FineBio: A Fine-Grained Video Dataset of Biological Experiments with Hierarchical Annotation
Not on the map. Why?
Abstract (arXiv)
In the development of science, accurate and reproducible documentation of the experimental process is crucial. Automatic recognition of the actions in experiments from videos would help experimenters by complementing the recording of experiments. Towards this goal, we propose FineBio, a new fine-grained video dataset of people performing biological experiments. The dataset consists of multi-view videos of 32 participants performing mock biological experiments with a total duration of 14.5 hours. One experiment forms a hierarchical structure, where a protocol consists of several steps, each further decomposed into a set of atomic operations. The uniqueness of biological experiments is that while they require strict adherence to steps described in each protocol, there is freedom in the order of atomic operations. We provide hierarchical annotation on protocols, steps, atomic operations, object locations, and their manipulation states, providing new challenges for structured activity understanding and hand-object interaction recognition. To find out challenges on activity understanding in biological experiments, we introduce baseline models and results on four different tasks, including (i) step segmentation, (ii) atomic operation detection (iii) object detection, and (iv) manipulated/affected object detection. Dataset and code are available from https://github.com/aistairc/FineBio.
Key facts. Cited by 11 papers in the map (data through 7 Oct 2026). Builds on 39 of its 70 references that are in the map. First posted on arXiv 1 Feb 2024.
Builds on
39 of 70 references.
References · 39
- 2014Adam: A Method for Stochastic Optimizationcited by 36,960
- 2014Microsoft COCO: Common Objects in Contextcited by 17,498
- 2015Faster R-CNN: Towards Real-Time Object Detection with Region Proposal Networkscited by 9,617
- 2020Deformable DETR: Deformable Transformers for End-to-End Object Detectioncited by 3,410
- 2017Quo Vadis, Action Recognition? A New Model and the Kinetics Datasetcited by 3,259
- 2020RAFT: Recurrent All-Pairs Field Transforms for Optical Flowcited by 2,385
- 2021Ego4D: Around the World in 3,000 Hours of Egocentric Videocited by 1,530
- 2019MMDetection: Open MMLab Detection Toolbox and Benchmarkcited by 1,379
- 2022DINO: DETR with Improved DeNoising Anchor Boxes for End-to-End Object Detectioncited by 1,306
- 2019HowTo100M: Learning a Text-Video Embedding by Watching Hundred Million Narrated Video Clipscited by 946
- 2018Scaling Egocentric Vision: The EPIC-KITCHENS Datasetcited by 789
- 2020Rescaling Egocentric Visioncited by 529
27 more
- 2019MS-TCN: Multi-Stage Temporal Convolutional Network for Action Segmentationcited by 370
- 2019COIN: A Large-scale Dataset for Comprehensive Instructional Video Analysiscited by 316
- 2022ActionFormer: Localizing Moments of Actions with Transformerscited by 308
- 2022Assembly101: A Large-Scale Multi-View Video Dataset for Understanding Procedural Activitiescited by 284
- 2020Understanding Human Hands in Contact at Internet Scalecited by 281
- 2020FineGym: A Hierarchical Video Dataset for Fine-grained Action Understandingcited by 232
- 2019Cross-task weakly supervised learning from instructional videoscited by 199
- 2021ASFormer: Transformer for Action Segmentationcited by 166
- 2022EPIC-KITCHENS VISOR Benchmark: VIdeo Segmentations and Object Relationscited by 139
- 2015Unsupervised Learning from Narrated Instruction Videoscited by 116
- 2022FineDiving: A Fine-grained Dataset for Procedure-aware Action Quality Assessmentcited by 106
