose: A diffusion model based on the Mamba for radiation dose prediction13 Mar
- 2024LKM-UNet: Large Kernel Vision Mamba UNet for Medical Image Segmentation12 Mar
- 2024MambaMIL: Enhancing Long Sequence Modeling with Sequence Reordering in Computational Pathology11 Mar
- 2024LightM-UNet: Mamba Assists in Lightweight UNet for Medical Image Segmentation8 Mar
- 2024MamMIL: Multiple Instance Learning for Whole Slide Images with State Space Models8 Mar
- 2024MedMamba: Vision Mamba for Medical Image Classification6 Mar
- 2024MambaMIR: An Arbitrary-Masked Mamba for Joint Medical Image Reconstruction and Uncertainty Estimation28 Feb
- 2024Weak-Mamba-UNet: Visual Mamba Makes CNN and ViT Work Better for Scribble-based Medical Image Segmentation16 Feb
- 2024P-Mamba: Marrying Perona Malik Diffusion with Mamba for Efficient Pediatric Echocardiographic Left Ventricular Segmentation13 Feb
- 2024Semi-Mamba-UNet: Pixel-Level Contrastive and Pixel-Level Cross-Supervised Visual Mamba-based UNet for Semi-Supervised Medical Image Segmentation11 Feb
- 2024FD-Vision Mamba for Endoscopic Exposure Correction9 Feb
- 2024Mamba-UNet: UNet-Like Pure Visual Mamba for Medical Image Segmentation7 Feb
- 2024Swin-UMamba: Mamba-based UNet with ImageNet-based pretraining5 Feb
- 2024VM-UNet: Vision Mamba UNet for Medical Image Segmentation4 Feb
- 2024Vivim: a Video Vision Mamba for Medical Video Segmentation25 Jan
- 2024SegMamba: Long-range Sequential Modeling Mamba For 3D Medical Image Segmentation24 Jan
- 2024U-Mamba: Enhancing Long-range Dependency for Biomedical Image Segmentation9 Jan
Other references · 82
- 2017Attention Is All You Needcited by 60,361
- 2015Deep Residual Learning for Image Recognitioncited by 52,096
- 2021Learning Transferable Visual Models From Natural Language Supervisioncited by 33,744
- 2020Language Models are Few-Shot Learnerscited by 32,419
- 2020An Image is Worth 16x16 Words: Transformers for Image Recognition at Scalecited by 30,186
- 2020Denoising Diffusion Probabilistic Modelscited by 21,076
- 2024The Llama 3 Herd of Modelscited by 14,715
- 2023LLaMA: Open and Efficient Foundation Language Modelscited by 14,132
- 2023Llama 2: Open Foundation and Fine-Tuned Chat Modelscited by 13,028
- 2017Graph Attention Networkscited by 8,923
- 2023Segment Anythingcited by 8,234
- 2021Emerging Properties in Self-Supervised Vision Transformerscited by 6,968
38 more
- 2023Mamba: Linear-Time Sequence Modeling with Selective State Spacescited by 4,718
- 2020Training data-efficient image transformers & distillation through attentioncited by 4,586
- 2022FlashAttention: Fast and Memory-Efficient Exact Attention with IO-Awarenesscited by 3,673
- 2016Gaussian Error Linear Units (GELUs)cited by 3,502
- 2023FlashAttention-2: Faster Attention with Better Parallelism and Work Partitioningcited by 2,598
- 2021Efficiently Modeling Long Sequences with Structured State Spacescited by 2,465
- 2020Transformers are RNNs: Fast Autoregressive Transformers with Linear Attentioncited by 2,022
- 2024Transformers are SSMs: Generalized Models and Efficient Algorithms Through Structured State Space Dualitycited by 1,336
- 2016Instance Normalization: The Missing Ingredient for Fast Stylizationcited by 1,198
- 2016SqueezeNet: AlexNet-level accuracy with 50x fewer parameters and <0.5MB model sizecited by 1,060
- 2024Vision Mamba: Efficient Visual Representation Learning with Bidirectional State Space Modelcited by 1,056
- 2024VMamba: Visual State Space Modelcited by 969
