mlsanityData to 14 Oct 2026

A review of uncertainty quantification in medical image analysis: probabilistic and non-probabilistic methods

arXiv 2310.06873 ↗First posted 9 Oct 2023eess.IV cs.CVcited by 39

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Abstract (arXiv)

The comprehensive integration of machine learning healthcare models within clinical practice remains suboptimal, notwithstanding the proliferation of high-performing solutions reported in the literature. A predominant factor hindering widespread adoption pertains to an insufficiency of evidence affirming the reliability of the aforementioned models. Recently, uncertainty quantification methods have been proposed as a potential solution to quantify the reliability of machine learning models and thus increase the interpretability and acceptability of the result. In this review, we offer a comprehensive overview of prevailing methods proposed to quantify uncertainty inherent in machine learning models developed for various medical image tasks. Contrary to earlier reviews that exclusively focused on probabilistic methods, this review also explores non-probabilistic approaches, thereby furnishing a more holistic survey of research pertaining to uncertainty quantification for machine learning models. Analysis of medical images with the summary and discussion on medical applications and the corresponding uncertainty evaluation protocols are presented, which focus on the specific challenges of uncertainty in medical image analysis. We also highlight some potential future research work at the end. Generally, this review aims to allow researchers from both clinical and technical backgrounds to gain a quick and yet in-depth understanding of the research in uncertainty quantification for medical image analysis machine learning models.

Key facts. Cited by 39 papers in the map (data through 14 Oct 2026). Builds on 132 of its 368 references that are in the map. First posted on arXiv 9 Oct 2023.

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132 of 368 references.

References · 132

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38 more
  1. 20183D MRI brain tumor segmentation using autoencoder regularizationcited by 328
  2. 2018nnU-Net: Self-adapting Framework for U-Net-Based Medical Image Segmentationcited by 291
  3. 2021Ensemble deep learning: A reviewcited by 284
  4. 2018A Probabilistic U-Net for Segmentation of Ambiguous Imagescited by 283
  5. 2018Aleatoric uncertainty estimation with test-time augmentation for medical image segmentation with convolutional neural networkscited by 280
  6. 2019Confidence Calibration and Predictive Uncertainty Estimation for Deep Medical Image Segmentationcited by 163
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  13. 2020Efficient Semi-Supervised Gross Target Volume of Nasopharyngeal Carcinoma Segmentation via Uncertainty Rectified Pyramid Consistencycited by 102
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  16. 2020Uncertainty-aware multi-view co-training for semi-supervised medical image segmentation and domain adaptationcited by 81
  17. 2019Assessing Reliability and Challenges of Uncertainty Estimations for Medical Image Segmentationcited by 75
  18. 2018Bayesian Uncertainty Estimation for Batch Normalized Deep Networkscited by 70
  19. 2021Inconsistency-aware Uncertainty Estimation for Semi-supervised Medical Image Segmentationcited by 61
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Citing papers per year: 2024: 5; 2025: 18; 2026: 16.

