Are Powerful Graph Neural Nets Necessary? A Dissection on Graph Classification
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Abstract (arXiv)
Graph Neural Nets (GNNs) have received increasing attentions, partially due to their superior performance in many node and graph classification tasks. However, there is a lack of understanding on what they are learning and how sophisticated the learned graph functions are. In this work, we propose a dissection of GNNs on graph classification into two parts: 1) the graph filtering, where graph-based neighbor aggregations are performed, and 2) the set function, where a set of hidden node features are composed for prediction. To study the importance of both parts, we propose to linearize them separately. We first linearize the graph filtering function, resulting Graph Feature Network (GFN), which is a simple lightweight neural net defined on a textitset of graph augmented features. Further linearization of GFN's set function results in Graph Linear Network (GLN), which is a linear function. Empirically we perform evaluations on common graph classification benchmarks. To our surprise, we find that, despite the simplification, GFN could match or exceed the best accuracies produced by recently proposed GNNs (with a fraction of computation cost), while GLN underperforms significantly. Our results demonstrate the importance of non-linear set function, and suggest that linear graph filtering with non-linear set function is an efficient and powerful scheme for modeling existing graph classification benchmarks.
Key facts. Cited by 39 papers in the map (data through 7 Oct 2026). First posted on arXiv 11 May 2019.
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Citing papers per year: 2021: 7; 2022: 10; 2023: 4; 2024: 11; 2025: 5; 2026: 2.
39 papers.
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- 2021Graph Contrastive Learning Automatedcited by 287
- 2022SimGRACE: A Simple Framework for Graph Contrastive Learning without Data Augmentationcited by 171
- 2021AutoGCL: Automated Graph Contrastive Learning via Learnable View Generatorscited by 73
- 2022Graph Pooling for Graph Neural Networks: Progress, Challenges, and Opportunitiescited by 52
- 2021Graph Neural Networks with Local Graph Parameterscited by 51
- 2022Graph Neural Networks are Inherently Good Generalizers: Insights by Bridging GNNs and MLPscited by 42
- 2021Pooling Architecture Search for Graph Classificationcited by 36
- 2022Bringing Your Own View: Graph Contrastive Learning without Prefabricated Data Augmentationscited by 28
- 2022Label-invariant Augmentation for Semi-Supervised Graph Classificationcited by 18
- 2023Curvature Filtrations for Graph Generative Model Evaluationcited by 18
- 2025No Metric to Rule Them All: Toward Principled Evaluations of Graph-Learning Datasetscited by 16
- 2022Graph Contrastive Learning with Personalized Augmentationcited by 14
27 more
- 2024Topology-aware Embedding Memory for Continual Learning on Expanding Networkscited by 14
- 2022Model-Aware Contrastive Learning: Towards Escaping the Dilemmascited by 11
- 2022DT+GNN: A Fully Explainable Graph Neural Network using Decision Treescited by 6
- 2024A Comprehensive Graph Pooling Benchmark: Effectiveness, Robustness and Generalizabilitycited by 6
- 2024Evolving to the Future: Unseen Event Adaptive Fake News Detection on Social Mediacited by 5
- 2024Multi-Scale Subgraph Contrastive Learningcited by 5
- 2024MuGSI: Distilling GNNs with Multi-Granularity Structural Information for Graph Classificationcited by 5
- 2024Graph Structure Refinement with Energy-based Contrastive Learningcited by 3
