Are Natural Domain Foundation Models Useful for Medical Image Classification?
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Abstract (arXiv)
The deep learning field is converging towards the use of general foundation models that can be easily adapted for diverse tasks. While this paradigm shift has become common practice within the field of natural language processing, progress has been slower in computer vision. In this paper we attempt to address this issue by investigating the transferability of various state-of-the-art foundation models to medical image classification tasks. Specifically, we evaluate the performance of five foundation models, namely SAM, SEEM, DINOv2, BLIP, and OpenCLIP across four well-established medical imaging datasets. We explore different training settings to fully harness the potential of these models. Our study shows mixed results. DINOv2 consistently outperforms the standard practice of ImageNet pretraining. However, other foundation models failed to consistently beat this established baseline indicating limitations in their transferability to medical image classification tasks.
Key facts. Cited by 46 papers in the map (data through 14 Oct 2026). Builds on 34 of its 52 references that are in the map. First posted on arXiv 30 Oct 2023.
Builds on
34 of 52 references.
References · 34
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22 more
- 2022BLIP: Bootstrapping Language-Image Pre-training for Unified Vision-Language Understanding and Generationcited by 4,322
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- 2020Contrastive Learning of Medical Visual Representations from Paired Images and Textcited by 641
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- 2023Segment Everything Everywhere All at Oncecited by 548
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- 2023A Comprehensive Survey on Pretrained Foundation Models: A History from BERT to ChatGPTcited by 368
- 2023Segment Anything in Medical Imagescited by 227
- 2022Focal Modulation Networkscited by 186
- 2023Segment Anything Model (SAM) for Digital Pathology: Assess Zero-shot Segmentation on Whole Slide Imagingcited by 161
- 2023SAM on Medical Images: A Comprehensive Study on Three Prompt Modescited by 82
- 2022What Makes Transfer Learning Work For Medical Images: Feature Reuse & Other Factorscited by 61
- 2021Is it Time to Replace CNNs with Transformers for Medical Images?cited by 60
- 2023Can SAM Segment Polyps?cited by 59
- 2023Generalist Vision Foundation Models for Medical Imaging: A Case Study of Segment Anything Model on Zero-Shot Medical Segmentationcited by 51
- 2023Computer-Vision Benchmark Segment-Anything Model (SAM) in Medical Images: Accuracy in 12 Datasetscited by 45
- 2023Learnable Ophthalmology SAMcited by 21
- 2023Towards General Purpose Medical AI: Continual Learning Medical Foundation Modelcited by 14
- 2023Pretrained ViTs Yield Versatile Representations For Medical Imagescited by 13
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Citing papers per year: 2024: 18; 2025: 18; 2026: 10.
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- 2024Exploring scalable medical image encoders beyond text supervisioncited by 132
- 2024Comparative Analysis of ImageNet Pre-Trained Deep Learning Models and DINOv2 in Medical Imaging Classificationcited by 14
- 2024Towards a vision foundation model for comprehensive assessment of Cardiac MRIcited by 14
- 2024Medical Slice Transformer: Improved Diagnosis and Explainability on 3D Medical Images with DINOv2cited by 13
- 2024FACMIC: Federated Adaptative CLIP Model for Medical Image Classificationcited by 7
- 2025General Methods Make Great Domain-specific Foundation Models: A Case-study on Fetal Ultrasoundcited by 7
- 2025Boosting multi-demographic federated learning for chest radiograph analysis using general-purpose self-supervised representationscited by 6
- 2025Adapting Vision-Language Foundation Model for Next Generation Medical Ultrasound Image Analysiscited by 6
- 2024A Federated Learning-Friendly Approach for Parameter-Efficient Fine-Tuning of SAM in 3D Segmentationcited by 5
