mlsanityData to 7 Oct 2026

Forces are not Enough: Benchmark and Critical Evaluation for Machine Learning Force Fields with Molecular Simulations

arXiv 2210.07237 ↗First posted 13 Oct 2022physics.comp-ph cs.LG physics.chem-phcited by 92

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Abstract (arXiv)

Molecular dynamics (MD) simulation techniques are widely used for various natural science applications. Increasingly, machine learning (ML) force field (FF) models begin to replace ab-initio simulations by predicting forces directly from atomic structures. Despite significant progress in this area, such techniques are primarily benchmarked by their force/energy prediction errors, even though the practical use case would be to produce realistic MD trajectories. We aim to fill this gap by introducing a novel benchmark suite for learned MD simulation. We curate representative MD systems, including water, organic molecules, a peptide, and materials, and design evaluation metrics corresponding to the scientific objectives of respective systems. We benchmark a collection of state-of-the-art (SOTA) ML FF models and illustrate, in particular, how the commonly benchmarked force accuracy is not well aligned with relevant simulation metrics. We demonstrate when and how selected SOTA methods fail, along with offering directions for further improvement. Specifically, we identify stability as a key metric for ML models to improve. Our benchmark suite comes with a comprehensive open-source codebase for training and simulation with ML FFs to facilitate future work.

Key facts. Cited by 92 papers in the map (data through 7 Oct 2026). Builds on 33 of its 94 references that are in the map. First posted on arXiv 13 Oct 2022.

Builds on

33 of 94 references.

References · 33

  1. 2017Neural Message Passing for Quantum Chemistrycited by 3,460
  2. 2021E(n) Equivariant Graph Neural Networkscited by 951
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  5. 2021E(3)-Equivariant Graph Neural Networks for Data-Efficient and Accurate Interatomic Potentialscited by 701
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  7. 2020Directional Message Passing for Molecular Graphscited by 556
  8. 2021Equivariant message passing for the prediction of tensorial properties and molecular spectracited by 438
  9. 2021GemNet: Universal Directional Graph Neural Networks for Moleculescited by 342
  10. 2022Equiformer: Equivariant Graph Attention Transformer for 3D Atomistic Graphscited by 258
  11. 2022Learning Local Equivariant Representations for Large-Scale Atomistic Dynamicscited by 254
  12. 2020The Open Catalyst 2020 (OC20) Dataset and Community Challengescited by 246
21 more
  1. 2017Deep Potential Molecular Dynamics: a scalable model with the accuracy of quantum mechanicscited by 213
  2. 2020Machine Learning Force Fieldscited by 204
  3. 2022TorchMD-NET: Equivariant Transformers for Neural Network based Molecular Potentialscited by 179
  4. 2021Spherical Message Passing for 3D Graph Networkscited by 166
  5. 2021SpookyNet: Learning Force Fields with Electronic Degrees of Freedom and Nonlocal Effectscited by 103
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  7. 2022The Open Catalyst 2022 (OC22) Dataset and Challenges for Oxide Electrocatalystscited by 95
  8. 2022SPICE, A Dataset of Drug-like Molecules and Peptides for Training Machine Learning Potentialscited by 80
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  10. 2022GemNet-OC: Developing Graph Neural Networks for Large and Diverse Molecular Simulation Datasetscited by 61
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  13. 2018Coarse-Graining Auto-Encoders for Molecular Dynamicscited by 30
  14. 2021Learning neural network potentials from experimental data via Differentiable Trajectory Reweightingcited by 26
  15. 2020Differentiable Molecular Simulations for Control and Learningcited by 25
  16. 2021Differentiable sampling of molecular geometries with uncertainty-based adversarial attackscited by 25
  17. 2021Machine Learning Implicit Solvation for Molecular Dynamicscited by 16
  18. 2018Transferable neural networks for enhanced sampling of protein dynamicscited by 9
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  20. 2021Accelerating amorphous polymer electrolyte screening by learning to reduce errors in molecular dynamics simulated propertiescited by 3
  21. 2022Automatic Identification of Chemical Moietiescited by 2

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Cited by year (2026 to 7 Oct)

Citing papers per year: 2022: 1; 2023: 21; 2024: 29; 2025: 25; 2026: 16.

92 papers.

