Set Functions for Time Series
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Abstract (arXiv)
Despite the eminent successes of deep neural networks, many architectures are often hard to transfer to irregularly-sampled and asynchronous time series that commonly occur in real-world datasets, especially in healthcare applications. This paper proposes a novel approach for classifying irregularly-sampled time series with unaligned measurements, focusing on high scalability and data efficiency. Our method SeFT (Set Functions for Time Series) is based on recent advances in differentiable set function learning, extremely parallelizable with a beneficial memory footprint, thus scaling well to large datasets of long time series and online monitoring scenarios. Furthermore, our approach permits quantifying per-observation contributions to the classification outcome. We extensively compare our method with existing algorithms on multiple healthcare time series datasets and demonstrate that it performs competitively whilst significantly reducing runtime.
Key facts. Cited by 138 papers in the map (data through 14 Oct 2026). First posted on arXiv 26 Sep 2019.
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Citing papers per year: 2021: 13; 2022: 12; 2023: 26; 2024: 28; 2025: 30; 2026: 29.
138 papers.
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- 2022Self-Supervised Contrastive Pre-Training For Time Series via Time-Frequency Consistencycited by 250
- 2021Multi-Time Attention Networks for Irregularly Sampled Time Seriescited by 238
- 2022SAITS: Self-Attention-based Imputation for Time Seriescited by 169
- 2021Graph-Guided Network for Irregularly Sampled Multivariate Time Seriescited by 111
- 2021Modeling Irregular Time Series with Continuous Recurrent Unitscited by 103
- 2021Self-Supervised Transformer for Sparse and Irregularly Sampled Multivariate Clinical Time-Seriescited by 96
- 2023Time Series as Images: Vision Transformer for Irregularly Sampled Time Seriescited by 79
- 2024FuseMoE: Mixture-of-Experts Transformers for Fleximodal Fusioncited by 68
- 2021Closed-form Continuous-time Neural Modelscited by 65
- 2023Asynchrony-Robust Collaborative Perception via Bird's Eye View Flowcited by 58
- 2023Warpformer: A Multi-scale Modeling Approach for Irregular Clinical Time Seriescited by 55
- 2025Rethinking Irregular Time Series Forecasting: A Simple yet Effective Baselinecited by 55
38 more
- 2021HiRID-ICU-Benchmark -- A Comprehensive Machine Learning Benchmark on High-resolution ICU Datacited by 39
- 2022Improving Medical Predictions by Irregular Multimodal Electronic Health Records Modelingcited by 33
- 2021Neighborhood Contrastive Learning Applied to Online Patient Monitoringcited by 32
- 2021NRTSI: Non-Recurrent Time Series Imputationcited by 25
- 2023Learning Missing Modal Electronic Health Records with Unified Multi-modal Data Embedding and Modality-Aware Attentioncited by 25
- 2023Probabilistic Imputation for Time-series Classification with Missing Datacited by 22
- 2023Irregular Traffic Time Series Forecasting Based on Asynchronous Spatio-Temporal Graph Convolutional Networkcited by 20
- 2023Latent SDEs on Homogeneous Spacescited by 16
- 2025HyperIMTS: Hypergraph Neural Network for Irregular Multivariate Time Series Forecastingcited by 15
- 2022Temporal Label Smoothing for Early Event Predictioncited by 12
- 2025Time Series Language Model for Descriptive Caption Generationcited by 11
- 2022Learning Neural Set Functions Under the Optimal Subset Oraclecited by 10