- 2022My View is the Best View: Procedure Learning from Egocentric Videoscited by 81
- 2020The MECCANO Dataset: Understanding Human-Object Interactions from Egocentric Videos in an Industrial-like Domaincited by 79
- 2022Fine-Grained Egocentric Hand-Object Segmentation: Dataset, Model, and Applicationscited by 78
- 2018Diagnosing Error in Temporal Action Detectorscited by 71
- 2021A Petri Dish for Histopathology Image Analysiscited by 63
- 2015An end-to-end generative framework for video segmentation and recognitioncited by 61
- 2021Home Action Genome: Cooperative Compositional Action Understandingcited by 52
- 2023Action Scene Graphs for Long-Form Understanding of Egocentric Videoscited by 51
- 2021StereOBJ-1M: Large-scale Stereo Image Dataset for 6D Object Pose Estimationcited by 40
- 2020Detecting Hands and Recognizing Physical Contact in the Wildcited by 38
- 2022Learning Program Representations for Food Images and Cooking Recipescited by 16
- 2023Fine-grained Affordance Annotation for Egocentric Hand-Object Interaction Videoscited by 15
- 2017Trespassing the Boundaries: Labeling Temporal Bounds for Object Interactions in Egocentric Videocited by 14
- 2021Sequential Voting with Relational Box Fields for Active Object Detectioncited by 13
- 2021NucMM Dataset: 3D Neuronal Nuclei Instance Segmentation at Sub-Cubic Millimeter Scalecited by 12
- 2021Hand-Object Contact Prediction via Motion-Based Pseudo-Labeling and Guided Progressive Label Correctioncited by 2
Built on by
Citing papers per year: 2024: 5; 2025: 5; 2026: 1.
11 papers.
- 2024EgoExoLearn: A Dataset for Bridging Asynchronous Ego- and Exo-centric View of Procedural Activities in Real Worldcited by 93
- 2024Vinci: A Real-time Embodied Smart Assistant based on Egocentric Vision-Language Modelcited by 19
- 2025LabOS: The AI-XR Co-Scientist That Sees and Works With Humanscited by 7
- 2024Egocentric and Exocentric Methods: A Short Surveycited by 6
- 2025ProMQA-Assembly: Multimodal Procedural QA Dataset on Assemblycited by 5
- 2025ExpVid: A Benchmark for Experiment Video Understanding & Reasoningcited by 4
- 2024COM Kitchens: An Unedited Overhead-view Video Dataset as a Vision-Language Benchmarkcited by 3
- 2025HanDyVQA: A Video QA Benchmark for Fine-Grained Hand-Object Interaction Dynamicscited by 2
- 2024BioVL-QR: Egocentric Biochemical Vision-and-Language Dataset Using Micro QR Codescited by 1
- 2025TAMA: Tool-Augmented Multimodal Agent for Procedural Activity Understandingcited by 1
- 2026Improving and Evaluating Hand-Object Interaction Detectioncited by 1
- 2026Improving and Evaluating Hand-Object Interaction Detection16 Jun 2026
- 2025HanDyVQA: A Video QA Benchmark for Fine-Grained Hand-Object Interaction Dynamics30 Nov 2025
- 2025LabOS: The AI-XR Co-Scientist That Sees and Works With Humans16 Oct 2025
- 2025ExpVid: A Benchmark for Experiment Video Understanding & Reasoning13 Oct 2025
- 2025TAMA: Tool-Augmented Multimodal Agent for Procedural Activity Understanding30 Sep 2025
- 2025ProMQA-Assembly: Multimodal Procedural QA Dataset on Assembly3 Sep 2025
- 2024Vinci: A Real-time Embodied Smart Assistant based on Egocentric Vision-Language Model30 Dec 2024
- 2024Egocentric and Exocentric Methods: A Short Survey27 Oct 2024
- 2024COM Kitchens: An Unedited Overhead-view Video Dataset as a Vision-Language Benchmark5 Aug 2024
- 2024BioVL-QR: Egocentric Biochemical Vision-and-Language Dataset Using Micro QR Codes4 Apr 2024
- 2024EgoExoLearn: A Dataset for Bridging Asynchronous Ego- and Exo-centric View of Procedural Activities in Real World24 Mar 2024