DiffuseMorph: Unsupervised Deformable Image Registration Using Diffusion Model
On the map: Diffusion models → Medical imaging and segmentation
Abstract (arXiv)
Deformable image registration is one of the fundamental tasks in medical imaging. Classical registration algorithms usually require a high computational cost for iterative optimizations. Although deep-learning-based methods have been developed for fast image registration, it is still challenging to obtain realistic continuous deformations from a moving image to a fixed image with less topological folding problem. To address this, here we present a novel diffusion-model-based image registration method, called DiffuseMorph. DiffuseMorph not only generates synthetic deformed images through reverse diffusion but also allows image registration by deformation fields. Specifically, the deformation fields are generated by the conditional score function of the deformation between the moving and fixed images, so that the registration can be performed from continuous deformation by simply scaling the latent feature of the score. Experimental results on 2D facial and 3D medical image registration tasks demonstrate that our method provides flexible deformations with topology preservation capability.
Key facts. Cited by 57 papers in the map (data through 7 Oct 2026). Placed in Medical imaging and segmentation, one of 14 directions in Diffusion models. Builds on 31 of its 48 references that are in the map. First posted on arXiv 9 Dec 2021.
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31 of 48 references.
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Other references · 30
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- 2019Unsupervised Learning of Probabilistic Diffeomorphic Registration for Images and Surfacescited by 186
- 2018A Deep Learning Framework for Unsupervised Affine and Deformable Image Registrationcited by 160
- 2021Diff-TTS: A Denoising Diffusion Model for Text-to-Speechcited by 156
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- 2018Unsupervised Learning for Fast Probabilistic Diffeomorphic Registrationcited by 116
- 2017Quicksilver: Fast Predictive Image Registration - a Deep Learning Approachcited by 113
- 2020Fast Symmetric Diffeomorphic Image Registration with Convolutional Neural Networkscited by 107
- 2018Weakly-Supervised Convolutional Neural Networks for Multimodal Image Registrationcited by 90
- 2020CycleMorph: Cycle Consistent Unsupervised Deformable Image Registrationcited by 78
- 2019DeepAtlas: Joint Semi-Supervised Learning of Image Registration and Segmentationcited by 66
- 2018Unsupervised Probabilistic Deformation Modeling for Robust Diffeomorphic Registrationcited by 23
- 2018Deep Learning based Inter-Modality Image Registration Supervised by Intra-Modality Similaritycited by 16
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Citing papers per year: 2022: 3; 2023: 10; 2024: 21; 2025: 16; 2026: 7.
57 papers.
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- 2022Diffusion Models for Medical Image Analysis: A Comprehensive Surveycited by 269
- 2022A Survey on Generative Diffusion Modelcited by 238
- 2022SADM: Sequence-Aware Diffusion Model for Longitudinal Medical Image Generationcited by 56
- 2023A survey on deep learning in medical image registration: new technologies, uncertainty, evaluation metrics, and beyondcited by 55
- 2024Correlation-aware Coarse-to-fine MLPs for Deformable Medical Image Registrationcited by 37
- 2024Fast-DDPM: Fast Denoising Diffusion Probabilistic Models for Medical Image-to-Image Generationcited by 33
- 2023Diffusion Models for Contrast Harmonization of Magnetic Resonance Imagescited by 19
- 2023FSDiffReg: Feature-wise and Score-wise Diffusion-guided Unsupervised Deformable Image Registration for Cardiac Imagescited by 18
- 2024TADM: Temporally-Aware Diffusion Model for Neurodegenerative Progression on Brain MRIcited by 18
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- 2024Deep Generative Models for 3D Medical Image Synthesiscited by 14
