mlsanityData to 7 Oct 2026

Parameterized Explainer for Graph Neural Network

arXiv 2011.04573 ↗First posted 9 Nov 2020cs.LG cs.AIcited by 423

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Abstract (arXiv)

Despite recent progress in Graph Neural Networks (GNNs), explaining predictions made by GNNs remains a challenging open problem. The leading method independently addresses the local explanations (i.e., important subgraph structure and node features) to interpret why a GNN model makes the prediction for a single instance, e.g. a node or a graph. As a result, the explanation generated is painstakingly customized for each instance. The unique explanation interpreting each instance independently is not sufficient to provide a global understanding of the learned GNN model, leading to a lack of generalizability and hindering it from being used in the inductive setting. Besides, as it is designed for explaining a single instance, it is challenging to explain a set of instances naturally (e.g., graphs of a given class). In this study, we address these key challenges and propose PGExplainer, a parameterized explainer for GNNs. PGExplainer adopts a deep neural network to parameterize the generation process of explanations, which enables PGExplainer a natural approach to explaining multiple instances collectively. Compared to the existing work, PGExplainer has better generalization ability and can be utilized in an inductive setting easily. Experiments on both synthetic and real-life datasets show highly competitive performance with up to 24.7% relative improvement in AUC on explaining graph classification over the leading baseline.

Key facts. Cited by 423 papers in the map (data through 7 Oct 2026). First posted on arXiv 9 Nov 2020.

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Citing papers per year: 2021: 32; 2022: 79; 2023: 93; 2024: 82; 2025: 67; 2026: 70.

423 papers.

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  1. 2022From Anecdotal Evidence to Quantitative Evaluation Methods: A Systematic Review on Evaluating Explainable AIcited by 299
  2. 2021On Explainability of Graph Neural Networks via Subgraph Explorationscited by 280
  3. 2021Adversarial Graph Augmentation to Improve Graph Contrastive Learningcited by 200
  4. 2022Discovering Invariant Rationales for Graph Neural Networkscited by 186
  5. 2022Graph Neural Networks for Graphs with Heterophily: A Surveycited by 175
  6. 2022Interpretable and Generalizable Graph Learning via Stochastic Attention Mechanismcited by 171
  7. 2023A Survey on Graph Neural Networks for Time Series: Forecasting, Classification, Imputation, and Anomaly Detectioncited by 145
  8. 2022Learning Causally Invariant Representations for Out-of-Distribution Generalization on Graphscited by 144
  9. 2021Generative Causal Explanations for Graph Neural Networkscited by 124
  10. 2021CF-GNNExplainer: Counterfactual Explanations for Graph Neural Networkscited by 118
  11. 2022A Comprehensive Survey on Trustworthy Graph Neural Networks: Privacy, Robustness, Fairness, and Explainabilitycited by 118
  12. 2021Interpretable Deep Learning: Interpretation, Interpretability, Trustworthiness, and Beyondcited by 116
38 more
  1. 2022XAI for Transformers: Better Explanations through Conservative Propagationcited by 100
  2. 2021ProtGNN: Towards Self-Explaining Graph Neural Networkscited by 96
  3. 2021Trustworthy AI: A Computational Perspectivecited by 93
  4. 2022Trustworthy Graph Neural Networks: Aspects, Methods and Trendscited by 88
  5. 2022Evaluating Explainability for Graph Neural Networkscited by 85
  6. 2022Debiasing Graph Neural Networks via Learning Disentangled Causal Substructurecited by 83
  7. 2022Learning and Evaluating Graph Neural Network Explanations based on Counterfactual and Factual Reasoningcited by 78
  8. 2021DIG: A Turnkey Library for Diving into Graph Deep Learning Researchcited by 76
  9. 2021Towards Self-Explainable Graph Neural Networkcited by 75
  10. 2021Robust Counterfactual Explanations on Graph Neural Networkscited by 72
  11. 2021A Survey on Graph Structure Learning: Progress and Opportunitiescited by 70
  12. 2021Generalizing Graph Neural Networks on Out-Of-Distribution Graphscited by 69
  13. 2024Position: Topological Deep Learning is the New Frontier for Relational Learningcited by 65
  14. 2022Global Explainability of GNNs via Logic Combination of Learned Conceptscited by 64
  15. 2021GraphSVX: Shapley Value Explanations for Graph Neural Networkscited by 63
  16. 2023Graph Neural Networks for temporal graphs: State of the art, open challenges, and opportunitiescited by 60
  17. 2022Interpretable Graph Neural Networks for Connectome-Based Brain Disorder Analysiscited by 58
  18. 2022GraphFramEx: Towards Systematic Evaluation of Explainability Methods for Graph Neural Networkscited by 57
  19. 2023Time Series Contrastive Learning with Information-Aware Augmentationscited by 52
  20. 2025PyG 2.0: Scalable Learning on Real World Graphscited by 49
  21. 2023Histopathology Whole Slide Image Analysis with Heterogeneous Graph Representation Learningcited by 47
  22. 2021Improving Subgraph Recognition with Variational Graph Information Bottleneckcited by 45
  23. 2022GStarX: Explaining Graph Neural Networks with Structure-Aware Cooperative Gamescited by 42
  24. 2023Does Invariant Graph Learning via Environment Augmentation Learn Invariance?cited by 42
  25. 2021A Survey on Graph-Based Deep Learning for Computational Histopathologycited by 41
  26. 2023Towards Understanding the Generalization of Graph Neural Networkscited by 41
  27. 2023Towards Self-Interpretable Graph-Level Anomaly Detectioncited by 41
  28. 2022Spectral Augmentation for Self-Supervised Learning on Graphscited by 38
  29. 2021Probing GNN Explainers: A Rigorous Theoretical and Empirical Analysis of GNN Explanation Methodscited by 36
  30. 2021GCExplainer: Human-in-the-Loop Concept-based Explanations for Graph Neural Networkscited by 35
  31. 2022Graph-DETR3D: Rethinking Overlapping Regions for Multi-View 3D Object Detectioncited by 35
  32. 2023The expressive power of pooling in Graph Neural Networkscited by 35
  33. 2021Zorro: Valid, Sparse, and Stable Explanations in Graph Neural Networkscited by 34
  34. 2022Reinforced Causal Explainer for Graph Neural Networkscited by 34
  35. 2022GNNInterpreter: A Probabilistic Generative Model-Level Explanation for Graph Neural Networkscited by 34
  36. 2022Explaining the Explainers in Graph Neural Networks: a Comparative Studycited by 34
  37. 2022OrphicX: A Causality-Inspired Latent Variable Model for Interpreting Graph Neural Networkscited by 33
  38. 2024Graph Machine Learning in the Era of Large Language Models (LLMs)cited by 33

50 most cited of 423 All 423 (JSON)