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Ensemble-SINDy: Robust sparse model discovery in the low-data, high-noise limit, with active learning and control

arXiv 2111.10992 ↗First posted 22 Nov 2021math.NA cs.NA math.DScited by 134

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Abstract (arXiv)

Sparse model identification enables the discovery of nonlinear dynamical systems purely from data; however, this approach is sensitive to noise, especially in the low-data limit. In this work, we leverage the statistical approach of bootstrap aggregating (bagging) to robustify the sparse identification of nonlinear dynamics (SINDy) algorithm. First, an ensemble of SINDy models is identified from subsets of limited and noisy data. The aggregate model statistics are then used to produce inclusion probabilities of the candidate functions, which enables uncertainty quantification and probabilistic forecasts. We apply this ensemble-SINDy (E-SINDy) algorithm to several synthetic and real-world data sets and demonstrate substantial improvements to the accuracy and robustness of model discovery from extremely noisy and limited data. For example, E-SINDy uncovers partial differential equations models from data with more than twice as much measurement noise as has been previously reported. Similarly, E-SINDy learns the Lotka Volterra dynamics from remarkably limited data of yearly lynx and hare pelts collected from 1900-1920. E-SINDy is computationally efficient, with similar scaling as standard SINDy. Finally, we show that ensemble statistics from E-SINDy can be exploited for active learning and improved model predictive control.

Key facts. Cited by 134 papers in the map (data through 7 Oct 2026). First posted on arXiv 22 Nov 2021.

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Citing papers per year: 2022: 13; 2023: 25; 2024: 28; 2025: 36; 2026: 32.

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  1. 2023Machine learning with data assimilation and uncertainty quantification for dynamical systems: a reviewcited by 74
  2. 2022Discovering Governing Equations from Partial Measurements with Deep Delay Autoencoderscited by 58
  3. 2024KAN-ODEs: Kolmogorov-Arnold Network Ordinary Differential Equations for Learning Dynamical Systems and Hidden Physicscited by 58
  4. 2022Learning Sparse Nonlinear Dynamics via Mixed-Integer Optimizationcited by 29
  5. 2023Koopman neural operator as a mesh-free solver of non-linear partial differential equationscited by 29
  6. 2023Latent Space Symmetry Discoverycited by 29
  7. 2022Bayesian autoencoders for data-driven discovery of coordinates, governing equations and fundamental constantscited by 24
  8. 2024SINDy-RL: Interpretable and Efficient Model-Based Reinforcement Learningcited by 24
  9. 2023Direct Estimation of Parameters in ODE Models Using WENDy: Weak-form Estimation of Nonlinear Dynamicscited by 20
  10. 2023Machine Learning for Partial Differential Equationscited by 20
  11. 2023Benchmarking sparse system identification with low-dimensional chaoscited by 19
  12. 2025Sparse identification of nonlinear dynamics and Koopman operators with Shallow Recurrent Decoder Networkscited by 19
38 more
  1. 2022Discrepancy Modeling Framework: Learning missing physics, modeling systematic residuals, and disambiguating between deterministic and random effectscited by 15
  2. 2023Convergence of uncertainty estimates in Ensemble and Bayesian sparse model discoverycited by 15
  3. 2024Rapid Bayesian identification of sparse nonlinear dynamics from scarce and noisy datacited by 15
  4. 2022Noise-aware Physics-informed Machine Learning for Robust PDE Discoverycited by 14
  5. 2022Asymptotic consistency of the WSINDy algorithm in the limit of continuum datacited by 14
  6. 2024LLM4ED: Large Language Models for Automatic Equation Discoverycited by 13
  7. 2025Machine learning for modelling unstructured grid data in computational physics: a reviewcited by 12
  8. 2025Generative Discovery of Partial Differential Equations by Learning from Math Handbookscited by 12
  9. 2022Learning Anisotropic Interaction Rules from Individual Trajectories in a Heterogeneous Cellular Populationcited by 11
  10. 2023Coarse-Graining Hamiltonian Systems Using WSINDycited by 11
  11. 2024The Weak Form Is Stronger Than You Thinkcited by 11
  12. 2025Evolutionary Optimization of Physics-Informed Neural Networks: Evo-PINN Frontiers and Opportunitiescited by 10
  13. 2024Dynamical System Identification, Model Selection and Model Uncertainty Quantification by Bayesian Inferencecited by 9
  14. 2023Physics-constrained robust learning of open-form partial differential equations from limited and noisy datacited by 8
  15. 2024Shallow Recurrent Decoder for Reduced Order Modeling of Plasma Dynamicscited by 8
  16. 2022A Kernel Approach for PDE Discovery and Operator Learningcited by 7
  17. 2023OKRidge: Scalable Optimal k-Sparse Ridge Regressioncited by 7
  18. 2023CEBoosting: Online Sparse Identification of Dynamical Systems with Regime Switching by Causation Entropy Boostingcited by 7
  19. 2023HyperSINDy: Deep Generative Modeling of Nonlinear Stochastic Governing Equationscited by 7
  20. 2024Parametric PDE Control with Deep Reinforcement Learning and Differentiable L0-Sparse Polynomial Policiescited by 7
  21. 2024Weak-Form Inference for Hybrid Dynamical Systems in Ecologycited by 7
  22. 2022Deep Kernel Learning of Dynamical Models from High-Dimensional Noisy Datacited by 6
  23. 2023A Robust SINDy Approach by Combining Neural Networks and an Integral Formcited by 6
  24. 2024BINDy -- Bayesian identification of nonlinear dynamics with reversible-jump Markov-chain Monte-Carlocited by 6
  25. 2025SyMANTIC: An Efficient Symbolic Regression Method for Interpretable and Parsimonious Model Discovery in Science and Beyondcited by 6
  26. 2025Data-Efficient Kernel Methods for Learning Differential Equations and Their Solution Operators: Algorithms and Error Analysiscited by 6
  27. 2025Data assimilation and discrepancy modeling with shallow recurrent decoderscited by 6
  28. 2022Robust Modeling of Unknown Dynamical Systems via Ensemble Averaged Learningcited by 5
  29. 2023Gaussian process learning of nonlinear dynamicscited by 5
  30. 2024Data-driven local operator finding for reduced-order modelling of plasma systems: I. Concept and verificationscited by 5
  31. 2024Data-driven local operator finding for reduced-order modelling of plasma systems: II. Application to parametric dynamicscited by 5
  32. 2024Statistical Mechanics of Dynamical System Identificationcited by 5
  33. 2025Physics-informed Temporal Alignment for Auto-regressive PDE Foundation Modelscited by 5
  34. 2025The Seismic Wavefield Common Task Frameworkcited by 5
  35. 2026LLM-ACES: Closed-Loop Discovery of Dynamical Systems with LLM-Guided Adaptive Searchcited by 5
  36. 2023SDYN-GANs: Adversarial Learning Methods for Multistep Generative Models for General Order Stochastic Dynamicscited by 4
  37. 2023Symbolic Regression on Sparse and Noisy Data with Gaussian Processescited by 4
  38. 2024Machine Learning Applications to Computational Plasma Physics and Reduced-Order Plasma Modeling: A Perspectivecited by 4

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