- 2021UNETR: Transformers for 3D Medical Image Segmentationcited by 959
- 2017Sigmoid-Weighted Linear Units for Neural Network Function Approximation in Reinforcement Learningcited by 950
- 2022Simplified State Space Layers for Sequence Modelingcited by 788
- 2020Data Efficient and Weakly Supervised Computational Pathology on Whole Slide Imagescited by 745
- 2019Skin Lesion Analysis Toward Melanoma Detection 2018: A Challenge Hosted by the International Skin Imaging Collaboration (ISIC)cited by 669
- 2021Combining Recurrent, Convolutional, and Continuous-time Models with Linear State-Space Layerscited by 608
- 2019ECA-Net: Efficient Channel Attention for Deep Convolutional Neural Networkscited by 575
- 2022Hungry Hungry Hippos: Towards Language Modeling with State Space Modelscited by 499
- 2018fastMRI: An Open Dataset and Benchmarks for Accelerated MRIcited by 470
- 2022On the Parameterization and Initialization of Diagonal State Space Modelscited by 424
- 2019A large annotated medical image dataset for the development and evaluation of segmentation algorithmscited by 373
- 2022AMOS: A Large-Scale Abdominal Multi-Organ Benchmark for Versatile Medical Image Segmentationcited by 351
- 2022Diagonal State Spaces are as Effective as Structured State Spacescited by 350
- 2024VideoMamba: State Space Model for Efficient Video Understandingcited by 328
- 2024xLSTM: Extended Long Short-Term Memorycited by 327
- 2023Customized Segment Anything Model for Medical Image Segmentationcited by 280
- 2024LocalMamba: Visual State Space Model with Windowed Selective Scancited by 236
- 20192017 Robotic Instrument Segmentation Challengecited by 168
- 2024EfficientVMamba: Atrous Selective Scan for Light Weight Visual Mambacited by 146
- 2024PlainMamba: Improving Non-Hierarchical Mamba in Visual Recognitioncited by 141
- 2020PAD-UFES-20: a skin lesion dataset composed of patient data and clinical images collected from smartphonescited by 118
- 2024Motion Mamba: Efficient and Long Sequence Motion Generationcited by 112
- 2024RSMamba: Remote Sensing Image Classification with State Space Modelcited by 95
- 2024VmambaIR: Visual State Space Model for Image Restorationcited by 90
- 2024Mamba-ND: Selective State Space Modeling for Multi-Dimensional Datacited by 84
- 2024ZigMa: A DiT-style Zigzag Mamba Diffusion Modelcited by 84
50 most cited of 82 All 82 (JSON)
Built on by
Citing papers per year: 2024: 1; 2025: 8; 2026: 7.
16 papers.
Sort:
By area:
- 2025Advancing Intelligent Sequence Modeling: Evolution, Trade-offs, and Applications of State-Space Architectures from S4 to Mambacited by 9
- 2025A Survey on Mamba Architecture for Vision Applicationscited by 8
- 2025MedMambaLite: Hardware-Aware Mamba for Medical Image Classificationcited by 4
- 2025MARL-MambaContour: Unleashing Multi-Agent Deep Reinforcement Learning for Active Contour Optimization in Medical Image Segmentationcited by 3
- 2025COMMA: Coordinate-aware Modulated Mamba Network for 3D Dispersed Vessel Segmentationcited by 1
- 2025Mamba-Based Ensemble learning for White Blood Cell Classificationcited by 1
- 2026Efficient Deep Learning for Medical Imaging: Bridging the Gap Between High-Performance AI and Clinical Deploymentcited by 1
- 2024When Mamba Meets xLSTM: An Efficient and Precise Method with the xLSTM-VMUNet Model for Skin lesion Segmentationcited by 0
- 2025Adaptive Contrast Adjustment Module: A Clinically-Inspired Plug-and-Play Approach for Enhanced Fetal Plane Classificationcited by 0
