A Survey on Graph Structure Learning: Progress and Opportunities
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Abstract (arXiv)
Graphs are widely used to describe real-world objects and their interactions. Graph Neural Networks (GNNs) as a de facto model for analyzing graphstructured data, are highly sensitive to the quality of the given graph structures. Therefore, noisy or incomplete graphs often lead to unsatisfactory representations and prevent us from fully understanding the mechanism underlying the system. In pursuit of an optimal graph structure for downstream tasks, recent studies have sparked an effort around the central theme of Graph Structure Learning (GSL), which aims to jointly learn an optimized graph structure and corresponding graph representations. In the presented survey, we broadly review recent progress in GSL methods. Specifically, we first formulate a general pipeline of GSL and review state-of-the-art methods classified by the way of modeling graph structures, followed by applications of GSL across domains. Finally, we point out some issues in current studies and discuss future directions.
Key facts. Cited by 70 papers in the map (data through 7 Oct 2026). Builds on 24 of its 52 references that are in the map. First posted on arXiv 4 Mar 2021.
Builds on
24 of 52 references.
References · 24
- 2015Deep Residual Learning for Image Recognitioncited by 51,809
- 2013Auto-Encoding Variational Bayescited by 3,980
- 2017Neural Message Passing for Quantum Chemistrycited by 3,460
- 2016Categorical Reparameterization with Gumbel-Softmaxcited by 2,708
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- 2020A Generalization of Transformer Networks to Graphscited by 653
- 2017Learning Sparse Neural Networks through L0 Regularizationcited by 571
- 2020Graph Contrastive Learning with Adaptive Augmentationcited by 519
- 2020Parameterized Explainer for Graph Neural Networkcited by 423
- 2019Diffusion Improves Graph Learningcited by 414
- 2020Graph Structure Learning for Robust Graph Neural Networkscited by 368
- 2018Adversarial Attack on Graph Structured Datacited by 300
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- 2019Learning Discrete Structures for Graph Neural Networkscited by 228
- 2020Iterative Deep Graph Learning for Graph Neural Networks: Better and Robust Node Embeddingscited by 212
- 2018Adaptive Graph Convolutional Neural Networkscited by 155
- 2016How to learn a graph from smooth signalscited by 146
- 2020Learning to Drop: Robust Graph Neural Network via Topological Denoisingcited by 127
- 2018Learning graphs from data: A signal representation perspectivecited by 119
- 2021SLAPS: Self-Supervision Improves Structure Learning for Graph Neural Networkscited by 108
- 2019Generating Classification Weights with GNN Denoising Autoencoders for Few-Shot Learningcited by 69
- 2018Attention Models in Graphs: A Surveycited by 41
- 2019Graph Representation Learning via Hard and Channel-Wise Attention Networkscited by 18
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Citing papers per year: 2022: 13; 2023: 14; 2024: 22; 2025: 10; 2026: 11.
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- 2022DiffWire: Inductive Graph Rewiring via the Lov'asz Boundcited by 79
- 2022A Survey on Deep Graph Generation: Methods and Applicationscited by 69
- 2022MolGenSurvey: A Systematic Survey in Machine Learning Models for Molecule Designcited by 66
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- 2023GSLB: The Graph Structure Learning Benchmarkcited by 49
- 2023Towards Understanding the Generalization of Graph Neural Networkscited by 41
- 2024A Comprehensive Survey on Data Augmentationcited by 38
- 2022T2-GNN: Graph Neural Networks for Graphs with Incomplete Features and Structure via Teacher-Student Distillationcited by 32
- 2022Modeling Multivariate Biosignals With Graph Neural Networks and Structured State Space Modelscited by 29
- 2024The Heterophilic Graph Learning Handbook: Benchmarks, Models, Theoretical Analysis, Applications and Challengescited by 29
- 2022Make Heterophily Graphs Better Fit GNN: A Graph Rewiring Approachcited by 23
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- 2023Molecular Property Prediction Based on Graph Structure Learningcited by 13
