Uncertainty Quantification and Deep Ensembles
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Abstract (arXiv)
Deep Learning methods are known to suffer from calibration issues: they typically produce over-confident estimates. These problems are exacerbated in the low data regime. Although the calibration of probabilistic models is well studied, calibrating extremely over-parametrized models in the low-data regime presents unique challenges. We show that deep-ensembles do not necessarily lead to improved calibration properties. In fact, we show that standard ensembling methods, when used in conjunction with modern techniques such as mixup regularization, can lead to less calibrated models. This text examines the interplay between three of the most simple and commonly used approaches to leverage deep learning when data is scarce: data-augmentation, ensembling, and post-processing calibration methods. Although standard ensembling techniques certainly help boost accuracy, we demonstrate that the calibration of deep ensembles relies on subtle trade-offs. We also find that calibration methods such as temperature scaling need to be slightly tweaked when used with deep-ensembles and, crucially, need to be executed after the averaging process. Our simulations indicate that this simple strategy can halve the Expected Calibration Error (ECE) on a range of benchmark classification problems compared to standard deep-ensembles in the low data regime.
Key facts. Cited by 138 papers in the map (data through 7 Oct 2026). First posted on arXiv 17 Jul 2020.
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Citing papers per year: 2021: 9; 2022: 19; 2023: 27; 2024: 30; 2025: 36; 2026: 17.
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- 2021A Survey of Uncertainty in Deep Neural Networkscited by 675
- 2021Revisiting the Calibration of Modern Neural Networkscited by 387
- 2024Benchmarking LLMs via Uncertainty Quantificationcited by 124
- 2024A Survey on Uncertainty Quantification of Large Language Models: Taxonomy, Open Research Challenges, and Future Directionscited by 115
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- 2024COME: Test-time adaption by Conservatively Minimizing Entropycited by 31
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- 2024FedCal: Achieving Local and Global Calibration in Federated Learning via Aggregated Parameterized Scalercited by 6
- 2025Light-Weight Diffusion Multiplier and Uncertainty Quantification for Fourier Neural Operatorscited by 6
50 most cited of 138 All 138 (JSON)
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- 2026AquaGen: Scaling generative models to molecular dynamics precision on thousands of atoms3 Jul 2026
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- 2025Model-Agnostic Dynamic Feature Selection with Uncertainty Quantification4 Aug 2025
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- 2025Where are we with calibration under dataset shift in image classification?10 Jul 2025
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- 2025h-calibration: Rethinking Classifier Recalibration with Probabilistic Error-Bounded Objective22 Jun 2025
- 2025Beyond Overconfidence: Foundation Models Redefine Calibration in Deep Neural Networks11 Jun 2025
- 2025CLUE: Neural Networks Calibration via Learning Uncertainty-Error alignment28 May 2025
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- 2025Robust Confinement State Classification with Uncertainty Quantification through Ensembled Data-Driven Methods24 Feb 2025
- 2025Neural Spatiotemporal Point Processes: Trends and Challenges13 Feb 2025
50 newest of 138 All 138 (JSON)
- 2021A Survey of Uncertainty in Deep Neural Networkscited by 675
- 2021Revisiting the Calibration of Modern Neural Networkscited by 387
- 2024Benchmarking LLMs via Uncertainty Quantificationcited by 124
- 2024A Survey on Uncertainty Quantification of Large Language Models: Taxonomy, Open Research Challenges, and Future Directionscited by 115
- 2021Priors in Bayesian Deep Learning: A Reviewcited by 101
- 2023Calibration in Deep Learning: A Survey of the State-of-the-Artcited by 72
- 2022Deep Ensembles Work, But Are They Necessary?cited by 63
- 2022A Unifying Theory of Distance from Calibrationcited by 51
- 2023Towards Reliable Misinformation Mitigation: Generalization, Uncertainty, and GPT-4cited by 45
- 2022NeuralUQ: A comprehensive library for uncertainty quantification in neural differential equations and operatorscited by 33
- 2023Dual Focal Loss for Calibrationcited by 33
- 2024COME: Test-time adaption by Conservatively Minimizing Entropycited by 31
12 most cited of 132 All 132 (JSON)
- 2026Explainable Uncertainty Estimation for Reliable Medical AI28 Aug 2026
- 2026Uncertainty quantification for trustworthy deep learning: Methods and measures30 Jul 2026
- 2026AquaGen: Scaling generative models to molecular dynamics precision on thousands of atoms3 Jul 2026
- 2026Rethinking Post-Hoc Calibration in Semantic Segmentation2 Jul 2026
- 2026Assessing Reliability of Symbol Detection in Concept Bottleneck Models15 Jun 2026
- 2026Conformal Prediction for Neural Operators: Distribution-Free Uncertainty Quantification in Physics Simulation7 Jun 2026
- 2026Learning Context-conditioned Gaussian Overbounds for Convolution-Based Uncertainty Propagation15 May 2026
- 2026Principle-Guided Supervision for Interpretable Uncertainty in Medical Image Segmentation9 May 2026
- 2026When Can Voting Help, Hurt, or Change Course? Exact Structure of Binary Test-Time Aggregation7 May 2026
- 2026Monte Carlo Stochastic Depth for Uncertainty Estimation in Deep Learning14 Apr 2026
- 2026Causal Representation Learning on High-Dimensional Data: Benchmarks, Reproducibility, and Evaluation Metrics18 Mar 2026
- 2026JANUS: Structured Bidirectional Generation for Guaranteed Constraints and Analytical Uncertainty4 Mar 2026
12 newest of 132 All 132 (JSON)