- 2025XAI-Driven Diagnosis of Generalization Failure in State-Space Cerebrovascular Segmentation Models: A Case Study on Domain Shift Between RSNA and TopCoW Datasetscited by 0
- 2026PAS-Mamba: Phase-Amplitude-Spatial State Space Model for MRI Reconstructioncited by 0
- 2026AS-Mamba: Asymmetric Self-Guided Mamba Decoupled Iterative Network for Metal Artifact Reductioncited by 0
4 more
- 2026Is Mamba Reliable for Medical Imaging?cited by 0
- 2026Rhamba: Region-Aware Hybrid Attention-Mamba Framework for Self-Supervised Learning in Resting-State fMRIcited by 0
- 2026State Space Models Meet Remote Sensing: A Surveycited by 0
- 2026A Unified Benchmark of Deep Learning Models for Multi-task 3D Brain Tumor Segmentation from Magnetic Resonance Imagingcited by 0
- 2026A Unified Benchmark of Deep Learning Models for Multi-task 3D Brain Tumor Segmentation from Magnetic Resonance Imaging30 Jul 2026
- 2026State Space Models Meet Remote Sensing: A Survey24 Jun 2026
- 2026Rhamba: Region-Aware Hybrid Attention-Mamba Framework for Self-Supervised Learning in Resting-State fMRI2 May 2026
- 2026Is Mamba Reliable for Medical Imaging?16 Feb 2026
- 2026AS-Mamba: Asymmetric Self-Guided Mamba Decoupled Iterative Network for Metal Artifact Reduction6 Feb 2026
- 2026Efficient Deep Learning for Medical Imaging: Bridging the Gap Between High-Performance AI and Clinical Deployment31 Jan 2026
- 2026PAS-Mamba: Phase-Amplitude-Spatial State Space Model for MRI Reconstruction20 Jan 2026
- 2025XAI-Driven Diagnosis of Generalization Failure in State-Space Cerebrovascular Segmentation Models: A Case Study on Domain Shift Between RSNA and TopCoW Datasets16 Dec 2025
- 2025Adaptive Contrast Adjustment Module: A Clinically-Inspired Plug-and-Play Approach for Enhanced Fetal Plane Classification31 Aug 2025
- 2025MedMambaLite: Hardware-Aware Mamba for Medical Image Classification7 Aug 2025
- 2025MARL-MambaContour: Unleashing Multi-Agent Deep Reinforcement Learning for Active Contour Optimization in Medical Image Segmentation23 Jun 2025
- 2025Mamba-Based Ensemble learning for White Blood Cell Classification15 Apr 2025
4 more
- 2025Advancing Intelligent Sequence Modeling: Evolution, Trade-offs, and Applications of State-Space Architectures from S4 to Mamba22 Mar 2025
- 2025COMMA: Coordinate-aware Modulated Mamba Network for 3D Dispersed Vessel Segmentation4 Mar 2025
- 2025A Survey on Mamba Architecture for Vision Applications11 Feb 2025
- 2024When Mamba Meets xLSTM: An Efficient and Precise Method with the xLSTM-VMUNet Model for Skin lesion Segmentation14 Nov 2024
- 2025Advancing Intelligent Sequence Modeling: Evolution, Trade-offs, and Applications of State-Space Architectures from S4 to Mambacited by 9
- 2025A Survey on Mamba Architecture for Vision Applicationscited by 8
- 2025MedMambaLite: Hardware-Aware Mamba for Medical Image Classificationcited by 4
- 2025COMMA: Coordinate-aware Modulated Mamba Network for 3D Dispersed Vessel Segmentationcited by 1
- 2025Mamba-Based Ensemble learning for White Blood Cell Classificationcited by 1
- 2024When Mamba Meets xLSTM: An Efficient and Precise Method with the xLSTM-VMUNet Model for Skin lesion Segmentationcited by 0
- 2026PAS-Mamba: Phase-Amplitude-Spatial State Space Model for MRI Reconstructioncited by 0
- 2026AS-Mamba: Asymmetric Self-Guided Mamba Decoupled Iterative Network for Metal Artifact Reductioncited by 0
- 2026Is Mamba Reliable for Medical Imaging?cited by 0