- 2024How Effective is Pre-training of Large Masked Autoencoders for Downstream Earth Observation Tasks?cited by 5
- 2025FAA-CLIP: Federated Adversarial Adaptation of CLIPcited by 5
- 2024Swin transformers are robust to distribution and concept drift in endoscopy-based longitudinal rectal cancer assessmentcited by 4
34 more
- 2024Graph Neural Networks: A suitable Alternative to MLPs in Latent 3D Medical Image Classification?cited by 4
- 2025Order Matters: On Parameter-Efficient Image-to-Video Probing for Recognizing Nearly Symmetric Actionscited by 3
- 2025DinoAtten3D: Slice-Level Attention Aggregation of DinoV2 for 3D Brain MRI Anomaly Classificationcited by 3
- 2024Masked Image Modelling for retinal OCT understandingcited by 2
- 2024Can language-guided unsupervised adaptation improve medical image classification using unpaired images and texts?cited by 2
- 2025Pre-trained Models Succeed in Medical Imaging with Representation Similarity Degradationcited by 2
- 2025Conformal uncertainty quantification to evaluate predictive fairness of foundation AI model for skin lesion classes across patient demographicscited by 2
- 2025DINO-MX: A Modular & Flexible Framework for Self-Supervised Learningcited by 2
- 2025Interpretable Similarity of Synthetic Image Utilitycited by 2
- 2024General Vision Encoder Features as Guidance in Medical Image Registrationcited by 1
- 2024The Inter-Intra Modal Measure: A Predictive Lens on Fine-Tuning Outcomes in Vision-Language Modelscited by 1
- 2024DINOv2 Rocks Geological Image Analysis: Classification, Segmentation, and Interpretabilitycited by 1
- 2024Medical Image Segmentation with SAM-generated Annotationscited by 1
- 2025Advancements in Medical Image Classification through Fine-Tuning Natural Domain Foundation Modelscited by 1
- 2025Deep Modeling and Optimization of Medical Image Classificationcited by 1
- 2025CardioBench: Do Echocardiography Foundation Models Generalize Beyond the Lab?cited by 1
- 2025TomoGraphView: 3D Medical Image Classification with Omnidirectional Slice Representations and Graph Neural Networkscited by 1
- 2026A Hierarchical Benchmark of Foundation Models for Dermatologycited by 1
- 2026Attend what matters: Leveraging vision foundational models for breast cancer classification using mammogramscited by 1
- 2026Foundation VAEs for 3D CT Reconstruction, Augmentation, and Generationcited by 1
- 2024Using Few-Shot Learning to Classify Primary Lung Cancer and Other Malignancy with Lung Metastasis in Cytological Imaging via Endobronchial Ultrasound Procedurescited by 0
- 2024Human-in-the-Loop Segmentation of Multi-species Coral Imagerycited by 0
- 2024Panoptic Segmentation of Mammograms with Text-To-Image Diffusion Modelcited by 0
- 2025Comparative Analysis of Pre-trained Deep Learning Models and DINOv2 for Cushing's Syndrome Diagnosis in Facial Analysiscited by 0
- 2025Efficient Self-Supervised Adaptation for Medical Image Analysiscited by 0
- 2025AI-Assisted Colonoscopy: Polyp Detection and Segmentation using Foundation Modelscited by 0
- 2025Learning What Helps: Task-Aligned Context Selection for Vision Taskscited by 0
- 2026Foundation Models for Medical Imaging: Status, Challenges, and Directionscited by 0
- 2026FederatedFactory: Generative One-Shot Learning for Extremely Non-IID Distributed Scenarioscited by 0
- 2026Are Natural-Domain Foundation Models Effective for Accelerated Cardiac MRI Reconstruction?cited by 0
- 2026Benchmarking transferability of SSL pretraining to same and different modality segmentation taskscited by 0
- 2026PEFT-MedSAM: Efficient Fine-Tuning of Medical Foundation Models for Explainable Skin Lesion Segmentationcited by 0
- 2026Localization Lens for Improving Medical Vision-Language Modelscited by 0
- 2026Beyond the Encoder: Object-Centric Representations Emerging from Segmentation Foundation Modelscited by 0
- 2026Beyond the Encoder: Object-Centric Representations Emerging from Segmentation Foundation Models13 Oct 2026
- 2026Localization Lens for Improving Medical Vision-Language Models3 Oct 2026