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- 2024SimuScope: Realistic Endoscopic Synthetic Dataset Generation through Surgical Simulation and Diffusion Modelscited by 8
- 2025Learning Patient-Specific Disease Dynamics with Latent Flow Matching for Longitudinal Imaging Generationcited by 8
- 2023Denoising Diffusion Post-Processing for Low-Light Image Enhancementcited by 7
- 2024Deformation-Recovery Diffusion Model (DRDM): Instance Deformation for Image Manipulation and Synthesiscited by 7
- 2023AutoFuse: Automatic Fusion Networks for Deformable Medical Image Registrationcited by 6
- 2024DiffuseReg: Denoising Diffusion Model for Obtaining Deformation Fields in Unsupervised Deformable Image Registrationcited by 6
- 2025Improving Generalization of Medical Image Registration Foundation Modelcited by 6
- 2023A Recycling Training Strategy for Medical Image Segmentation with Diffusion Denoising Modelscited by 5
- 2024Bidirectional Recurrence for Cardiac Motion Tracking with Gaussian Process Latent Codingcited by 5
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- 2024TPIE: Topology-Preserved Image Editing With Text Instructionscited by 3
- 2025Deformable registration and generative modelling of aortic anatomies by auto-decoders and neural ODEscited by 3
- 2025Temporally-Aware Diffusion Model for Brain Progression Modelling with Bidirectional Temporal Regularisationcited by 3
- 2024Gaussian Primitives for Deformable Image Registrationcited by 2
- 2024Learning Geodesics of Geometric Shape Deformations From Imagescited by 2
- 2025CoRLD: Contrastive Representation Learning Of Deformable Shapes In Imagescited by 2
- 2024Learning Diffeomorphism for Image Registration with Time-Continuous Networks using Semigroup Regularizationcited by 1
- 2024CT-SDM: A Sampling Diffusion Model for Sparse-View CT Reconstruction across All Sampling Ratescited by 1
- 2024QID2: An Image-Conditioned Diffusion Model for Q-space Up-sampling of DWI Datacited by 1
- 2025Auto-regressive transformation for image alignmentcited by 1
- 2025Computationally Efficient Diffusion Models in Medical Imaging: A Comprehensive Reviewcited by 1
- 2025Dyna3DGR: 4D Cardiac Motion Tracking with Dynamic 3D Gaussian Representationcited by 1
- 2025Tumor Synthesis conditioned on Radiomicscited by 1
- 2026Trustworthy Longitudinal Brain MRI Completion: A Deformation-Based Approach with KAN-Enhanced Diffusion Modelcited by 1
- 2023Reconstruction of Patient-Specific Confounders in AI-based Radiologic Image Interpretation using Generative Pretrainingcited by 0
- 2024Key-point Guided Deformable Image Manipulation Using Diffusion Modelcited by 0
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- 2025BOTM: Echocardiography Segmentation via Bi-directional Optimal Token Matchingcited by 0
- 2025MR2US-Pro: Prostate MR to Ultrasound Image Translation and Registration Based on Diffusion Modelscited by 0
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- 2026Physics-Informed Conditional Diffusion for Motion-Robust Retinal Temporal Laser Speckle Contrast Imaging22 Apr 2026
- 2026Active Diffusion Matching: Score-based Iterative Alignment of Cross-Modal Retinal Images11 Apr 2026
- 2026Towards a Medical AI Scientist30 Mar 2026
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- 2025Multimodal Diffeomorphic Registration with Neural ODEs and Structural Descriptors27 Dec 2025
- 2025Plasticine: A Traceable Diffusion Model for Medical Image Translation20 Dec 2025
- 2025Masked Registration and Autoencoding of CT Images for Predictive Tibia Reconstruction10 Dec 2025
- 2025Learning Patient-Specific Disease Dynamics with Latent Flow Matching for Longitudinal Imaging Generation9 Dec 2025
- 2025AD-DAE: Alzheimer's Disease Progression Modeling with Unpaired Longitudinal MRI using Diffusion Auto-Encoders8 Nov 2025
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- 2025Tumor Synthesis conditioned on Radiomics29 Sep 2025
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- 2025PADReg: Physics-Aware Deformable Registration Guided by Contact Force for Ultrasound Sequences12 Aug 2025
- 2025Dyna3DGR: 4D Cardiac Motion Tracking with Dynamic 3D Gaussian Representation22 Jul 2025
