Forces are not Enough: Benchmark and Critical Evaluation for Machine Learning Force Fields with Molecular Simulations
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Abstract (arXiv)
Molecular dynamics (MD) simulation techniques are widely used for various natural science applications. Increasingly, machine learning (ML) force field (FF) models begin to replace ab-initio simulations by predicting forces directly from atomic structures. Despite significant progress in this area, such techniques are primarily benchmarked by their force/energy prediction errors, even though the practical use case would be to produce realistic MD trajectories. We aim to fill this gap by introducing a novel benchmark suite for learned MD simulation. We curate representative MD systems, including water, organic molecules, a peptide, and materials, and design evaluation metrics corresponding to the scientific objectives of respective systems. We benchmark a collection of state-of-the-art (SOTA) ML FF models and illustrate, in particular, how the commonly benchmarked force accuracy is not well aligned with relevant simulation metrics. We demonstrate when and how selected SOTA methods fail, along with offering directions for further improvement. Specifically, we identify stability as a key metric for ML models to improve. Our benchmark suite comes with a comprehensive open-source codebase for training and simulation with ML FFs to facilitate future work.
Key facts. Cited by 92 papers in the map (data through 7 Oct 2026). Builds on 33 of its 94 references that are in the map. First posted on arXiv 13 Oct 2022.
Builds on
33 of 94 references.
References · 33
- 2017Neural Message Passing for Quantum Chemistrycited by 3,460
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- 2020Learning to Simulate Complex Physics with Graph Networkscited by 867
- 2018Tensor field networks: Rotation- and translation-equivariant neural networks for 3D point cloudscited by 735
- 2021E(3)-Equivariant Graph Neural Networks for Data-Efficient and Accurate Interatomic Potentialscited by 701
- 2017SchNet: A continuous-filter convolutional neural network for modeling quantum interactionscited by 569
- 2020Directional Message Passing for Molecular Graphscited by 556
- 2021Equivariant message passing for the prediction of tensorial properties and molecular spectracited by 438
- 2021GemNet: Universal Directional Graph Neural Networks for Moleculescited by 342
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- 2022Learning Local Equivariant Representations for Large-Scale Atomistic Dynamicscited by 254
- 2020The Open Catalyst 2020 (OC20) Dataset and Community Challengescited by 246
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- 2022The Open Catalyst 2022 (OC22) Dataset and Challenges for Oxide Electrocatalystscited by 95
- 2022SPICE, A Dataset of Drug-like Molecules and Peptides for Training Machine Learning Potentialscited by 80
- 2018Machine Learning of coarse-grained Molecular Dynamics Force Fieldscited by 68
- 2022GemNet-OC: Developing Graph Neural Networks for Large and Diverse Molecular Simulation Datasetscited by 61
- 2021ForceNet: A Graph Neural Network for Large-Scale Quantum Calculationscited by 58
- 2020TorchMD: A deep learning framework for molecular simulationscited by 55
- 2018Coarse-Graining Auto-Encoders for Molecular Dynamicscited by 30
- 2021Learning neural network potentials from experimental data via Differentiable Trajectory Reweightingcited by 26
- 2020Differentiable Molecular Simulations for Control and Learningcited by 25
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- 2021Accelerating amorphous polymer electrolyte screening by learning to reduce errors in molecular dynamics simulated propertiescited by 3
- 2022Automatic Identification of Chemical Moietiescited by 2
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Citing papers per year: 2022: 1; 2023: 21; 2024: 29; 2025: 25; 2026: 16.
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- 2026Implicit Machine Learning Force Fields Accelerate Molecular Dynamics Simulations31 Jul 2026
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