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  1. 2025Uncertainty Quantification for Machine Learning in Healthcare: A Surveycited by 14
  2. 2024Uncertainty-aware Medical Diagnostic Phrase Identification and Groundingcited by 13
  3. 2025DPsurv: Dual-Prototype Evidential Fusion for Uncertainty-Aware and Interpretable Whole-Slide Image Survival Predictioncited by 6
  4. 2024MedUHIP: Towards Human-In-the-Loop Medical Segmentationcited by 5
  5. 2025Aleatoric Uncertainty Medical Image Segmentation Estimation via Flow Matchingcited by 5
  6. 2025CONSIGN: Conformal Segmentation Informed by Spatial Groupings via Decompositioncited by 3
  7. 2024SPA: Efficient User-Preference Alignment against Uncertainty in Medical Image Segmentationcited by 2
  8. 2025Robust Explanations Through Uncertainty Decomposition: A Path to Trustworthier AIcited by 2
  9. 2026Feature Entanglement-based Quantum Multimodal Fusion Neural Networkcited by 2
  10. 2025Safeguarding AI in Medical Imaging: Post-Hoc Out-of-Distribution Detection with Normalizing Flowscited by 1
  11. 2025Finer Disentanglement of Aleatoric Uncertainty Can Accelerate Chemical Histopathology Imagingcited by 1
  12. 2025Safe Uncertainty-Aware Learning of Robotic Suturingcited by 1
27 more
  1. 2025UNSURF: Uncertainty Quantification for Cortical Surface Reconstruction of Clinical Brain MRIscited by 1
  2. 2025Single Image Inpainting and Super-Resolution with Simultaneous Uncertainty Guarantees by Universal Reproducing Kernelscited by 1
  3. 2026Delving Aleatoric Uncertainty in Medical Image Segmentation via Vision Foundation Modelscited by 1
  4. 2026Lost in the Folds: When Cross-Validation Is Not a Deep Ensemble for Uncertainty Estimationcited by 1
  5. 2026A Leakage-Aware Comparative Benchmark of Machine Learning, Deep Learning, and Transformer Models for Reliable Leukemia Detectioncited by 1
  6. 2026Reliability-Aware CT-MRI Registration: A Quality Engineering Framework with Stability Analysis and Risk Classificationcited by 1
  7. 2026A Ground-Truth Framework for Uncertainty Disentanglement with Posterior Riskcited by 1
  8. 2026Beyond Boundary Noise: Aggregated Aleatoric Uncertainty Fails to Capture Presence Ambiguity in 3D Lung Nodule Segmentationcited by 1
  9. 2024Expert-aware uncertainty estimation for quality control of neural-based blood typingcited by 0
  10. 2024DEMAU: Decompose, Explore, Model and Analyse Uncertaintiescited by 0
  11. 2025Interpretable Deep Learning Framework for Improved Disease Classification in Medical Imagingcited by 0
  12. 2025Reliable Radiologic Skeletal Muscle Area Assessment -- A Biomarker for Cancer Cachexia Diagnosiscited by 0
  13. 2025Explaining Uncertainty in Multiple Sclerosis Cortical Lesion Segmentation Beyond Prediction Errorscited by 0
  14. 2025A Comprehensive Framework for Uncertainty Quantification of Voxel-wise Supervised Models in IVIM MRIcited by 0
  15. 2025Influence of Classification Task and Distribution Shift Type on OOD Detection in Fetal Ultrasoundcited by 0
  16. 2025A Multi-faceted Analysis of Cognitive Abilities: Evaluating Prompt Methods with Large Language Models on the CONSORT Checklistcited by 0
  17. 2025Quantifying Uncertainty in Machine Learning-Based Pervasive Systems: Application to Human Activity Recognitioncited by 0
  18. 2025UbiQVision: Quantifying Uncertainty in XAI for Image Recognitioncited by 0
  19. 2026Anatomically-aware conformal prediction for medical image segmentation with random walkscited by 0
  20. 2026Variational Sparse Paired Autoencoders (vsPAIR) for Inverse Problems and Uncertainty Quantificationcited by 0
  21. 2026Enhancing the Reliability of Medical AI through Expert-guided Uncertainty Modelingcited by 0
  22. 2026Multi-Rater Calibrated Segmentation Modelscited by 0
  23. 2026Semantic-Anchored Evidential Fusion for Domain-Robust Whole-Slide Survival Analysiscited by 0
  24. 2026Evidential Fusion Network for Multimodal Survival Prediction under Missing Modalitiescited by 0
  25. 2026Multimodal Deep Learning for Uncertainty-Aware Radiation Pneumonitis Risk Predictioncited by 0
  26. 2026Anatomy-Change-Aware Bidirectional Selective State-Space Memory for Clinically Deployed Thoracic Radiotherapy Auto-Contouringcited by 0
  27. 2026Uncertainty-Guided Handshake: Efficient Human-in-the-Loop Refinement for Surgical-Grade Glioma Segmentationcited by 0