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  1. 2025Learning Smooth and Expressive Interatomic Potentials for Physical Property Predictioncited by 79
  2. 2023A Hitchhiker's Guide to Geometric GNNs for 3D Atomic Systemscited by 65
  3. 2024Orb: A Fast, Scalable Neural Network Potentialcited by 63
  4. 2024Open Materials 2024 (OMat24) Inorganic Materials Dataset and Modelscited by 50
  5. 2024The Importance of Being Scalable: Improving the Speed and Accuracy of Neural Network Interatomic Potentials Across Chemical Domainscited by 40
  6. 2023Matbench Discovery -- A framework to evaluate machine learning crystal stability predictionscited by 34
  7. 2023Scaling the leading accuracy of deep equivariant models to biomolecular simulations of realistic sizecited by 33
  8. 2024Cartesian atomic cluster expansion for machine learning interatomic potentialscited by 31
  9. 2023Single-model uncertainty quantification in neural network potentials does not consistently outperform model ensemblescited by 30
  10. 2023Evaluation of the MACE Force Field Architecture: from Medicinal Chemistry to Materials Sciencecited by 25
  11. 2025A practical guide to machine learning interatomic potentials -- Status and futurecited by 24
  12. 2025LeMat-GenBench: A Unified Evaluation Framework for Crystal Generative Modelscited by 20
38 more
  1. 2024Generalizing Denoising to Non-Equilibrium Structures Improves Equivariant Force Fieldscited by 18
  2. 2023EGraFFBench: Evaluation of Equivariant Graph Neural Network Force Fields for Atomistic Simulationscited by 15
  3. 2024TorchMD-Net 2.0: Fast Neural Network Potentials for Molecular Simulationscited by 15
  4. 2025Towards Fast, Specialized Machine Learning Force Fields: Distilling Foundation Models via Energy Hessianscited by 15
  5. 2023MatSciML: A Broad, Multi-Task Benchmark for Solid-State Materials Modelingcited by 14
  6. 2023Towards equilibrium molecular conformation generation with GFlowNetscited by 14
  7. 2023CHGNet: Pretrained universal neural network potential for charge-informed atomistic modelingcited by 13
  8. 2023May the Force be with You: Unified Force-Centric Pre-Training for 3D Molecular Conformationscited by 13
  9. 2024A predictive machine learning force field framework for liquid electrolyte developmentcited by 13
  10. 2024Beyond Canonicalization: How Tensorial Messages Improve Equivariant Message Passingcited by 13
  11. 2024Probing the effects of broken symmetries in machine learningcited by 13
  12. 2024Euclidean Fast Attention -- Machine Learning Global Atomic Representations at Linear Costcited by 12
  13. 2022Scalable Bayesian Uncertainty Quantification for Neural Network Potentials: Promise and Pitfallscited by 11
  14. 2023Denoise Pretraining on Nonequilibrium Molecules for Accurate and Transferable Neural Potentialscited by 11
  15. 2023Uncertainty Estimation for Molecules: Desiderata and Methodscited by 11
  16. 2023Data efficiency and extrapolation trends in neural network interatomic potentialscited by 10
  17. 2024Neural SPH: Improved Neural Modeling of Lagrangian Fluid Dynamicscited by 10
  18. 2024Model-free quantification of completeness, uncertainties, and outliers in atomistic machine learning using information theorycited by 10
  19. 2025How simple can you go? An off-the-shelf transformer approach to molecular dynamicscited by 10
  20. 2023Statistically Optimal Force Aggregation for Coarse-Graining Molecular Dynamicscited by 9
  21. 2024Flow Matching for Accelerated Simulation of Atomic Transport in Crystalline Materialscited by 9
  22. 2023Machine-learning-accelerated simulations to enable automatic surface reconstructioncited by 8
  23. 2024A Recipe for Charge Density Predictioncited by 8
  24. 2024Towards Symbolic XAI -- Explanation Through Human Understandable Logical Relationships Between Featurescited by 7
  25. 2025Learning from the electronic structure of molecules across the periodic tablecited by 7
  26. 2024High-Rank Irreducible Cartesian Tensor Decomposition and Bases of Equivariant Spacescited by 6
  27. 2025chemtrain-deploy: A parallel and scalable framework for machine learning potentials in million-atom MD simulationscited by 6
  28. 2025Transformers Discover Molecular Structure Without Graph Priorscited by 6
  29. 2026MatRIS: Toward Reliable and Efficient Pretrained Machine Learning Interatomic Potentialscited by 6
  30. 2023Learning Interatomic Potentials at Multiple Scalescited by 5
  31. 2024A Multi-Grained Symmetric Differential Equation Model for Learning Protein-Ligand Binding Dynamicscited by 5
  32. 2025UniFFBench: Evaluating Universal Machine Learning Force Fields Against Experimental Measurementscited by 5
  33. 2026Learning Hamiltonian Flow Maps: Mean Flow Consistency for Large-Timestep Molecular Dynamicscited by 5
  34. 2026Harnessing AtomisticSkills for Agentic Atomistic Researchcited by 5
  35. 2025MatterTune: An Integrated, User-Friendly Platform for Fine-Tuning Atomistic Foundation Models to Accelerate Materials Simulation and Discoverycited by 4
  36. 2025LeMat-Traj: A Scalable and Unified Dataset of Materials Trajectories for Atomistic Modelingcited by 4
  37. 2023Allegro-Legato: Scalable, Fast, and Robust Neural-Network Quantum Molecular Dynamics via Sharpness-Aware Minimizationcited by 3
  38. 2023Transformer-Based Neural Surrogate for Link-Level Path Loss Prediction from Variable-Sized Mapscited by 3

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