Pooling Architecture Search for Graph Classification
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Abstract (arXiv)
Graph classification is an important problem with applications across many domains, like chemistry and bioinformatics, for which graph neural networks (GNNs) have been state-of-the-art (SOTA) methods. GNNs are designed to learn node-level representation based on neighborhood aggregation schemes, and to obtain graph-level representation, pooling methods are applied after the aggregation operation in existing GNN models to generate coarse-grained graphs. However,due to highly diverse applications of graph classification, and the performance of existing pooling methods vary on different graphs. In other words, it is a challenging problem to design a universal pooling architecture to perform well in most cases, leading to a demand for data-specific pooling methods in real-world applications. To address this problem, we propose to use neural architecture search (NAS) to search for adaptive pooling architectures for graph classification. Firstly we designed a unified framework consisting of four modules: Aggregation, Pooling, Readout, and Merge, which can cover existing human-designed pooling methods for graph classification. Based on this framework, a novel search space is designed by incorporating popular operations in human-designed architectures. Then to enable efficient search, a coarsening strategy is proposed to continuously relax the search space, thus a differentiable search method can be adopted. Extensive experiments on six real-world datasets from three domains are conducted, and the results demonstrate the effectiveness and efficiency of the proposed framework.
Key facts. Cited by 36 papers in the map (data through 7 Oct 2026). Builds on 43 of its 60 references that are in the map. First posted on arXiv 24 Aug 2021.
Builds on
43 of 60 references.
References · 43
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- 2016Semi-Supervised Classification with Graph Convolutional Networkscited by 11,282
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31 more
- 2018Efficient Neural Architecture Search via Parameter Sharingcited by 831
- 2015Gated Graph Sequence Neural Networkscited by 792
- 2018Hierarchical Graph Representation Learning with Differentiable Poolingcited by 786
- 2019Graph U-Netscited by 489
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- 2019Single Path One-Shot Neural Architecture Search with Uniform Samplingcited by 411
- 2017Large-Scale Evolution of Image Classifierscited by 348
- 2018SNAS: Stochastic Neural Architecture Searchcited by 288
- 2019Searching for A Robust Neural Architecture in Four GPU Hourscited by 258
- 2019A Fair Comparison of Graph Neural Networks for Graph Classificationcited by 244
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- 2020Design Space for Graph Neural Networkscited by 182
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- 2019Auto-GNN: Neural Architecture Search of Graph Neural Networkscited by 73
- 2020Rethinking pooling in graph neural networkscited by 73
- 2019Learning Graph Convolutional Network for Skeleton-based Human Action Recognition by Neural Searchingcited by 70
- 2020Memory-Based Graph Networkscited by 56
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- 2020Simplifying Architecture Search for Graph Neural Networkcited by 27
- 2020AutoGraph: Automated Graph Neural Networkcited by 21
- 2020Graph Neural Network Architecture Search for Molecular Property Predictioncited by 17
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- 2021Efficient Data-specific Model Search for Collaborative Filteringcited by 3
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Citing papers per year: 2021: 3; 2022: 7; 2023: 10; 2024: 8; 2025: 6; 2026: 2.
