mlsanityData to 7 Oct 2026

Generalizing Denoising to Non-Equilibrium Structures Improves Equivariant Force Fields

arXiv 2403.09549 ↗First posted 14 Mar 2024cs.LG cs.AI physics.chem-phcited by 18

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Abstract (arXiv)

Understanding the interactions of atoms such as forces in 3D atomistic systems is fundamental to many applications like molecular dynamics and catalyst design. However, simulating these interactions requires compute-intensive ab initio calculations and thus results in limited data for training neural networks. In this paper, we propose to use denoising non-equilibrium structures (DeNS) as an auxiliary task to better leverage training data and improve performance. For training with DeNS, we first corrupt a 3D structure by adding noise to its 3D coordinates and then predict the noise. Different from previous works on denoising, which are limited to equilibrium structures, the proposed method generalizes denoising to a much larger set of non-equilibrium structures. The main difference is that a non-equilibrium structure does not correspond to local energy minima and has non-zero forces, and therefore it can have many possible atomic positions compared to an equilibrium structure. This makes denoising non-equilibrium structures an ill-posed problem since the target of denoising is not uniquely defined. Our key insight is to additionally encode the forces of the original non-equilibrium structure to specify which non-equilibrium structure we are denoising. Concretely, given a corrupted non-equilibrium structure and the forces of the original one, we predict the non-equilibrium structure satisfying the input forces instead of any arbitrary structures. Since DeNS requires encoding forces, DeNS favors equivariant networks, which can easily incorporate forces and other higher-order tensors in node embeddings. We study the effectiveness of training equivariant networks with DeNS on OC20, OC22 and MD17 datasets and demonstrate that DeNS can achieve new state-of-the-art results on OC20 and OC22 and significantly improve training efficiency on MD17.

Key facts. Cited by 18 papers in the map (data through 7 Oct 2026). Builds on 54 of its 70 references that are in the map. First posted on arXiv 14 Mar 2024.

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54 of 70 references.

References · 54

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Cited by year (2026 to 7 Oct)

Citing papers per year: 2024: 5; 2025: 6; 2026: 7.

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  1. 2025Learning Smooth and Expressive Interatomic Potentials for Physical Property Predictioncited by 79
  2. 2024Orb: A Fast, Scalable Neural Network Potentialcited by 63
  3. 2024Open Materials 2024 (OMat24) Inorganic Materials Dataset and Modelscited by 50
  4. 2026EquiformerV3: Scaling Efficient, Expressive, and General SE(3)-Equivariant Graph Attention Transformerscited by 7
  5. 2026MatRIS: Toward Reliable and Efficient Pretrained Machine Learning Interatomic Potentialscited by 6
  6. 2024Using pretrained graph neural networks with token mixers as geometric featurizers for conformational dynamicscited by 5
  7. 2025LeMat-Traj: A Scalable and Unified Dataset of Materials Trajectories for Atomistic Modelingcited by 4
  8. 2025Scaling Laws and Symmetry, Evidence from Neural Force Fieldscited by 4
  9. 2026Self-Conditioned Denoising for Atomistic Representation Learningcited by 3
  10. 2024Deconstructing equivariant representations in molecular systemscited by 2
  11. 2026Edge Cluster Expansion with Radial Rotary Attention for Interatomic Potentialscited by 2
  12. 2024Physics-Informed Weakly Supervised Learning for Interatomic Potentialscited by 1
6 more
  1. 2025Augmenting Molecular Graphs with Geometries via Machine Learning Interatomic Potentialscited by 1
  2. 2026From Evaluation to Design: Using Potential Energy Surface Smoothness Metrics to Guide Machine Learning Interatomic Potential Architecturescited by 1
  3. 2026TriForces: Augmenting Atomistic GNNs for Transferable Representationscited by 1
  4. 2025On the Importance of Pretraining Data Alignment for Atomic Property Predictioncited by 0
  5. 2025Learning 3D Anisotropic Noise Distributions Improves Molecular Force Field Modelingcited by 0
  6. 2026Hessian-based molecular conformation augmentation for a scalable and efficient strategy of machine learning interatomic potentialscited by 0