- 2024Graph Neural Networks for Tabular Data Learning: A Survey with Taxonomy and Directionscited by 13
- 2024Graph Neural Networks for Brain Graph Learning: A Surveycited by 13
- 2024Graph Neural Networks in Histopathology: Emerging Trends and Future Directionscited by 13
- 2024CTINexus: Automatic Cyber Threat Intelligence Knowledge Graph Construction Using Large Language Modelscited by 12
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- 2023Graph Convolution Based Efficient Re-Ranking for Visual Retrievalcited by 11
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- 2023STG4Traffic: A Survey and Benchmark of Spatial-Temporal Graph Neural Networks for Traffic Predictioncited by 7
- 2023Learning Time-aware Graph Structures for Spatially Correlated Time Series Forecastingcited by 7
- 2024DGDNN: Decoupled Graph Diffusion Neural Network for Stock Movement Predictioncited by 7
- 2024Beyond the Federation: Topology-aware Federated Learning for Generalization to Unseen Clientscited by 7
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- 2022Quant 4.0: Engineering Quantitative Investment with Automated, Explainable and Knowledge-driven Artificial Intelligencecited by 5
- 2022DynDepNet: Learning Time-Varying Dependency Structures from fMRI Data via Dynamic Graph Structure Learningcited by 4
- 2024Cross-Space Adaptive Filter: Integrating Graph Topology and Node Attributes for Alleviating the Over-smoothing Problemcited by 4
- 2023Contaminated Multivariate Time-Series Anomaly Detection with Spatio-Temporal Graph Conditional Diffusion Modelscited by 3
- 2024CNN2GNN: How to Bridge CNN with GNNcited by 3
- 2024Graph Structure Refinement with Energy-based Contrastive Learningcited by 3
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- 2025Persistent Homology-induced Graph Ensembles for Time Series Regressionscited by 3
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- 2024Geometric Graph Neural Network Modeling of Human Interactions in Crowded Environmentscited by 1
50 most cited of 70 All 70 (JSON)
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- 2026Edge Sparsification via Temporal Forman-Ricci Curvature for Dynamic Graph Learning7 Aug 2026
- 2026MPP-GNN: Subject-Adaptive Community Detection for fMRI-Based Alzheimer's Disease Classification29 Jul 2026
- 2026Blind Recovery of Latent Domains via Unsupervised Symmetry Discovery16 Jun 2026
- 2026Dynamic Elliptical Graph Factor Models via Riemannian Optimization with Geodesic Temporal Regularization18 May 2026
- 2026GOMA: Toward Structure-Driven Multimodal Alignment from a Graph Signal Smoothing Perspective15 May 2026
- 2026Deep Arguing11 May 2026
- 2026Model-to-Data Distillation for Graph Neural Networks7 May 2026
- 2026Dynamic Graph Structure Learning via Resistance Curvature Flow13 Jan 2026
- 2025Interpretable Graph-Language Modeling for Detecting Youth Illicit Drug Use11 Oct 2025
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- 2025GraphFLEx: Structure Learning Framework for Large Expanding Graphs18 May 2025
- 2025Bi-level Mean Field: Dynamic Grouping for Large-Scale MARL10 May 2025
- 2025Persistent Homology-induced Graph Ensembles for Time Series Regressions18 Mar 2025
- 2025Incomplete Graph Learning: A Comprehensive Survey18 Feb 2025
- 2025Deep Learning for Ophthalmology: The State-of-the-Art and Future Trends7 Jan 2025
- 2024Graph Structure Refinement with Energy-based Contrastive Learning20 Dec 2024
- 2024SAG-ViT: A Scale-Aware, High-Fidelity Patching Approach with Graph Attention for Vision Transformers14 Nov 2024
- 2024CTINexus: Automatic Cyber Threat Intelligence Knowledge Graph Construction Using Large Language Models28 Oct 2024
- 2024Geometric Graph Neural Network Modeling of Human Interactions in Crowded Environments22 Oct 2024
- 2024Recovering Time-Varying Networks From Single-Cell Data1 Oct 2024
- 2024Curb Your Attention: Causal Attention Gating for Robust Trajectory Prediction in Autonomous Driving23 Sep 2024
- 2024Learning to Model Graph Structural Information on MLPs via Graph Structure Self-Contrasting9 Sep 2024
- 2024The Heterophilic Graph Learning Handbook: Benchmarks, Models, Theoretical Analysis, Applications and Challenges12 Jul 2024