- 2022Stop&Hop: Early Classification of Irregular Time Seriescited by 10
- 2022On the Importance of Clinical Notes in Multi-modal Learning for EHR Datacited by 10
- 2024TimeCHEAT: A Channel Harmony Strategy for Irregularly Sampled Multivariate Time Series Analysiscited by 10
- 2024A Systematic Literature Review of Spatio-Temporal Graph Neural Network Models for Time Series Forecasting and Classificationcited by 9
- 2026Bridging Time and Frequency: A Joint Modeling Framework for Irregular Multivariate Time Series Forecastingcited by 9
- 2024TimEHR: Image-based Time Series Generation for Electronic Health Recordscited by 8
- 2024SMART: Towards Pre-trained Missing-Aware Model for Patient Health Status Predictioncited by 8
- 2025ASTGI: Adaptive Spatio-Temporal Graph Interactions for Irregular Multivariate Time Series Forecastingcited by 8
- 2022RIPPLE: Concept-Based Interpretation for Raw Time Series Models in Educationcited by 7
- 2024EBES: Easy Benchmarking for Event Sequencescited by 7
- 2022Tripletformer for Probabilistic Interpolation of Irregularly sampled Time Seriescited by 6
- 2023Revisiting the Encoding of Satellite Image Time Seriescited by 6
- 2024CTPD: Cross-Modal Temporal Pattern Discovery for Enhanced Multimodal Electronic Health Records Analysiscited by 6
- 2025Revitalizing Canonical Pre-Alignment for Irregular Multivariate Time Series Forecastingcited by 6
- 2023IVP-VAE: Modeling EHR Time Series with Initial Value Problem Solverscited by 5
- 2023Time-Parameterized Convolutional Neural Networks for Irregularly Sampled Time Seriescited by 5
- 2023On the Importance of Step-wise Embeddings for Heterogeneous Clinical Time-Seriescited by 5
- 2024Dynamic Survival Analysis for Early Event Predictioncited by 5
- 2024EMIT- Event-Based Masked Auto Encoding for Irregular Time Seriescited by 5
- 2025LAST SToP For Modeling Asynchronous Time Seriescited by 5
- 2022DCSF: Deep Convolutional Set Functions for Classification of Asynchronous Time Seriescited by 4
- 2023TimelyGPT: Extrapolatable Transformer Pre-training for Long-term Time-Series Forecasting in Healthcarecited by 4
- 2024Irregularity-Informed Time Series Analysis: Adaptive Modelling of Spatial and Temporal Dynamicscited by 4
- 2024Towards Foundation Models for Critical Care Time Seriescited by 4
- 2023A Preference-aware Meta-optimization Framework for Personalized Vehicle Energy Consumption Estimationcited by 3
- 2023PAITS: Pretraining and Augmentation for Irregularly-Sampled Time Seriescited by 3
50 most cited of 138 All 138 (JSON)
- 2026QiYao-I: A Manifold Based Foundation Model for Irregular Multivariate Time Series Forecasting3 Oct 2026
- 2026BITS: Rethinking Fair and Comprehensive Evaluation for Irregular Time Series Forecasting27 Sep 2026
- 2026Domain Generalization under Sampling Pattern Shifts in Irregular Time Series27 Sep 2026
- 2026ChronoFlow: Hierarchical Flow Matching for Irregular Time Series Generation27 Sep 2026
- 2026Multimodal Prompt Learning with Irregular EHRs for Robust Monitoring of Critical Care Patients22 Aug 2026
- 2026L'evy Attention: Single-Pass Predictive Uncertainty for Continuous-Time Attention19 Aug 2026
- 2026Beyond MSE: Rethinking the Evaluation Metric and Benchmarking for Irregular Time Series Forecasting18 Aug 2026
- 2026Rethinking Irregular Time Series Forecasting from the Perspective of Basis Functions18 Aug 2026
- 2026GARLIC: Graph Attention-based Relational Learning of Multivariate Time Series in Intensive Care11 Aug 2026