- 2026PEFT-MedSAM: Efficient Fine-Tuning of Medical Foundation Models for Explainable Skin Lesion Segmentation17 Jun 2026
- 2026Foundation VAEs for 3D CT Reconstruction, Augmentation, and Generation29 May 2026
- 2026Benchmarking transferability of SSL pretraining to same and different modality segmentation tasks18 May 2026
- 2026Are Natural-Domain Foundation Models Effective for Accelerated Cardiac MRI Reconstruction?24 Apr 2026
- 2026Attend what matters: Leveraging vision foundational models for breast cancer classification using mammograms21 Apr 2026
- 2026FederatedFactory: Generative One-Shot Learning for Extremely Non-IID Distributed Scenarios17 Mar 2026
- 2026Foundation Models for Medical Imaging: Status, Challenges, and Directions17 Feb 2026
- 2026A Hierarchical Benchmark of Foundation Models for Dermatology18 Jan 2026
- 2025Interpretable Similarity of Synthetic Image Utility18 Dec 2025
- 2025Learning What Helps: Task-Aligned Context Selection for Vision Tasks29 Nov 2025
34 more
- 2025TomoGraphView: 3D Medical Image Classification with Omnidirectional Slice Representations and Graph Neural Networks12 Nov 2025
- 2025DINO-MX: A Modular & Flexible Framework for Self-Supervised Learning3 Nov 2025
- 2025CardioBench: Do Echocardiography Foundation Models Generalize Beyond the Lab?1 Oct 2025
- 2025DinoAtten3D: Slice-Level Attention Aggregation of DinoV2 for 3D Brain MRI Anomaly Classification15 Sep 2025
- 2025General Methods Make Great Domain-specific Foundation Models: A Case-study on Fetal Ultrasound24 Jun 2025
- 2025Adapting Vision-Language Foundation Model for Next Generation Medical Ultrasound Image Analysis10 Jun 2025
- 2025Deep Modeling and Optimization of Medical Image Classification29 May 2025
- 2025Advancements in Medical Image Classification through Fine-Tuning Natural Domain Foundation Models26 May 2025
- 2025Boosting multi-demographic federated learning for chest radiograph analysis using general-purpose self-supervised representations11 Apr 2025
- 2025Order Matters: On Parameter-Efficient Image-to-Video Probing for Recognizing Nearly Symmetric Actions31 Mar 2025
- 2025AI-Assisted Colonoscopy: Polyp Detection and Segmentation using Foundation Models31 Mar 2025
- 2025Conformal uncertainty quantification to evaluate predictive fairness of foundation AI model for skin lesion classes across patient demographics31 Mar 2025
- 2025Efficient Self-Supervised Adaptation for Medical Image Analysis24 Mar 2025
- 2025Pre-trained Models Succeed in Medical Imaging with Representation Similarity Degradation11 Mar 2025
- 2025FAA-CLIP: Federated Adversarial Adaptation of CLIP26 Feb 2025
- 2025Comparative Analysis of Pre-trained Deep Learning Models and DINOv2 for Cushing's Syndrome Diagnosis in Facial Analysis21 Jan 2025
- 2024Medical Slice Transformer: Improved Diagnosis and Explainability on 3D Medical Images with DINOv224 Nov 2024
- 2024FACMIC: Federated Adaptative CLIP Model for Medical Image Classification8 Oct 2024
- 2024Towards a vision foundation model for comprehensive assessment of Cardiac MRI2 Oct 2024
- 2024Medical Image Segmentation with SAM-generated Annotations30 Sep 2024
- 2024How Effective is Pre-training of Large Masked Autoencoders for Downstream Earth Observation Tasks?27 Sep 2024
- 2024Can language-guided unsupervised adaptation improve medical image classification using unpaired images and texts?3 Sep 2024
- 2024A Federated Learning-Friendly Approach for Parameter-Efficient Fine-Tuning of SAM in 3D Segmentation31 Jul 2024
- 2024DINOv2 Rocks Geological Image Analysis: Classification, Segmentation, and Interpretability25 Jul 2024
- 2024Graph Neural Networks: A suitable Alternative to MLPs in Latent 3D Medical Image Classification?24 Jul 2024
- 2024The Inter-Intra Modal Measure: A Predictive Lens on Fine-Tuning Outcomes in Vision-Language Models22 Jul 2024
- 2024Panoptic Segmentation of Mammograms with Text-To-Image Diffusion Model19 Jul 2024
- 2024General Vision Encoder Features as Guidance in Medical Image Registration18 Jul 2024