- 2026Rhamba: Region-Aware Hybrid Attention-Mamba Framework for Self-Supervised Learning in Resting-State fMRIcited by 0
- 2026Rhamba: Region-Aware Hybrid Attention-Mamba Framework for Self-Supervised Learning in Resting-State fMRI2 May 2026
- 2026Is Mamba Reliable for Medical Imaging?16 Feb 2026
- 2026AS-Mamba: Asymmetric Self-Guided Mamba Decoupled Iterative Network for Metal Artifact Reduction6 Feb 2026
- 2026PAS-Mamba: Phase-Amplitude-Spatial State Space Model for MRI Reconstruction20 Jan 2026
- 2025MedMambaLite: Hardware-Aware Mamba for Medical Image Classification7 Aug 2025
- 2025Mamba-Based Ensemble learning for White Blood Cell Classification15 Apr 2025
- 2025Advancing Intelligent Sequence Modeling: Evolution, Trade-offs, and Applications of State-Space Architectures from S4 to Mamba22 Mar 2025
- 2025COMMA: Coordinate-aware Modulated Mamba Network for 3D Dispersed Vessel Segmentation4 Mar 2025
- 2025A Survey on Mamba Architecture for Vision Applications11 Feb 2025
- 2024When Mamba Meets xLSTM: An Efficient and Precise Method with the xLSTM-VMUNet Model for Skin lesion Segmentation14 Nov 2024
- 2025MARL-MambaContour: Unleashing Multi-Agent Deep Reinforcement Learning for Active Contour Optimization in Medical Image Segmentationcited by 3
- 2026Efficient Deep Learning for Medical Imaging: Bridging the Gap Between High-Performance AI and Clinical Deploymentcited by 1
- 2025Adaptive Contrast Adjustment Module: A Clinically-Inspired Plug-and-Play Approach for Enhanced Fetal Plane Classificationcited by 0
- 2025XAI-Driven Diagnosis of Generalization Failure in State-Space Cerebrovascular Segmentation Models: A Case Study on Domain Shift Between RSNA and TopCoW Datasetscited by 0
- 2026State Space Models Meet Remote Sensing: A Surveycited by 0
- 2026A Unified Benchmark of Deep Learning Models for Multi-task 3D Brain Tumor Segmentation from Magnetic Resonance Imagingcited by 0
- 2026A Unified Benchmark of Deep Learning Models for Multi-task 3D Brain Tumor Segmentation from Magnetic Resonance Imaging30 Jul 2026
- 2026State Space Models Meet Remote Sensing: A Survey24 Jun 2026
- 2026Efficient Deep Learning for Medical Imaging: Bridging the Gap Between High-Performance AI and Clinical Deployment31 Jan 2026
- 2025XAI-Driven Diagnosis of Generalization Failure in State-Space Cerebrovascular Segmentation Models: A Case Study on Domain Shift Between RSNA and TopCoW Datasets16 Dec 2025
- 2025Adaptive Contrast Adjustment Module: A Clinically-Inspired Plug-and-Play Approach for Enhanced Fetal Plane Classification31 Aug 2025
- 2025MARL-MambaContour: Unleashing Multi-Agent Deep Reinforcement Learning for Active Contour Optimization in Medical Image Segmentation23 Jun 2025
Similar, not cited
Close in wording, no citation either way
- 2025A Comprehensive Analysis of Mamba for 3D Volumetric Medical Image Segmentation
- 2024MambaClinix: Hierarchical Gated Convolution and Mamba-Based U-Net for Enhanced 3D Medical Image Segmentation
- 2025MambaVesselNet++: A Hybrid CNN-Mamba Architecture for Medical Image Segmentation
- 2024Vision Mamba: Cutting-Edge Classification of Alzheimer's Disease with 3D MRI Scans
- 2024Taming Mambas for Voxel Level 3D Medical Image Segmentation
- 2026A Hybrid Mamba-SAM Architecture for Efficient 3D Medical Image Segmentation
- 2024EM-Net: Efficient Channel and Frequency Learning with Mamba for 3D Medical Image Segmentation
- 2024LoG-VMamba: Local-Global Vision Mamba for Medical Image Segmentation