- 2026DoctorAgents: an agentic framework to iteratively refine AutoML pipeline for small clinical temporal data5 Aug 2026
- 2026EvtGraph: Event-Adaptive Compression for Sparse Temporal Graph Learning in Multimodal Time Series5 Aug 2026
- 2026Enhancing Irregular Time Series Forecasting with Continuous-Time Modeling Framework30 Jul 2026
38 more
- 2026MissHyper: Restoring Clinical Synchronicity in Missingness-Guided Hypergraph Forecasting24 Jul 2026
- 2026Missingness as Signal: Channel-Independent Spectrogram Learning for Clinical Time Series Prediction3 Jul 2026
- 2026Improving Patient Subtyping on Longitudinal Data using Representations from Mamba-based Architecture26 Jun 2026
- 2026TRIAGE: Dialectical Reasoning for Explainable Risk Prediction on Irregularly Sampled Medical Time Series with LLMs8 Jun 2026
- 2026LongMoE: Longitudinal Multimodal Learning via Trajectory-Aware Mixture-of-Experts6 Jun 2026
- 2026Online Irregular Multivariate Time Series Forecasting via Uncertainty-Driven Dual-Expert Calibration27 May 2026
- 2026QuITE: Query-Based Irregular Time Series Embedding27 May 2026
- 2026Learning to Select Source-Traceable Evidence for Language-Model Prediction from Irregular Clinical Time Series19 May 2026
- 2026MILM: Large Language Models for Multimodal Irregular Time Series with Informative Sampling13 May 2026
- 2026ReTAMamba: Reliability-Aware Temporal Aggregation with Mamba for Irregular Clinical Time Series Prediction11 May 2026
- 2026DBGL: Decay-aware Bipartite Graph Learning for Irregular Medical Time Series Classification12 Apr 2026
- 2026MM-ISTS: Cooperating Irregularly Sampled Time Series Forecasting with Multimodal Vision-Text LLMs6 Mar 2026
- 2026Learning Recursive Multi-Scale Representations for Irregular Multivariate Time Series Forecasting25 Feb 2026
- 2026A Statistical Approach for Modeling Irregular Multivariate Time Series with Missing Observations23 Feb 2026
- 2026Structure-Aware Set Transformers: Temporal and Variable-Type Attention Biases for Asynchronous Clinical Time Series18 Feb 2026
- 2026Learning Representations from Incomplete EHR Data with Dual-Masked Autoencoding16 Feb 2026
- 2026Bridging Time and Frequency: A Joint Modeling Framework for Irregular Multivariate Time Series Forecasting31 Jan 2026
- 2025FlowPath: Learning Data-Driven Manifolds with Invertible Flows for Robust Irregularly-sampled Time Series Classification13 Nov 2025
- 2025Beyond Observations: Reconstruction Error-Guided Irregularly Sampled Time Series Representation Learning10 Nov 2025
- 2025EMR-AGENT: Automating Cohort and Feature Extraction from EMR Databases1 Oct 2025
- 2025HyMaTE: A Hybrid Mamba and Transformer Model for EHR Representation Learning28 Sep 2025
- 2025Graph Mixing Additive Networks28 Sep 2025
- 2025ASTGI: Adaptive Spatio-Temporal Graph Interactions for Irregular Multivariate Time Series Forecasting27 Sep 2025
- 2025Mind the Missing: Variable-Aware Representation Learning for Irregular EHR Time Series using Large Language Models26 Sep 2025
- 2025Towards Self-Supervised Foundation Models for Critical Care Time Series24 Sep 2025
- 2025Compositionality in Time Series: A Proof of Concept using Symbolic Dynamics and Compositional Data Augmentation28 Aug 2025
- 2025Bi-Axial Transformers: Addressing the Increasing Complexity of EHR Classification17 Aug 2025
- 2025Early Detection of Pancreatic Cancer Using Multimodal Learning on Electronic Health Records8 Aug 2025
- 2025Revitalizing Canonical Pre-Alignment for Irregular Multivariate Time Series Forecasting4 Aug 2025