- 2025Graph Representation Learning with Massive Unlabeled Data for Rumor Detectioncited by 3
- 2021Sparsifying the Update Step in Graph Neural Networkscited by 2
- 2021Label Propagation across Graphs: Node Classification using Graph Neural Tangent Kernelscited by 2
- 2022Demystifying Bitcoin Address Behavior via Graph Neural Networkscited by 2
- 2023Calibrate and Boost Logical Expressiveness of GNN Over Multi-Relational and Temporal Graphscited by 2
- 2024Saliency-Aware Regularized Graph Neural Networkcited by 2
- 2026Bridging the Gap Between Hyperdimensional Computing and Kernel Methods via the Nystr"om Methodcited by 2
- 2023Multiscale Hodge Scattering Networks for Data Analysiscited by 1
- 2024Conditional Distribution Learning for Graph Classificationcited by 1
- 2021Ego-based Entropy Measures for Structural Representations on Graphscited by 0
- 2022Training Free Graph Neural Networks for Graph Matchingcited by 0
- 2023GGNNs : Generalizing GNNs using Residual Connections and Weighted Message Passingcited by 0
- 2024E2GNN: Efficient Graph Neural Network Ensembles for Semi-Supervised Classificationcited by 0
- 2024A Structural Feature-Based Approach for Comprehensive Graph Classificationcited by 0
- 2024Sparse Decomposition of Graph Neural Networkscited by 0
- 2025Physics-Informed Graph Neural Networks for Transverse Momentum Estimation in CMS Trigger Systemscited by 0
- 2025Adaptive Node Feature Selection For Graph Neural Networkscited by 0
- 2025Graph Contrastive Learning via Spectral Graph Alignmentcited by 0
- 2026Learning over Positive and Negative Edges with Contrastive Message Passingcited by 0
- 2026Bridging the Gap Between Hyperdimensional Computing and Kernel Methods via the Nystr"om Method7 Aug 2026
- 2026Learning over Positive and Negative Edges with Contrastive Message Passing18 May 2026
- 2025Graph Contrastive Learning via Spectral Graph Alignment27 Nov 2025
- 2025Adaptive Node Feature Selection For Graph Neural Networks3 Oct 2025
- 2025Graph Representation Learning with Massive Unlabeled Data for Rumor Detection6 Aug 2025
- 2025Physics-Informed Graph Neural Networks for Transverse Momentum Estimation in CMS Trigger Systems25 Jul 2025
- 2025No Metric to Rule Them All: Toward Principled Evaluations of Graph-Learning Datasets4 Feb 2025
- 2024Graph Structure Refinement with Energy-based Contrastive Learning20 Dec 2024
- 2024Conditional Distribution Learning for Graph Classification20 Nov 2024
- 2024Sparse Decomposition of Graph Neural Networks25 Oct 2024
- 2024A Structural Feature-Based Approach for Comprehensive Graph Classification10 Aug 2024
- 2024MuGSI: Distilling GNNs with Multi-Granularity Structural Information for Graph Classification28 Jun 2024
27 more
- 2024A Comprehensive Graph Pooling Benchmark: Effectiveness, Robustness and Generalizability13 Jun 2024
- 2024E2GNN: Efficient Graph Neural Network Ensembles for Semi-Supervised Classification6 May 2024
- 2024Multi-Scale Subgraph Contrastive Learning5 Mar 2024
- 2024Evolving to the Future: Unseen Event Adaptive Fake News Detection on Social Media29 Feb 2024
- 2024Topology-aware Embedding Memory for Continual Learning on Expanding Networks24 Jan 2024
- 2024Saliency-Aware Regularized Graph Neural Network1 Jan 2024
- 2023GGNNs : Generalizing GNNs using Residual Connections and Weighted Message Passing26 Nov 2023
- 2023Multiscale Hodge Scattering Networks for Data Analysis17 Nov 2023
- 2023Calibrate and Boost Logical Expressiveness of GNN Over Multi-Relational and Temporal Graphs3 Nov 2023
- 2023Curvature Filtrations for Graph Generative Model Evaluation30 Jan 2023