- 2024Masked Image Modelling for retinal OCT understanding23 May 2024
- 2024Swin transformers are robust to distribution and concept drift in endoscopy-based longitudinal rectal cancer assessment6 May 2024
- 2024Human-in-the-Loop Segmentation of Multi-species Coral Imagery15 Apr 2024
- 2024Using Few-Shot Learning to Classify Primary Lung Cancer and Other Malignancy with Lung Metastasis in Cytological Imaging via Endobronchial Ultrasound Procedures9 Apr 2024
- 2024Comparative Analysis of ImageNet Pre-Trained Deep Learning Models and DINOv2 in Medical Imaging Classification12 Feb 2024
- 2024Exploring scalable medical image encoders beyond text supervision19 Jan 2024
- 2025Adapting Vision-Language Foundation Model for Next Generation Medical Ultrasound Image Analysiscited by 6
- 2025FAA-CLIP: Federated Adversarial Adaptation of CLIPcited by 5
- 2024The Inter-Intra Modal Measure: A Predictive Lens on Fine-Tuning Outcomes in Vision-Language Modelscited by 1
- 2026Localization Lens for Improving Medical Vision-Language Modelscited by 0
- 2026Localization Lens for Improving Medical Vision-Language Models3 Oct 2026
- 2025Adapting Vision-Language Foundation Model for Next Generation Medical Ultrasound Image Analysis10 Jun 2025
- 2025FAA-CLIP: Federated Adversarial Adaptation of CLIP26 Feb 2025
- 2024The Inter-Intra Modal Measure: A Predictive Lens on Fine-Tuning Outcomes in Vision-Language Models22 Jul 2024
- 2024Exploring scalable medical image encoders beyond text supervisioncited by 132
- 2024Comparative Analysis of ImageNet Pre-Trained Deep Learning Models and DINOv2 in Medical Imaging Classificationcited by 14
- 2024Towards a vision foundation model for comprehensive assessment of Cardiac MRIcited by 14
- 2024Medical Slice Transformer: Improved Diagnosis and Explainability on 3D Medical Images with DINOv2cited by 13
- 2024FACMIC: Federated Adaptative CLIP Model for Medical Image Classificationcited by 7
- 2025General Methods Make Great Domain-specific Foundation Models: A Case-study on Fetal Ultrasoundcited by 7
- 2025Boosting multi-demographic federated learning for chest radiograph analysis using general-purpose self-supervised representationscited by 6
- 2024A Federated Learning-Friendly Approach for Parameter-Efficient Fine-Tuning of SAM in 3D Segmentationcited by 5
- 2024How Effective is Pre-training of Large Masked Autoencoders for Downstream Earth Observation Tasks?cited by 5
- 2024Swin transformers are robust to distribution and concept drift in endoscopy-based longitudinal rectal cancer assessmentcited by 4
- 2024Graph Neural Networks: A suitable Alternative to MLPs in Latent 3D Medical Image Classification?cited by 4
- 2025Order Matters: On Parameter-Efficient Image-to-Video Probing for Recognizing Nearly Symmetric Actionscited by 3
12 most cited of 41 All 41 (JSON)
- 2026Beyond the Encoder: Object-Centric Representations Emerging from Segmentation Foundation Models13 Oct 2026
- 2026PEFT-MedSAM: Efficient Fine-Tuning of Medical Foundation Models for Explainable Skin Lesion Segmentation17 Jun 2026
- 2026Foundation VAEs for 3D CT Reconstruction, Augmentation, and Generation29 May 2026
- 2026Benchmarking transferability of SSL pretraining to same and different modality segmentation tasks18 May 2026
- 2026Are Natural-Domain Foundation Models Effective for Accelerated Cardiac MRI Reconstruction?24 Apr 2026
- 2026Attend what matters: Leveraging vision foundational models for breast cancer classification using mammograms21 Apr 2026
- 2026FederatedFactory: Generative One-Shot Learning for Extremely Non-IID Distributed Scenarios17 Mar 2026
- 2026Foundation Models for Medical Imaging: Status, Challenges, and Directions17 Feb 2026
- 2026A Hierarchical Benchmark of Foundation Models for Dermatology18 Jan 2026
- 2025Interpretable Similarity of Synthetic Image Utility18 Dec 2025
- 2025Learning What Helps: Task-Aligned Context Selection for Vision Tasks29 Nov 2025
- 2025TomoGraphView: 3D Medical Image Classification with Omnidirectional Slice Representations and Graph Neural Networks12 Nov 2025
12 newest of 41 All 41 (JSON)