mlsanityData to 7 Oct 2026

Convergence of uncertainty estimates in Ensemble and Bayesian sparse model discovery

arXiv 2301.12649 ↗First posted 30 Jan 2023cs.LG math.DS stat.MEcited by 15

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Abstract (arXiv)

Sparse model identification enables nonlinear dynamical system discovery from data. However, the control of false discoveries for sparse model identification is challenging, especially in the low-data and high-noise limit. In this paper, we perform a theoretical study on ensemble sparse model discovery, which shows empirical success in terms of accuracy and robustness to noise. In particular, we analyse the bootstrapping-based sequential thresholding least-squares estimator. We show that this bootstrapping-based ensembling technique can perform a provably correct variable selection procedure with an exponential convergence rate of the error rate. In addition, we show that the ensemble sparse model discovery method can perform computationally efficient uncertainty estimation, compared to expensive Bayesian uncertainty quantification methods via MCMC. We demonstrate the convergence properties and connection to uncertainty quantification in various numerical studies on synthetic sparse linear regression and sparse model discovery. The experiments on sparse linear regression support that the bootstrapping-based sequential thresholding least-squares method has better performance for sparse variable selection compared to LASSO, thresholding least-squares, and bootstrapping-based LASSO. In the sparse model discovery experiment, we show that the bootstrapping-based sequential thresholding least-squares method can provide valid uncertainty quantification, converging to a delta measure centered around the true value with increased sample sizes. Finally, we highlight the improved robustness to hyperparameter selection under shifting noise and sparsity levels of the bootstrapping-based sequential thresholding least-squares method compared to other sparse regression methods.

Key facts. Cited by 15 papers in the map (data through 7 Oct 2026). Builds on 17 of its 95 references that are in the map. First posted on arXiv 30 Jan 2023.

Builds on

17 of 95 references.

References · 17

  1. 2017Sparse identification of nonlinear dynamics for model predictive control in the low-data limitcited by 139
  2. 2021Ensemble-SINDy: Robust sparse model discovery in the low-data, high-noise limit, with active learning and controlcited by 134
  3. 2020SINDy-PI: A Robust Algorithm for Parallel Implicit Sparse Identification of Nonlinear Dynamicscited by 125
  4. 2014Controlling the false discovery rate via knockoffscited by 97
  5. 2021PySINDy: A comprehensive Python package for robust sparse system identificationcited by 88
  6. 2017Sparse learning of stochastic dynamic equationscited by 76
  7. 2022Discovering Governing Equations from Partial Measurements with Deep Delay Autoencoderscited by 58
  8. 2018On the Convergence of the SINDy Algorithmcited by 49
  9. 2015Robust Regression via Hard Thresholdingcited by 39
  10. 2018A Unified Framework for Sparse Relaxed Regularized Regression: SR3cited by 36
  11. 2015False Discoveries Occur Early on the Lasso Pathcited by 31
  12. 2022Bayesian autoencoders for data-driven discovery of coordinates, governing equations and fundamental constantscited by 24
5 more
  1. 2018On the Non-asymptotic and Sharp Lower Tail Bounds of Random Variablescited by 19
  2. 2020Bayesian Bootstrap Spike-and-Slab LASSOcited by 8
  3. 2016Can we trust the bootstrap in high-dimension?cited by 4
  4. 2021Bayesian data-driven discovery of partial differential equations with variable coefficientscited by 4
  5. 2022Loss-guided Stability Selectioncited by 3

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Cited by year (2026 to 7 Oct)

Citing papers per year: 2023: 4; 2024: 2; 2025: 8; 2026: 1.

15 papers.

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  1. 2023Benchmarking sparse system identification with low-dimensional chaoscited by 19
  2. 2025Sparse identification of nonlinear dynamics and Koopman operators with Shallow Recurrent Decoder Networkscited by 19
  3. 2024Rapid Bayesian identification of sparse nonlinear dynamics from scarce and noisy datacited by 15
  4. 2023HyperSINDy: Deep Generative Modeling of Nonlinear Stochastic Governing Equationscited by 7
  5. 2024Statistical Mechanics of Dynamical System Identificationcited by 5
  6. 2025T-SHRED: Symbolic Regression for Regularization and Model Discovery with Transformer Shallow Recurrent Decoderscited by 4
  7. 2025Mesh-free sparse identification of nonlinear dynamicscited by 3
  8. 2025Sparse Identification of Nonlinear Dynamics with Conformal Predictioncited by 3
  9. 2025PySHRED: A Python package for SHallow REcurrent Decoding for sparse sensing, model reduction and scientific discoverycited by 2
  10. 2025Overcoming error-in-variable problem in data-driven model discovery by orthogonal distance regressioncited by 1
  11. 2023Comparison of Single- and Multi- Objective Optimization Quality for Evolutionary Equation Discoverycited by 0
  12. 2023Exact identification of nonlinear dynamical systems by Trimmed Lassocited by 0
3 more
  1. 2025A joint optimization approach to identifying sparse dynamics using least squares kernel collocationcited by 0
  2. 2025From STLS to Projection-based Dictionary Selection in Sparse Regression for System Identificationcited by 0
  3. 2026PSI-SINDy: Post-Selection Inference for Sparse Identification of Nonlinear Dynamicscited by 0