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- 2023Graph Mixture of Experts: Learning on Large-Scale Graphs with Explicit Diversity Modelingcited by 63
- 2022Graph Pooling for Graph Neural Networks: Progress, Challenges, and Opportunitiescited by 52
- 2022NAS-Bench-Graph: Benchmarking Graph Neural Architecture Searchcited by 25
- 2021Distribution Knowledge Embedding for Graph Poolingcited by 19
- 2021Designing the Topology of Graph Neural Networks: A Novel Feature Fusion Perspectivecited by 19
- 2021AutoGEL: An Automated Graph Neural Network with Explicit Link Informationcited by 17
- 2024Graph Sparsification via Mixture of Graphscited by 17
- 2023LibAUC: A Deep Learning Library for X-Risk Optimizationcited by 15
- 2023Search to Fine-tune Pre-trained Graph Neural Networks for Graph-level Taskscited by 13
- 2023Improving Expressivity of GNNs with Subgraph-specific Factor Embedded Normalizationcited by 12
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24 more
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- 2024Towards Adaptive Neighborhood for Advancing Temporal Interaction Graph Modelingcited by 8
- 2023Search to Capture Long-range Dependency with Stacking GNNs for Graph Classificationcited by 7
- 2024Harnessing Large Language Models as Post-hoc Correctorscited by 7
- 2023State of the Art and Potentialities of Graph-level Learningcited by 6
- 2023A Versatile Graph Learning Approach through LLM-based Agentcited by 6
- 2024Unsupervised Graph Neural Architecture Search with Disentangled Self-supervisioncited by 5
- 2023On Exploring Node-feature and Graph-structure Diversities for Node Drop Graph Poolingcited by 4
- 2024Automatic Graph Topology-Aware Transformercited by 4
- 2022Graph Property Prediction on Open Graph Benchmark: A Winning Solution by Graph Neural Architecture Searchcited by 2
- 2025Towards Efficient Few-shot Graph Neural Architecture Search via Partitioning Gradient Contributioncited by 2
- 2025Intellectual Property in Graph-Based Machine Learning as a Service: Attacks and Defensescited by 2
- 2022Graph Neural Networks for Double-Strand DNA Breaks Predictioncited by 1
- 2024Proficient Graph Neural Network Design by Accumulating Knowledge on Large Language Modelscited by 1
- 2025Behavior Importance-Aware Graph Neural Architecture Search for Cross-Domain Recommendationcited by 1
- 2025Heterogeneous Graph Prompt Learning via Adaptive Weight Pruningcited by 1
- 2026Multi-RF Fusion with Multi-GNN Blending for Molecular Property Predictioncited by 1
- 2022Bridging the Gap of AutoGraph between Academia and Industry: Analysing AutoGraph Challenge at KDD Cup 2020cited by 0
- 2022Graph-level Neural Networks: Current Progress and Future Directionscited by 0
- 2024Causal-aware Graph Neural Architecture Search under Distribution Shiftscited by 0
- 2024Towards Understanding Link Predictor Generalizability Under Distribution Shiftscited by 0
- 2025NodeNAS: Node-Specific Graph Neural Architecture Search for Out-of-Distribution Generalizationcited by 0
- 2025Beyond Model Base Retrieval: Weaving Knowledge to Master Fine-grained Neural Network Designcited by 0
- 2026Learning from Historical Activations in Graph Neural Networkscited by 0
- 2026Multi-RF Fusion with Multi-GNN Blending for Molecular Property Prediction21 Mar 2026
- 2026Learning from Historical Activations in Graph Neural Networks3 Jan 2026
- 2025Intellectual Property in Graph-Based Machine Learning as a Service: Attacks and Defenses27 Aug 2025
- 2025Beyond Model Base Retrieval: Weaving Knowledge to Master Fine-grained Neural Network Design21 Jul 2025
- 2025Heterogeneous Graph Prompt Learning via Adaptive Weight Pruning12 Jul 2025
- 2025Towards Efficient Few-shot Graph Neural Architecture Search via Partitioning Gradient Contribution2 Jun 2025
- 2025Behavior Importance-Aware Graph Neural Architecture Search for Cross-Domain Recommendation11 Mar 2025
- 2025NodeNAS: Node-Specific Graph Neural Architecture Search for Out-of-Distribution Generalization4 Mar 2025
- 2024Proficient Graph Neural Network Design by Accumulating Knowledge on Large Language Models13 Aug 2024
- 2024Towards Adaptive Neighborhood for Advancing Temporal Interaction Graph Modeling14 Jun 2024
- 2024Towards Understanding Link Predictor Generalizability Under Distribution Shifts13 Jun 2024
- 2024Automatic Graph Topology-Aware Transformer30 May 2024
24 more
- 2024Causal-aware Graph Neural Architecture Search under Distribution Shifts26 May 2024