- 2024Beyond the Federation: Topology-aware Federated Learning for Generalization to Unseen Clients6 Jul 2024
- 2024Graph Neural Networks in Histopathology: Emerging Trends and Future Directions18 Jun 2024
- 2024Continual Traffic Forecasting via Mixture of Experts5 Jun 2024
- 2024Temporal Graph Learning Recurrent Neural Network for Traffic Forecasting4 Jun 2024
- 2024Graph Neural Networks for Brain Graph Learning: A Survey1 Jun 2024
- 2024A Comprehensive Survey on Data Augmentation15 May 2024
- 2024Learning Social Graph for Inactive User Recommendation8 May 2024
- 2024CNN2GNN: How to Bridge CNN with GNN23 Apr 2024
- 2024DSLR: Diversity Enhancement and Structure Learning for Rehearsal-based Graph Continual Learning21 Feb 2024
- 2024Active Learning for Graphs with Noisy Structures4 Feb 2024
- 2024A Comprehensive Survey on Graph Reduction: Sparsification, Coarsening, and Condensation29 Jan 2024
- 2024Cross-Space Adaptive Filter: Integrating Graph Topology and Node Attributes for Alleviating the Over-smoothing Problem26 Jan 2024
- 2024Graph Neural Networks for Tabular Data Learning: A Survey with Taxonomy and Directions4 Jan 2024
- 2024DGDNN: Decoupled Graph Diffusion Neural Network for Stock Movement Prediction3 Jan 2024
- 2023Molecular Property Prediction Based on Graph Structure Learning28 Dec 2023
- 2023Learning Time-aware Graph Structures for Spatially Correlated Time Series Forecasting27 Dec 2023
- 2023GSLB: The Graph Structure Learning Benchmark8 Oct 2023
- 2023Data-centric Graph Learning: A Survey8 Oct 2023
- 2023Everything Perturbed All at Once: Enabling Differentiable Graph Attacks29 Aug 2023
- 2023Contaminated Multivariate Time-Series Anomaly Detection with Spatio-Temporal Graph Conditional Diffusion Models24 Aug 2023
- 2023Graph Structural Residuals: A Learning Approach to Diagnosis14 Aug 2023
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- 2024Continual Traffic Forecasting via Mixture of Expertscited by 6
- 2024Continual Traffic Forecasting via Mixture of Experts5 Jun 2024
- 2022DiffWire: Inductive Graph Rewiring via the Lov'asz Boundcited by 79
- 2022A Survey on Deep Graph Generation: Methods and Applicationscited by 69
- 2022MolGenSurvey: A Systematic Survey in Machine Learning Models for Molecule Designcited by 66
- 2022Graph Data Augmentation for Graph Machine Learning: A Surveycited by 61
- 2024A Comprehensive Survey on Graph Reduction: Sparsification, Coarsening, and Condensationcited by 57
- 2023GSLB: The Graph Structure Learning Benchmarkcited by 49
- 2023Towards Understanding the Generalization of Graph Neural Networkscited by 41
- 2024A Comprehensive Survey on Data Augmentationcited by 38
- 2022T2-GNN: Graph Neural Networks for Graphs with Incomplete Features and Structure via Teacher-Student Distillationcited by 32
- 2024The Heterophilic Graph Learning Handbook: Benchmarks, Models, Theoretical Analysis, Applications and Challengescited by 29
- 2022Make Heterophily Graphs Better Fit GNN: A Graph Rewiring Approachcited by 23
- 2023Data-centric Graph Learning: A Surveycited by 22
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- 2026GSLAD: Prototype-Regularized Graph Structure Learning for Multivariate Time Series Anomaly Detection14 Sep 2026
- 2026From topology learning to graph generation: A unifying perspective2 Sep 2026
- 2026AutoGrable: What Is a Good Graph for a Table?11 Aug 2026
- 2026Edge Sparsification via Temporal Forman-Ricci Curvature for Dynamic Graph Learning7 Aug 2026
- 2026MPP-GNN: Subject-Adaptive Community Detection for fMRI-Based Alzheimer's Disease Classification29 Jul 2026
- 2026Blind Recovery of Latent Domains via Unsupervised Symmetry Discovery16 Jun 2026
- 2026Dynamic Elliptical Graph Factor Models via Riemannian Optimization with Geodesic Temporal Regularization18 May 2026
- 2026GOMA: Toward Structure-Driven Multimodal Alignment from a Graph Signal Smoothing Perspective15 May 2026
- 2026Deep Arguing11 May 2026
- 2026Model-to-Data Distillation for Graph Neural Networks7 May 2026
- 2026Dynamic Graph Structure Learning via Resistance Curvature Flow13 Jan 2026
- 2025Interpretable Graph-Language Modeling for Detecting Youth Illicit Drug Use11 Oct 2025
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