Neural Prototype Trees for Interpretable Fine-grained Image Recognition
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Abstract (arXiv)
Prototype-based methods use interpretable representations to address the black-box nature of deep learning models, in contrast to post-hoc explanation methods that only approximate such models. We propose the Neural Prototype Tree (ProtoTree), an intrinsically interpretable deep learning method for fine-grained image recognition. ProtoTree combines prototype learning with decision trees, and thus results in a globally interpretable model by design. Additionally, ProtoTree can locally explain a single prediction by outlining a decision path through the tree. Each node in our binary tree contains a trainable prototypical part. The presence or absence of this learned prototype in an image determines the routing through a node. Decision making is therefore similar to human reasoning: Does the bird have a red throat? And an elongated beak? Then it's a hummingbird! We tune the accuracy-interpretability trade-off using ensemble methods, pruning and binarizing. We apply pruning without sacrificing accuracy, resulting in a small tree with only 8 learned prototypes along a path to classify a bird from 200 species. An ensemble of 5 ProtoTrees achieves competitive accuracy on the CUB-200- 2011 and Stanford Cars data sets. Code is available at https://github.com/M-Nauta/ProtoTree
Key facts. Cited by 213 papers in the map (data through 7 Oct 2026). First posted on arXiv 3 Dec 2020.
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Citing papers per year: 2021: 12; 2022: 37; 2023: 50; 2024: 49; 2025: 44; 2026: 21.
213 papers.
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- 2022Diffusion Models for Counterfactual Explanationscited by 79
- 2022Diffusion Models for Counterfactual Explanations29 Mar 2022
- 2021Interpretable Machine Learning: Fundamental Principles and 10 Grand Challengescited by 364
- 2022Language in a Bottle: Language Model Guided Concept Bottlenecks for Interpretable Image Classificationcited by 310
- 2022From Anecdotal Evidence to Quantitative Evaluation Methods: A Systematic Review on Evaluating Explainable AIcited by 299
- 2021Benchmarking and Survey of Explanation Methods for Black Box Modelscited by 136
- 2023Explainable Artificial Intelligence (XAI) 2.0: A Manifesto of Open Challenges and Interdisciplinary Research Directionscited by 123
- 2021Deformable ProtoPNet: An Interpretable Image Classifier Using Deformable Prototypescited by 120
- 2021HIVE: Evaluating the Human Interpretability of Visual Explanationscited by 105
- 2021Interpretable Image Classification with Differentiable Prototypes Assignmentcited by 97
- 2022GlanceNets: Interpretabile, Leak-proof Concept-based Modelscited by 73
- 2022ProtoPFormer: Concentrating on Prototypical Parts in Vision Transformers for Interpretable Image Recognitioncited by 63
- 2022"Help Me Help the AI": Understanding How Explainability Can Support Human-AI Interactioncited by 63
- 2022Visual Recognition with Deep Nearest Centroidscited by 59
12 most cited of 206 All 206 (JSON)
- 2026From Image Latent Space to Fuzzy Rules: Interpretable Analysis of Gastrointestinal Foundation Model30 Sep 2026
- 2026A Unifying Framework of Concept-based Explainable AI with Completeness Guarantees28 Sep 2026
- 2026OPAL: Orthonormal Prototype Alignment Learning for Interpretable Image Classification30 Aug 2026
- 2026ProtoPointNet: Prototype-Based Interpretable Classification of 3D Dental Point Clouds with Verifiable Spatial Activations14 Jul 2026
- 2026GRAPE: Graph-Augmented Prototype Explanations for Interactive Medical Image Diagnosis29 Jun 2026
- 2026Beyond Points: Spherical Distributional Part Prototypes for Interpretable Classification25 Jun 2026
- 2026Discovering Latent Groups for Robust Classification22 Jun 2026
- 2026Interpretable Computer Vision for Defect Detection in X-ray Tomography of Aerospace SiC/SiC Composites19 May 2026
- 2026ProDG: Prototypes for Data-Free Generative Post-Hoc Explainability9 May 2026
- 2026Explainable Part-Based Vehicle Classifier with Spatial Awareness8 May 2026
- 2026DINO-QPM: Adapting Visual Foundation Models for Globally Interpretable Image Classification8 Apr 2026
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