Uncertainty-biased molecular dynamics for learning uniformly accurate interatomic potentials
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Abstract (arXiv)
Efficiently creating a concise but comprehensive data set for training machine-learned interatomic potentials (MLIPs) is an under-explored problem. Active learning, which uses biased or unbiased molecular dynamics (MD) to generate candidate pools, aims to address this objective. Existing biased and unbiased MD-simulation methods, however, are prone to miss either rare events or extrapolative regions -- areas of the configurational space where unreliable predictions are made. This work demonstrates that MD, when biased by the MLIP's energy uncertainty, simultaneously captures extrapolative regions and rare events, which is crucial for developing uniformly accurate MLIPs. Furthermore, exploiting automatic differentiation, we enhance bias-forces-driven MD with the concept of bias stress. We employ calibrated gradient-based uncertainties to yield MLIPs with similar or, sometimes, better accuracy than ensemble-based methods at a lower computational cost. Finally, we apply uncertainty-biased MD to alanine dipeptide and MIL-53(Al), generating MLIPs that represent both configurational spaces more accurately than models trained with conventional MD.
Key facts. Cited by 16 papers in the map (data through 7 Oct 2026). Builds on 32 of its 95 references that are in the map. First posted on arXiv 3 Dec 2023.
Builds on
32 of 95 references.
References · 32
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Citing papers per year: 2024: 5; 2025: 5; 2026: 6.
16 papers.
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- 2024Orb: A Fast, Scalable Neural Network Potentialcited by 63
- 2024Active Learning for Neural PDE Solverscited by 22
- 2025BLIPs: Bayesian Learned Interatomic Potentialscited by 6
- 2026Pretrained Model Representations as Acquisition Signals for Active Learning of MLIPscited by 3
- 2024Enhanced sampling of robust molecular datasets with uncertainty-based collective variablescited by 2
- 2025Learning atomic forces from uncertainty-calibrated adversarial attackscited by 2
- 2026Force-Aware Neural Tangent Kernels for Scalable and Robust Active Learning of MLIPscited by 2
- 2024Physics-Informed Weakly Supervised Learning for Interatomic Potentialscited by 1
- 2024Accelerating the Training and Improving the Reliability of Machine-Learned Interatomic Potentials for Strongly Anharmonic Materials through Active Learningcited by 1
- 2025Gradient-based grand canonical optimization enabled by graph neural networks with fractional atomic existencecited by 1
- 2026Knowing when to trust machine-learned interatomic potentialscited by 1
- 2025A Scalable and Quantum-Accurate Foundation Model for Biomolecular Force Field via Linearly Tensorized Quadrangle Attentioncited by 0
4 more
- 2025Performance of universal machine-learned potentials with explicit long-range interactions in biomolecular simulationscited by 0
- 2026Coarse-Grained Boltzmann Generatorscited by 0
- 2026Stein Kernelized Molecular Dynamics for Active Learning of Interatomic Potentialscited by 0
- 2026Multivariate conformal uncertainty propagation in multitask atomistic simulation: Successes and pitfallscited by 0
- 2026Multivariate conformal uncertainty propagation in multitask atomistic simulation: Successes and pitfalls25 Sep 2026
- 2026Stein Kernelized Molecular Dynamics for Active Learning of Interatomic Potentials2 Jun 2026
- 2026Force-Aware Neural Tangent Kernels for Scalable and Robust Active Learning of MLIPs13 May 2026
- 2026Pretrained Model Representations as Acquisition Signals for Active Learning of MLIPs5 May 2026
- 2026Knowing when to trust machine-learned interatomic potentials1 May 2026
- 2026Coarse-Grained Boltzmann Generators11 Feb 2026
- 2025BLIPs: Bayesian Learned Interatomic Potentials19 Aug 2025
- 2025Performance of universal machine-learned potentials with explicit long-range interactions in biomolecular simulations14 Aug 2025
- 2025Gradient-based grand canonical optimization enabled by graph neural networks with fractional atomic existence25 Jul 2025
- 2025A Scalable and Quantum-Accurate Foundation Model for Biomolecular Force Field via Linearly Tensorized Quadrangle Attention1 Jul 2025
- 2025Learning atomic forces from uncertainty-calibrated adversarial attacks25 Feb 2025
- 2024Orb: A Fast, Scalable Neural Network Potential29 Oct 2024
4 more
- 2024Accelerating the Training and Improving the Reliability of Machine-Learned Interatomic Potentials for Strongly Anharmonic Materials through Active Learning18 Sep 2024
- 2024Active Learning for Neural PDE Solvers2 Aug 2024
- 2024Physics-Informed Weakly Supervised Learning for Interatomic Potentials23 Jul 2024
- 2024Enhanced sampling of robust molecular datasets with uncertainty-based collective variables6 Feb 2024
- 2024Orb: A Fast, Scalable Neural Network Potentialcited by 63
- 2024Active Learning for Neural PDE Solverscited by 22
- 2025BLIPs: Bayesian Learned Interatomic Potentialscited by 6
- 2026Pretrained Model Representations as Acquisition Signals for Active Learning of MLIPscited by 3
- 2024Enhanced sampling of robust molecular datasets with uncertainty-based collective variablescited by 2
- 2025Learning atomic forces from uncertainty-calibrated adversarial attackscited by 2
- 2026Force-Aware Neural Tangent Kernels for Scalable and Robust Active Learning of MLIPscited by 2
- 2024Physics-Informed Weakly Supervised Learning for Interatomic Potentialscited by 1
- 2024Accelerating the Training and Improving the Reliability of Machine-Learned Interatomic Potentials for Strongly Anharmonic Materials through Active Learningcited by 1
- 2025Gradient-based grand canonical optimization enabled by graph neural networks with fractional atomic existencecited by 1
- 2026Knowing when to trust machine-learned interatomic potentialscited by 1
- 2025A Scalable and Quantum-Accurate Foundation Model for Biomolecular Force Field via Linearly Tensorized Quadrangle Attentioncited by 0
12 most cited of 16 All 16 (JSON)
- 2026Multivariate conformal uncertainty propagation in multitask atomistic simulation: Successes and pitfalls25 Sep 2026
- 2026Stein Kernelized Molecular Dynamics for Active Learning of Interatomic Potentials2 Jun 2026
- 2026Force-Aware Neural Tangent Kernels for Scalable and Robust Active Learning of MLIPs13 May 2026
- 2026Pretrained Model Representations as Acquisition Signals for Active Learning of MLIPs5 May 2026
- 2026Knowing when to trust machine-learned interatomic potentials1 May 2026
- 2026Coarse-Grained Boltzmann Generators11 Feb 2026
- 2025BLIPs: Bayesian Learned Interatomic Potentials19 Aug 2025
- 2025Performance of universal machine-learned potentials with explicit long-range interactions in biomolecular simulations14 Aug 2025
- 2025Gradient-based grand canonical optimization enabled by graph neural networks with fractional atomic existence25 Jul 2025
- 2025A Scalable and Quantum-Accurate Foundation Model for Biomolecular Force Field via Linearly Tensorized Quadrangle Attention1 Jul 2025
- 2025Learning atomic forces from uncertainty-calibrated adversarial attacks25 Feb 2025
- 2024Orb: A Fast, Scalable Neural Network Potential29 Oct 2024
12 newest of 16 All 16 (JSON)