- 2025DeltaSHAP: Explaining Prediction Evolutions in Online Patient Monitoring with Shapley Values3 Jul 2025
- 2025Towards Robust Real-World Multivariate Time Series Forecasting: A Unified Framework for Dependency, Asynchrony, and Missingness10 Jun 2025
- 2025IMTS is Worth Time × Channel Patches: Visual Masked Autoencoders for Irregular Multivariate Time Series Prediction28 May 2025
- 2025SuperMAN: Interpretable and Expressive Networks over Temporally Sparse Heterogeneous Data25 May 2025
- 2025HyperIMTS: Hypergraph Neural Network for Irregular Multivariate Time Series Forecasting23 May 2025
- 2025Rethinking Irregular Time Series Forecasting: A Simple yet Effective Baseline16 May 2025
- 2025A Set-Sequence Model for Time Series16 May 2025
- 2025STRGCN: Capturing Asynchronous Spatio-Temporal Dependencies for Irregular Multivariate Time Series Forecasting7 May 2025
- 2025Unlocking the Potential of Linear Networks for Irregular Multivariate Time Series Forecasting1 May 2025
50 newest of 138 All 138 (JSON)
- 2022Self-Supervised Contrastive Pre-Training For Time Series via Time-Frequency Consistencycited by 250
- 2021Multi-Time Attention Networks for Irregularly Sampled Time Seriescited by 238
- 2022SAITS: Self-Attention-based Imputation for Time Seriescited by 169
- 2021Graph-Guided Network for Irregularly Sampled Multivariate Time Seriescited by 111
- 2021Modeling Irregular Time Series with Continuous Recurrent Unitscited by 103
- 2021Self-Supervised Transformer for Sparse and Irregularly Sampled Multivariate Clinical Time-Seriescited by 96
- 2023Time Series as Images: Vision Transformer for Irregularly Sampled Time Seriescited by 79
- 2021Closed-form Continuous-time Neural Modelscited by 65
- 2023Asynchrony-Robust Collaborative Perception via Bird's Eye View Flowcited by 58
- 2023Warpformer: A Multi-scale Modeling Approach for Irregular Clinical Time Seriescited by 55
- 2025Rethinking Irregular Time Series Forecasting: A Simple yet Effective Baselinecited by 55
- 2021HiRID-ICU-Benchmark -- A Comprehensive Machine Learning Benchmark on High-resolution ICU Datacited by 39
12 most cited of 131 All 131 (JSON)
- 2026QiYao-I: A Manifold Based Foundation Model for Irregular Multivariate Time Series Forecasting3 Oct 2026
- 2026BITS: Rethinking Fair and Comprehensive Evaluation for Irregular Time Series Forecasting27 Sep 2026
- 2026Domain Generalization under Sampling Pattern Shifts in Irregular Time Series27 Sep 2026
- 2026Multimodal Prompt Learning with Irregular EHRs for Robust Monitoring of Critical Care Patients22 Aug 2026
- 2026L'evy Attention: Single-Pass Predictive Uncertainty for Continuous-Time Attention19 Aug 2026
- 2026Beyond MSE: Rethinking the Evaluation Metric and Benchmarking for Irregular Time Series Forecasting18 Aug 2026
- 2026Rethinking Irregular Time Series Forecasting from the Perspective of Basis Functions18 Aug 2026
- 2026GARLIC: Graph Attention-based Relational Learning of Multivariate Time Series in Intensive Care11 Aug 2026
- 2026EvtGraph: Event-Adaptive Compression for Sparse Temporal Graph Learning in Multimodal Time Series5 Aug 2026
- 2026Enhancing Irregular Time Series Forecasting with Continuous-Time Modeling Framework30 Jul 2026
- 2026MissHyper: Restoring Clinical Synchronicity in Missingness-Guided Hypergraph Forecasting24 Jul 2026
- 2026Missingness as Signal: Channel-Independent Spectrogram Learning for Clinical Time Series Prediction3 Jul 2026
12 newest of 131 All 131 (JSON)