- 2025Deformable registration and generative modelling of aortic anatomies by auto-decoders and neural ODEs1 Jun 2025
- 2025MR2US-Pro: Prostate MR to Ultrasound Image Translation and Registration Based on Diffusion Models31 May 2025
- 2025BOTM: Echocardiography Segmentation via Bi-directional Optimal Token Matching23 May 2025
- 2025Improving Generalization of Medical Image Registration Foundation Model10 May 2025
- 2025Computationally Efficient Diffusion Models in Medical Imaging: A Comprehensive Review9 May 2025
- 2025Auto-regressive transformation for image alignment8 May 2025
- 2025CoRLD: Contrastive Representation Learning Of Deformable Shapes In Images21 Mar 2025
- 2024SimuScope: Realistic Endoscopic Synthetic Dataset Generation through Surgical Simulation and Diffusion Models3 Dec 2024
- 2024TPIE: Topology-Preserved Image Editing With Text Instructions22 Nov 2024
- 2024Bidirectional Recurrence for Cardiac Motion Tracking with Gaussian Process Latent Coding28 Oct 2024
- 2024Learning Geodesics of Geometric Shape Deformations From Images24 Oct 2024
- 2024Deep Generative Models for 3D Medical Image Synthesis23 Oct 2024
- 2024DiffuseReg: Denoising Diffusion Model for Obtaining Deformation Fields in Unsupervised Deformable Image Registration7 Oct 2024
- 2024A Unified Deep Learning Framework for Motion Correction in Medical Imaging21 Sep 2024
- 2024QID2: An Image-Conditioned Diffusion Model for Q-space Up-sampling of DWI Data3 Sep 2024
- 2024CT-SDM: A Sampling Diffusion Model for Sparse-View CT Reconstruction across All Sampling Rates3 Sep 2024
- 2024Large Language Models for Multimodal Deformable Image Registration20 Aug 2024
- 2024Deformation-Recovery Diffusion Model (DRDM): Instance Deformation for Image Manipulation and Synthesis10 Jul 2024
- 2024TADM: Temporally-Aware Diffusion Model for Neurodegenerative Progression on Brain MRI18 Jun 2024
- 2024Gaussian Primitives for Deformable Image Registration5 Jun 2024
- 2024Correlation-aware Coarse-to-fine MLPs for Deformable Medical Image Registration31 May 2024
- 2024Learning Diffeomorphism for Image Registration with Time-Continuous Networks using Semigroup Regularization29 May 2024
- 2024Fast-DDPM: Fast Denoising Diffusion Probabilistic Models for Medical Image-to-Image Generation23 May 2024
- 2024Data-Efficient Unsupervised Interpolation Without Any Intermediate Frame for 4D Medical Images1 Apr 2024
- 2024Diff-Def: Diffusion-Generated Deformation Fields for Conditional Atlases25 Mar 2024
- 2024Medical Image Registration and Its Application in Retinal Images: A Review25 Mar 2024
- 2024StainDiffuser: MultiTask Dual Diffusion Model for Virtual Staining17 Mar 2024
- 2024Key-point Guided Deformable Image Manipulation Using Diffusion Model16 Jan 2024
- 2023Semantic Image Synthesis for Abdominal CT11 Dec 2023
- 2023Adaptive Correspondence Scoring for Unsupervised Medical Image Registration1 Dec 2023
- 2023A Survey of Emerging Applications of Diffusion Probabilistic Models in MRI19 Nov 2023
- 2023Reconstruction of Patient-Specific Confounders in AI-based Radiologic Image Interpretation using Generative Pretraining29 Sep 2023
- 2023AutoFuse: Automatic Fusion Networks for Deformable Medical Image Registration11 Sep 2023
- 2023A Recycling Training Strategy for Medical Image Segmentation with Diffusion Denoising Models30 Aug 2023
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- 2022Diffusion Models for Medical Image Analysis: A Comprehensive Surveycited by 269
- 2022A Survey on Generative Diffusion Modelcited by 238
- 2022SADM: Sequence-Aware Diffusion Model for Longitudinal Medical Image Generationcited by 56
- 2024Fast-DDPM: Fast Denoising Diffusion Probabilistic Models for Medical Image-to-Image Generationcited by 33
- 2023Diffusion Models for Contrast Harmonization of Magnetic Resonance Imagescited by 19
- 2023FSDiffReg: Feature-wise and Score-wise Diffusion-guided Unsupervised Deformable Image Registration for Cardiac Imagescited by 18
- 2024TADM: Temporally-Aware Diffusion Model for Neurodegenerative Progression on Brain MRIcited by 18
- 2023Semantic Image Synthesis for Abdominal CTcited by 10
- 2023A Survey of Emerging Applications of Diffusion Probabilistic Models in MRIcited by 9
