Fast Uncertainty Estimates in Deep Learning Interatomic Potentials
Not on the map. Why?
Abstract (arXiv)
Deep learning has emerged as a promising paradigm to give access to highly accurate predictions of molecular and materials properties. A common short-coming shared by current approaches, however, is that neural networks only give point estimates of their predictions and do not come with predictive uncertainties associated with these estimates. Existing uncertainty quantification efforts have primarily leveraged the standard deviation of predictions across an ensemble of independently trained neural networks. This incurs a large computational overhead in both training and prediction that often results in order-of-magnitude more expensive predictions. Here, we propose a method to estimate the predictive uncertainty based on a single neural network without the need for an ensemble. This allows us to obtain uncertainty estimates with virtually no additional computational overhead over standard training and inference. We demonstrate that the quality of the uncertainty estimates matches those obtained from deep ensembles. We further examine the uncertainty estimates of our methods and deep ensembles across the configuration space of our test system and compare the uncertainties to the potential energy surface. Finally, we study the efficacy of the method in an active learning setting and find the results to match an ensemble-based strategy at order-of-magnitude reduced computational cost.
Key facts. Cited by 22 papers in the map (data through 7 Oct 2026). Builds on 17 of its 60 references that are in the map. First posted on arXiv 17 Nov 2022.
Builds on
17 of 60 references.
References · 17
- 2014Adam: A Method for Stochastic Optimizationcited by 36,960
- 2019PyTorch: An Imperative Style, High-Performance Deep Learning Librarycited by 20,160
- 2015Dropout as a Bayesian Approximation: Representing Model Uncertainty in Deep Learningcited by 4,416
- 2016Simple and Scalable Predictive Uncertainty Estimation using Deep Ensemblescited by 3,888
- 2019On the Convergence of Adam and Beyondcited by 834
- 2021E(3)-Equivariant Graph Neural Networks for Data-Efficient and Accurate Interatomic Potentialscited by 701
- 2017SchNet: A continuous-filter convolutional neural network for modeling quantum interactionscited by 569
- 2020Directional Message Passing for Molecular Graphscited by 556
- 2021GemNet: Universal Directional Graph Neural Networks for Moleculescited by 342
- 2019Cormorant: Covariant Molecular Neural Networkscited by 262
- 2022Learning Local Equivariant Representations for Large-Scale Atomistic Dynamicscited by 254
- 2017Deep Potential Molecular Dynamics: a scalable model with the accuracy of quantum mechanicscited by 213
5 more
- 2020Uncertainty Quantification Using Neural Networks for Molecular Property Predictioncited by 66
- 2018Active Learning of Uniformly Accurate Inter-atomic Potentials for Materials Simulationcited by 37
- 2021Informing Geometric Deep Learning with Electronic Interactions to Accelerate Quantum Chemistrycited by 27
- 2020Committee neural network potentials control generalization errors and enable active learningcited by 14
- 2019Fast Neural Network Approach for Direct Covariant Forces Prediction in Complex Multi-Element Extended Systemscited by 12
Built on by
Citing papers per year: 2022: 2; 2023: 7; 2024: 7; 2025: 3; 2026: 3.
22 papers.
Sort:
- 2023Matbench Discovery -- A framework to evaluate machine learning crystal stability predictionscited by 34
- 2023Scaling the leading accuracy of deep equivariant models to biomolecular simulations of realistic sizecited by 33
- 2023Single-model uncertainty quantification in neural network potentials does not consistently outperform model ensemblescited by 30
- 2023Uncertainty-biased molecular dynamics for learning uniformly accurate interatomic potentialscited by 16
- 2023Accurate machine learning force fields via experimental and simulation data fusioncited by 12
- 2022Transfer learning for chemically accurate interatomic neural network potentialscited by 11
- 2022Scalable Bayesian Uncertainty Quantification for Neural Network Potentials: Promise and Pitfallscited by 11
- 2024Model-free quantification of completeness, uncertainties, and outliers in atomistic machine learning using information theorycited by 10
- 2024Learning charges and long-range interactions from energies and forcescited by 7
- 2024Outlier-Detection for Reactive Machine Learned Potential Energy Surfacescited by 4
- 2024LTAU-FF: Loss Trajectory Analysis for Uncertainty in Atomistic Force Fieldscited by 3
- 2026Pretrained Model Representations as Acquisition Signals for Active Learning of MLIPscited by 3
10 more
- 2023Band-gap regression with architecture-optimized message-passing neural networkscited by 2
- 2024Enhanced sampling of robust molecular datasets with uncertainty-based collective variablescited by 2
- 2025LFaB: Low fidelity as Bias for Active Learning in the chemical configuration spacecited by 2
- 2024Accelerating the Training and Improving the Reliability of Machine-Learned Interatomic Potentials for Strongly Anharmonic Materials through Active Learningcited by 1
- 2024Evaluation of uncertainty estimations for Gaussian process regression based machine learning interatomic potentialscited by 1
- 2025Accelerating and enhancing thermodynamic simulations of electrochemical interfacescited by 1
- 2026A Systematic Survey and Benchmark of Deep Learning for Molecular Property Prediction in the Foundation Model Eracited by 1