- 2022Graph Neural Networks are Inherently Good Generalizers: Insights by Bridging GNNs and MLPs18 Dec 2022
- 2022Demystifying Bitcoin Address Behavior via Graph Neural Networks26 Nov 2022
- 2022Graph Contrastive Learning with Personalized Augmentation14 Sep 2022
- 2022Model-Aware Contrastive Learning: Towards Escaping the Dilemmas16 Jul 2022
- 2022DT+GNN: A Fully Explainable Graph Neural Network using Decision Trees26 May 2022
- 2022Label-invariant Augmentation for Semi-Supervised Graph Classification19 May 2022
- 2022Graph Pooling for Graph Neural Networks: Progress, Challenges, and Opportunities15 Apr 2022
- 2022SimGRACE: A Simple Framework for Graph Contrastive Learning without Data Augmentation7 Feb 2022
- 2022Training Free Graph Neural Networks for Graph Matching14 Jan 2022
- 2022Bringing Your Own View: Graph Contrastive Learning without Prefabricated Data Augmentations4 Jan 2022
- 2021Label Propagation across Graphs: Node Classification using Graph Neural Tangent Kernels7 Oct 2021
- 2021AutoGCL: Automated Graph Contrastive Learning via Learnable View Generators21 Sep 2021
- 2021Sparsifying the Update Step in Graph Neural Networks2 Sep 2021
- 2021Pooling Architecture Search for Graph Classification24 Aug 2021
- 2021Graph Neural Networks with Local Graph Parameters12 Jun 2021
- 2021Graph Contrastive Learning Automated10 Jun 2021
- 2021Ego-based Entropy Measures for Structural Representations on Graphs17 Feb 2021
- 2021Graph Contrastive Learning Automatedcited by 287
- 2022SimGRACE: A Simple Framework for Graph Contrastive Learning without Data Augmentationcited by 171
- 2021AutoGCL: Automated Graph Contrastive Learning via Learnable View Generatorscited by 73
- 2022Graph Pooling for Graph Neural Networks: Progress, Challenges, and Opportunitiescited by 52
- 2021Graph Neural Networks with Local Graph Parameterscited by 51
- 2022Graph Neural Networks are Inherently Good Generalizers: Insights by Bridging GNNs and MLPscited by 42
- 2021Pooling Architecture Search for Graph Classificationcited by 36
- 2022Bringing Your Own View: Graph Contrastive Learning without Prefabricated Data Augmentationscited by 28
- 2022Label-invariant Augmentation for Semi-Supervised Graph Classificationcited by 18
- 2023Curvature Filtrations for Graph Generative Model Evaluationcited by 18
- 2025No Metric to Rule Them All: Toward Principled Evaluations of Graph-Learning Datasetscited by 16
- 2022Graph Contrastive Learning with Personalized Augmentationcited by 14
12 most cited of 39 All 39 (JSON)
- 2026Bridging the Gap Between Hyperdimensional Computing and Kernel Methods via the Nystr"om Method7 Aug 2026
- 2026Learning over Positive and Negative Edges with Contrastive Message Passing18 May 2026
- 2025Graph Contrastive Learning via Spectral Graph Alignment27 Nov 2025
- 2025Adaptive Node Feature Selection For Graph Neural Networks3 Oct 2025
- 2025Graph Representation Learning with Massive Unlabeled Data for Rumor Detection6 Aug 2025
- 2025Physics-Informed Graph Neural Networks for Transverse Momentum Estimation in CMS Trigger Systems25 Jul 2025
- 2025No Metric to Rule Them All: Toward Principled Evaluations of Graph-Learning Datasets4 Feb 2025
- 2024Graph Structure Refinement with Energy-based Contrastive Learning20 Dec 2024
- 2024Conditional Distribution Learning for Graph Classification20 Nov 2024
- 2024Sparse Decomposition of Graph Neural Networks25 Oct 2024
- 2024A Structural Feature-Based Approach for Comprehensive Graph Classification10 Aug 2024
- 2024MuGSI: Distilling GNNs with Multi-Granularity Structural Information for Graph Classification28 Jun 2024
12 newest of 39 All 39 (JSON)