- 2024SimuScope: Realistic Endoscopic Synthetic Dataset Generation through Surgical Simulation and Diffusion Modelscited by 8
- 2025Learning Patient-Specific Disease Dynamics with Latent Flow Matching for Longitudinal Imaging Generationcited by 8
- 2023Denoising Diffusion Post-Processing for Low-Light Image Enhancementcited by 7
12 most cited of 27 All 27 (JSON)
- 2026Atlases Are Already Inside: Recovering Population Templates from Pretrained Diffusion Models24 Sep 2026
- 2026Geodesic-informed Generative Diffusion Model For Topology-preserved Image Video Generation8 Sep 2026
- 2026Physics-Informed Conditional Diffusion for Motion-Robust Retinal Temporal Laser Speckle Contrast Imaging22 Apr 2026
- 2026Trustworthy Longitudinal Brain MRI Completion: A Deformation-Based Approach with KAN-Enhanced Diffusion Model14 Jan 2026
- 2025Plasticine: A Traceable Diffusion Model for Medical Image Translation20 Dec 2025
- 2025Learning Patient-Specific Disease Dynamics with Latent Flow Matching for Longitudinal Imaging Generation9 Dec 2025
- 2025Temporally-Aware Diffusion Model for Brain Progression Modelling with Bidirectional Temporal Regularisation3 Sep 2025
- 2025MR2US-Pro: Prostate MR to Ultrasound Image Translation and Registration Based on Diffusion Models31 May 2025
- 2025Computationally Efficient Diffusion Models in Medical Imaging: A Comprehensive Review9 May 2025
- 2024SimuScope: Realistic Endoscopic Synthetic Dataset Generation through Surgical Simulation and Diffusion Models3 Dec 2024
- 2024DiffuseReg: Denoising Diffusion Model for Obtaining Deformation Fields in Unsupervised Deformable Image Registration7 Oct 2024
- 2024QID2: An Image-Conditioned Diffusion Model for Q-space Up-sampling of DWI Data3 Sep 2024
12 newest of 27 All 27 (JSON)
- 2023A survey on deep learning in medical image registration: new technologies, uncertainty, evaluation metrics, and beyondcited by 55
- 2024Correlation-aware Coarse-to-fine MLPs for Deformable Medical Image Registrationcited by 37
- 2024Data-Efficient Unsupervised Interpolation Without Any Intermediate Frame for 4D Medical Imagescited by 15
- 2024Deep Generative Models for 3D Medical Image Synthesiscited by 14
- 2024StainDiffuser: MultiTask Dual Diffusion Model for Virtual Stainingcited by 11
- 2023Adaptive Correspondence Scoring for Unsupervised Medical Image Registrationcited by 9
- 2024Diff-Def: Diffusion-Generated Deformation Fields for Conditional Atlasescited by 8
- 2023AutoFuse: Automatic Fusion Networks for Deformable Medical Image Registrationcited by 6
- 2025Improving Generalization of Medical Image Registration Foundation Modelcited by 6
- 2024Bidirectional Recurrence for Cardiac Motion Tracking with Gaussian Process Latent Codingcited by 5
- 2026Towards a Medical AI Scientistcited by 5
- 2024Medical Image Registration and Its Application in Retinal Images: A Reviewcited by 3
12 most cited of 30 All 30 (JSON)
- 2026Two-Parameter Flow Map Learning for Continuous-Time Diffeomorphic Image Registration9 Sep 2026
- 2026Active Diffusion Matching: Score-based Iterative Alignment of Cross-Modal Retinal Images11 Apr 2026
- 2026Towards a Medical AI Scientist30 Mar 2026
- 2025Multimodal Diffeomorphic Registration with Neural ODEs and Structural Descriptors27 Dec 2025
- 2025Masked Registration and Autoencoding of CT Images for Predictive Tibia Reconstruction10 Dec 2025
- 2025AD-DAE: Alzheimer's Disease Progression Modeling with Unpaired Longitudinal MRI using Diffusion Auto-Encoders8 Nov 2025
- 2025Tumor Synthesis conditioned on Radiomics29 Sep 2025
- 2025PADReg: Physics-Aware Deformable Registration Guided by Contact Force for Ultrasound Sequences12 Aug 2025
- 2025Dyna3DGR: 4D Cardiac Motion Tracking with Dynamic 3D Gaussian Representation22 Jul 2025
- 2025Deformable registration and generative modelling of aortic anatomies by auto-decoders and neural ODEs1 Jun 2025
- 2025BOTM: Echocardiography Segmentation via Bi-directional Optimal Token Matching23 May 2025
- 2025Improving Generalization of Medical Image Registration Foundation Model10 May 2025
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