- 2024Graph Sparsification via Mixture of Graphs23 May 2024
- 2024Unsupervised Graph Neural Architecture Search with Disentangled Self-supervision8 Mar 2024
- 2024Harnessing Large Language Models as Post-hoc Correctors20 Feb 2024
- 2023A Versatile Graph Learning Approach through LLM-based Agent8 Sep 2023
- 2023Search to Fine-tune Pre-trained Graph Neural Networks for Graph-level Tasks14 Aug 2023
- 2023On Exploring Node-feature and Graph-structure Diversities for Node Drop Graph Pooling22 Jun 2023
- 2023LibAUC: A Deep Learning Library for X-Risk Optimization5 Jun 2023
- 2023Improving Expressivity of GNNs with Subgraph-specific Factor Embedded Normalization31 May 2023
- 2023Graph Mixture of Experts: Learning on Large-Scale Graphs with Explicit Diversity Modeling6 Apr 2023
- 2023AutoTransfer: AutoML with Knowledge Transfer -- An Application to Graph Neural Networks14 Mar 2023
- 2023Kernel Regression with Infinite-Width Neural Networks on Millions of Examples9 Mar 2023
- 2023Search to Capture Long-range Dependency with Stacking GNNs for Graph Classification17 Feb 2023
- 2023State of the Art and Potentialities of Graph-level Learning14 Jan 2023
- 2022Graph Property Prediction on Open Graph Benchmark: A Winning Solution by Graph Neural Architecture Search13 Jul 2022
- 2022NAS-Bench-Graph: Benchmarking Graph Neural Architecture Search18 Jun 2022
- 2022Graph-level Neural Networks: Current Progress and Future Directions31 May 2022
- 2022Graph Pooling for Graph Neural Networks: Progress, Challenges, and Opportunities15 Apr 2022
- 2022Bridging the Gap of AutoGraph between Academia and Industry: Analysing AutoGraph Challenge at KDD Cup 20206 Apr 2022
- 2022Graph Neural Networks for Double-Strand DNA Breaks Prediction4 Jan 2022
- 2022Automated Graph Machine Learning: Approaches, Libraries, Benchmarks and Directions4 Jan 2022
- 2021Designing the Topology of Graph Neural Networks: A Novel Feature Fusion Perspective29 Dec 2021
- 2021AutoGEL: An Automated Graph Neural Network with Explicit Link Information2 Dec 2021
- 2021Distribution Knowledge Embedding for Graph Pooling29 Sep 2021
- 2022Graph Pooling for Graph Neural Networks: Progress, Challenges, and Opportunitiescited by 52
- 2022NAS-Bench-Graph: Benchmarking Graph Neural Architecture Searchcited by 25
- 2021Distribution Knowledge Embedding for Graph Poolingcited by 19
- 2021Designing the Topology of Graph Neural Networks: A Novel Feature Fusion Perspectivecited by 19
- 2021AutoGEL: An Automated Graph Neural Network with Explicit Link Informationcited by 17
- 2023LibAUC: A Deep Learning Library for X-Risk Optimizationcited by 15
- 2023Search to Fine-tune Pre-trained Graph Neural Networks for Graph-level Taskscited by 13
- 2023Improving Expressivity of GNNs with Subgraph-specific Factor Embedded Normalizationcited by 12
- 2023Kernel Regression with Infinite-Width Neural Networks on Millions of Examplescited by 9
- 2022Automated Graph Machine Learning: Approaches, Libraries, Benchmarks and Directionscited by 8
- 2023AutoTransfer: AutoML with Knowledge Transfer -- An Application to Graph Neural Networkscited by 8
- 2024Towards Adaptive Neighborhood for Advancing Temporal Interaction Graph Modelingcited by 8
12 most cited of 33 All 33 (JSON)
- 2026Multi-RF Fusion with Multi-GNN Blending for Molecular Property Prediction21 Mar 2026
- 2026Learning from Historical Activations in Graph Neural Networks3 Jan 2026
- 2025Intellectual Property in Graph-Based Machine Learning as a Service: Attacks and Defenses27 Aug 2025
- 2025Beyond Model Base Retrieval: Weaving Knowledge to Master Fine-grained Neural Network Design21 Jul 2025
- 2025Heterogeneous Graph Prompt Learning via Adaptive Weight Pruning12 Jul 2025
- 2025Towards Efficient Few-shot Graph Neural Architecture Search via Partitioning Gradient Contribution2 Jun 2025
- 2025Behavior Importance-Aware Graph Neural Architecture Search for Cross-Domain Recommendation11 Mar 2025
- 2025NodeNAS: Node-Specific Graph Neural Architecture Search for Out-of-Distribution Generalization4 Mar 2025
- 2024Proficient Graph Neural Network Design by Accumulating Knowledge on Large Language Models13 Aug 2024
- 2024Towards Adaptive Neighborhood for Advancing Temporal Interaction Graph Modeling14 Jun 2024
- 2024Towards Understanding Link Predictor Generalizability Under Distribution Shifts13 Jun 2024
- 2024Automatic Graph Topology-Aware Transformer30 May 2024
12 newest of 33 All 33 (JSON)