Integrating Mamba Sequence Model and Hierarchical Upsampling Network for Accurate Semantic Segmentation of Multiple Sclerosis Legion
On the map: State-space sequence models (S4, Mamba) → Mamba for medical image analysis
Abstract (arXiv)
Integrating components from convolutional neural networks and state space models in medical image segmentation presents a compelling approach to enhance accuracy and efficiency. We introduce Mamba HUNet, a novel architecture tailored for robust and efficient segmentation tasks. Leveraging strengths from Mamba UNet and the lighter version of Hierarchical Upsampling Network (HUNet), Mamba HUNet combines convolutional neural networks local feature extraction power with state space models long range dependency modeling capabilities. We first converted HUNet into a lighter version, maintaining performance parity and then integrated this lighter HUNet into Mamba HUNet, further enhancing its efficiency. The architecture partitions input grayscale images into patches, transforming them into 1D sequences for processing efficiency akin to Vision Transformers and Mamba models. Through Visual State Space blocks and patch merging layers, hierarchical features are extracted while preserving spatial information. Experimental results on publicly available Magnetic Resonance Imaging scans, notably in Multiple Sclerosis lesion segmentation, demonstrate Mamba HUNet's effectiveness across diverse segmentation tasks. The model's robustness and flexibility underscore its potential in handling complex anatomical structures. These findings establish Mamba HUNet as a promising solution in advancing medical image segmentation, with implications for improving clinical decision making processes.
Key facts. Cited by 8 papers in the map (data through 7 Oct 2026). Placed in Mamba for medical image analysis, one of 10 directions in State-space sequence models (S4, Mamba). Builds on 26 of its 36 references that are in the map. First posted on arXiv 26 Mar 2024.
Builds on
26 of 36 references.
Closest ancestors · 3
Same direction, newest first
- 2024Mamba-UNet: UNet-Like Pure Visual Mamba for Medical Image Segmentation7 Feb
- 2024SegMamba: Long-range Sequential Modeling Mamba For 3D Medical Image Segmentation24 Jan
- 2024U-Mamba: Enhancing Long-range Dependency for Biomedical Image Segmentation9 Jan
Other references · 23
- 2017Attention Is All You Needcited by 59,932
- 2020An Image is Worth 16x16 Words: Transformers for Image Recognition at Scalecited by 29,915
- 2015U-Net: Convolutional Networks for Biomedical Image Segmentationcited by 19,604
- 2021Swin Transformer: Hierarchical Vision Transformer using Shifted Windowscited by 12,082
- 2014Fully Convolutional Networks for Semantic Segmentationcited by 4,845
- 2023Mamba: Linear-Time Sequence Modeling with Selective State Spacescited by 4,616
- 2021Efficiently Modeling Long Sequences with Structured State Spacescited by 2,424
- 2018Attention U-Net: Learning Where to Look for the Pancreascited by 1,420
- 2021Swin Transformer V2: Scaling Up Capacity and Resolutioncited by 1,215
- 2021Video Swin Transformercited by 1,090
- 2024VMamba: Visual State Space Modelcited by 955
- 2021UNETR: Transformers for 3D Medical Image Segmentationcited by 954
11 more
- 2020Long Range Arena: A Benchmark for Efficient Transformerscited by 696
- 2021Combining Recurrent, Convolutional, and Continuous-time Models with Linear State-Space Layerscited by 607
- 2020HiPPO: Recurrent Memory with Optimal Polynomial Projectionscited by 600
- 2019UNet++: Redesigning Skip Connections to Exploit Multiscale Features in Image Segmentationcited by 583
- 2019The Liver Tumor Segmentation Benchmark (LiTS)cited by 504
- 2022Long Range Language Modeling via Gated State Spacescited by 265
- 2019MultiResUNet : Rethinking the U-Net Architecture for Multimodal Biomedical Image Segmentationcited by 195
- 2019The state of the art in kidney and kidney tumor segmentation in contrast-enhanced CT imaging: Results of the KiTS19 Challengecited by 188
- 2021Self-Supervised Learning with Swin Transformerscited by 121
- 2023Selective Structured State-Spaces for Long-Form Video Understandingcited by 105
- 2020RAR-U-Net: a Residual Encoder to Attention Decoder by Residual Connections Framework for Spine Segmentation under Noisy Labelscited by 10
Built on by
Citing papers per year: 2024: 8.
8 papers.
- 2024State Space Model for New-Generation Network Alternative to Transformers: A Surveycited by 59
- 2024Vision Mamba: A Comprehensive Survey and Taxonomycited by 53
- 2024A Survey on Visual Mambacited by 50
- 2024A Survey of Mambacited by 39
- 2024Mamba in Vision: A Comprehensive Survey of Techniques and Applicationscited by 18
- 2024A Comprehensive Survey of Mamba Architectures for Medical Image Analysis: Classification, Segmentation, Restoration and Beyondcited by 16
- 2024Optimizing Universal Lesion Segmentation: State Space Model-Guided Hierarchical Networks with Feature Importance Adjustmentcited by 1
- 2024Variable Aperture Bokeh Rendering via Customized Focal Plane Guidancecited by 1
- 2024Variable Aperture Bokeh Rendering via Customized Focal Plane Guidance18 Oct 2024
- 2024Mamba in Vision: A Comprehensive Survey of Techniques and Applications4 Oct 2024
- 2024A Comprehensive Survey of Mamba Architectures for Medical Image Analysis: Classification, Segmentation, Restoration and Beyond3 Oct 2024
- 2024A Survey of Mamba2 Aug 2024
- 2024Vision Mamba: A Comprehensive Survey and Taxonomy7 May 2024
- 2024Optimizing Universal Lesion Segmentation: State Space Model-Guided Hierarchical Networks with Feature Importance Adjustment26 Apr 2024
- 2024A Survey on Visual Mamba24 Apr 2024
- 2024State Space Model for New-Generation Network Alternative to Transformers: A Survey15 Apr 2024
Similar, not cited
Close in wording, no citation either way
- 2024MambaClinix: Hierarchical Gated Convolution and Mamba-Based U-Net for Enhanced 3D Medical Image Segmentation
- 2024HC-Mamba: Vision MAMBA with Hybrid Convolutional Techniques for Medical Image Segmentation
- 2025MambaVesselNet++: A Hybrid CNN-Mamba Architecture for Medical Image Segmentation
- 2024Attention-Mamba: A Mamba-Enhanced Multi-Scale Parallel Inference Network for Medical Image Segmentation
- 2024MSVM-UNet: Multi-Scale Vision Mamba UNet for Medical Image Segmentation
- 2025HyM-UNet: Synergizing Local Texture and Global Context via Hybrid CNN-Mamba Architecture for Medical Image Segmentation
- 2024LoG-VMamba: Local-Global Vision Mamba for Medical Image Segmentation
- 2024Swin-UMamba: Mamba-based UNet with ImageNet-based pretraining