mlsanityData to 7 Oct 2026

On Large-scale Evaluation of Embedding Models for Knowledge Graph Completion

arXiv 2504.08970 ↗First posted 11 Apr 2025cs.LG cs.AIcited by 2

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Abstract (arXiv)

Knowledge graph embedding (KGE) models are extensively studied for knowledge graph completion, yet their evaluation remains constrained by unrealistic benchmarks. Standard evaluation metrics rely on the closed-world assumption, which penalizes models for correctly predicting missing triples, contradicting the fundamental goals of link prediction. These metrics often compress accuracy assessment into a single value, obscuring models' specific strengths and weaknesses. The prevailing evaluation protocol, link prediction, operates under the unrealistic assumption that an entity's properties, for which values are to be predicted, are known in advance. While alternative protocols such as property prediction, entity-pair ranking, and triple classification address some of these limitations, they remain underutilized. Moreover, commonly used datasets are either faulty or too small to reflect real-world data. Few studies examine the role of mediator nodes, which are essential for modeling n-ary relationships, or investigate model performance variation across domains. This paper conducts a comprehensive evaluation of four representative KGE models on large-scale datasets FB-CVT-REV and FB+CVT-REV. Our analysis reveals critical insights, including substantial performance variations between small and large datasets, both in relative rankings and absolute metrics, systematic overestimation of model capabilities when n-ary relations are binarized, and fundamental limitations in current evaluation protocols and metrics.

Key facts. Cited by 2 papers in the map (data through 7 Oct 2026). Builds on 26 of its 47 references that are in the map. First posted on arXiv 11 Apr 2025.

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26 of 47 references.

References · 26

  1. 2020Open Graph Benchmark: Datasets for Machine Learning on Graphscited by 2,148
  2. 2014Embedding Entities and Relations for Learning and Inference in Knowledge Basescited by 929
  3. 2016Complex Embeddings for Simple Link Predictioncited by 897
  4. 2019RotatE: Knowledge Graph Embedding by Relational Rotation in Complex Spacecited by 893
  5. 2017Convolutional 2D Knowledge Graph Embeddingscited by 729
  6. 2020A Survey on Knowledge Graphs: Representation, Acquisition and Applicationscited by 643
  7. 2021OGB-LSC: A Large-Scale Challenge for Machine Learning on Graphscited by 328
  8. 2017A Comprehensive Survey of Graph Embedding: Problems, Techniques and Applicationscited by 260
  9. 2020A Survey on Knowledge Graph-Based Recommender Systemscited by 170
  10. 2019PyTorch-BigGraph: A Large-scale Graph Embedding Systemcited by 118
  11. 2020CoDEx: A Comprehensive Knowledge Graph Completion Benchmarkcited by 102
  12. 2020Bringing Light Into the Dark: A Large-scale Evaluation of Knowledge Graph Embedding Models Under a Unified Frameworkcited by 70
14 more
  1. 2020DGL-KE: Training Knowledge Graph Embeddings at Scalecited by 67
  2. 2016On the representation and embedding of knowledge bases beyond binary relationscited by 55
  3. 2020Realistic Re-evaluation of Knowledge Graph Completion Methods: An Experimental Studycited by 37
  4. 2021Marius: Learning Massive Graph Embeddings on a Single Machinecited by 29
  5. 2016ProjE: Embedding Projection for Knowledge Graph Completioncited by 26
  6. 2013Connecting Language and Knowledge Bases with Embedding Models for Relation Extractioncited by 21
  7. 2022Rethinking Knowledge Graph Evaluation Under the Open-World Assumptioncited by 17
  8. 2022A Unified Framework for Rank-based Evaluation Metrics for Link Prediction in Knowledge Graphscited by 14
  9. 2018On Evaluating Embedding Models for Knowledge Base Completioncited by 10
  10. 2023Sem@K: Is my knowledge graph embedding model semantic-aware?cited by 10
  11. 2022Re-thinking Knowledge Graph Completion Evaluation from an Information Retrieval Perspectivecited by 7
  12. 2023KGrEaT: A Framework to Evaluate Knowledge Graphs via Downstream Taskscited by 6
  13. 2023Do Similar Entities have Similar Embeddings?cited by 3
  14. 2024ReliK: A Reliability Measure for Knowledge Graph Embeddingscited by 3

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