- 2023Ensemble models outperform single model uncertainties and predictions for operator-learning of hypersonic flowscited by 0
- 2025Comparing the latent features of universal machine-learning interatomic potentialscited by 0
- 2026AdaptNTK: Adaptive Uncertainty Quantification and Active Learning for Neural Network Potentialscited by 0
- 2026AdaptNTK: Adaptive Uncertainty Quantification and Active Learning for Neural Network Potentials31 Aug 2026
- 2026Pretrained Model Representations as Acquisition Signals for Active Learning of MLIPs5 May 2026
- 2026A Systematic Survey and Benchmark of Deep Learning for Molecular Property Prediction in the Foundation Model Era17 Apr 2026
- 2025Comparing the latent features of universal machine-learning interatomic potentials5 Dec 2025
- 2025LFaB: Low fidelity as Bias for Active Learning in the chemical configuration space21 Aug 2025
- 2025Accelerating and enhancing thermodynamic simulations of electrochemical interfaces22 Mar 2025
- 2024Learning charges and long-range interactions from energies and forces19 Dec 2024
- 2024Evaluation of uncertainty estimations for Gaussian process regression based machine learning interatomic potentials27 Oct 2024
- 2024Accelerating the Training and Improving the Reliability of Machine-Learned Interatomic Potentials for Strongly Anharmonic Materials through Active Learning18 Sep 2024
- 2024Model-free quantification of completeness, uncertainties, and outliers in atomistic machine learning using information theory18 Apr 2024
- 2024Outlier-Detection for Reactive Machine Learned Potential Energy Surfaces27 Feb 2024
- 2024Enhanced sampling of robust molecular datasets with uncertainty-based collective variables6 Feb 2024
10 more
- 2024LTAU-FF: Loss Trajectory Analysis for Uncertainty in Atomistic Force Fields1 Feb 2024
- 2023Uncertainty-biased molecular dynamics for learning uniformly accurate interatomic potentials3 Dec 2023
- 2023Ensemble models outperform single model uncertainties and predictions for operator-learning of hypersonic flows31 Oct 2023
- 2023Band-gap regression with architecture-optimized message-passing neural networks12 Sep 2023
- 2023Matbench Discovery -- A framework to evaluate machine learning crystal stability predictions28 Aug 2023
- 2023Accurate machine learning force fields via experimental and simulation data fusion17 Aug 2023
- 2023Single-model uncertainty quantification in neural network potentials does not consistently outperform model ensembles2 May 2023
- 2023Scaling the leading accuracy of deep equivariant models to biomolecular simulations of realistic size20 Apr 2023
- 2022Scalable Bayesian Uncertainty Quantification for Neural Network Potentials: Promise and Pitfalls15 Dec 2022
- 2022Transfer learning for chemically accurate interatomic neural network potentials7 Dec 2022
- 2023Matbench Discovery -- A framework to evaluate machine learning crystal stability predictionscited by 34
- 2023Scaling the leading accuracy of deep equivariant models to biomolecular simulations of realistic sizecited by 33
- 2023Single-model uncertainty quantification in neural network potentials does not consistently outperform model ensemblescited by 30
- 2023Uncertainty-biased molecular dynamics for learning uniformly accurate interatomic potentialscited by 16
- 2023Accurate machine learning force fields via experimental and simulation data fusioncited by 12
- 2022Transfer learning for chemically accurate interatomic neural network potentialscited by 11
- 2022Scalable Bayesian Uncertainty Quantification for Neural Network Potentials: Promise and Pitfallscited by 11
- 2024Model-free quantification of completeness, uncertainties, and outliers in atomistic machine learning using information theorycited by 10
- 2024Learning charges and long-range interactions from energies and forcescited by 7
- 2024Outlier-Detection for Reactive Machine Learned Potential Energy Surfacescited by 4
- 2024LTAU-FF: Loss Trajectory Analysis for Uncertainty in Atomistic Force Fieldscited by 3
- 2026Pretrained Model Representations as Acquisition Signals for Active Learning of MLIPscited by 3
12 most cited of 22 All 22 (JSON)
- 2026AdaptNTK: Adaptive Uncertainty Quantification and Active Learning for Neural Network Potentials31 Aug 2026
- 2026Pretrained Model Representations as Acquisition Signals for Active Learning of MLIPs5 May 2026
- 2026A Systematic Survey and Benchmark of Deep Learning for Molecular Property Prediction in the Foundation Model Era17 Apr 2026
- 2025Comparing the latent features of universal machine-learning interatomic potentials5 Dec 2025
- 2025LFaB: Low fidelity as Bias for Active Learning in the chemical configuration space21 Aug 2025
- 2025Accelerating and enhancing thermodynamic simulations of electrochemical interfaces22 Mar 2025
- 2024Learning charges and long-range interactions from energies and forces19 Dec 2024
- 2024Evaluation of uncertainty estimations for Gaussian process regression based machine learning interatomic potentials27 Oct 2024
- 2024Accelerating the Training and Improving the Reliability of Machine-Learned Interatomic Potentials for Strongly Anharmonic Materials through Active Learning18 Sep 2024
- 2024Model-free quantification of completeness, uncertainties, and outliers in atomistic machine learning using information theory18 Apr 2024
- 2024Outlier-Detection for Reactive Machine Learned Potential Energy Surfaces27 Feb 2024
- 2024Enhanced sampling of robust molecular datasets with uncertainty-based collective variables6 Feb 2024
12 newest of 22 All 22 (JSON)