Rapid Bayesian identification of sparse nonlinear dynamics from scarce and noisy data
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Abstract (arXiv)
We propose a fast probabilistic framework for identifying differential equations governing the dynamics of observed data. We recast the SINDy method within a Bayesian framework and use Gaussian approximations for the prior and likelihood to speed up computation. The resulting method, Bayesian-SINDy, not only quantifies uncertainty in the parameters estimated but also is more robust when learning the correct model from limited and noisy data. Using both synthetic and real-life examples such as Lynx-Hare population dynamics, we demonstrate the effectiveness of the new framework in learning correct model equations and compare its computational and data efficiency with existing methods. Because Bayesian-SINDy can quickly assimilate data and is robust against noise, it is particularly suitable for biological data and real-time system identification in control. Its probabilistic framework also enables the calculation of information entropy, laying the foundation for an active learning strategy.
Key facts. Cited by 15 papers in the map (data through 14 Oct 2026). Builds on 11 of its 46 references that are in the map. First posted on arXiv 23 Feb 2024.
Builds on
11 of 46 references.
References · 11
- 2020Weak SINDy For Partial Differential Equationscited by 155
- 2021Ensemble-SINDy: Robust sparse model discovery in the low-data, high-noise limit, with active learning and controlcited by 137
- 2020SINDy-PI: A Robust Algorithm for Parallel Implicit Sparse Identification of Nonlinear Dynamicscited by 125
- 2018On the Convergence of the SINDy Algorithmcited by 49
- 2020Automatic Differentiation to Simultaneously Identify Nonlinear Dynamics and Extract Noise Probability Distributions from Datacited by 37
- 2018A Unified Framework for Sparse Relaxed Regularized Regression: SR3cited by 36
- 2020On spike-and-slab priors for Bayesian equation discovery of nonlinear dynamical systems via sparse linear regressioncited by 24
- 2023Benchmarking sparse system identification with low-dimensional chaoscited by 19
- 2021SINDy with Control: A Tutorialcited by 15
- 2023Convergence of uncertainty estimates in Ensemble and Bayesian sparse model discoverycited by 15
- 2024Dynamical System Identification, Model Selection and Model Uncertainty Quantification by Bayesian Inferencecited by 9
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Citing papers per year: 2024: 3; 2025: 6; 2026: 6.
15 papers.
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- 2024BINDy -- Bayesian identification of nonlinear dynamics with reversible-jump Markov-chain Monte-Carlocited by 6
- 2024Statistical Mechanics of Dynamical System Identificationcited by 5
- 2025Sparse Identification of Nonlinear Dynamics with Conformal Predictioncited by 3
- 2025Data-driven Discovery of Digital Twins in Biomedical Researchcited by 2
- 2026Physics-Informed Neural Networks for Biological 2D+t Reaction-Diffusion Systemscited by 2
- 2026Fourier Weak SINDy: Spectral Test Function Selection for Robust Model Identificationcited by 1
- 2024Machine learning for cerebral blood vessels' malformationscited by 0
- 2025BLADE: Bayesian Langevin Active Discovery with Replica Exchange for Identification of Complex Systemscited by 0
- 2025VeMo: A Lightweight Data-Driven Approach to Model Vehicle Dynamicscited by 0
- 2025A joint optimization approach to identifying sparse dynamics using least squares kernel collocationcited by 0
- 2025From STLS to Projection-based Dictionary Selection in Sparse Regression for System Identificationcited by 0
- 2026Open datasets and machine learning for two-phase heat transfer: a review following a spatial-temporal taxonomycited by 0
3 more
- 2026How Low Can You Go? Active Learning for Sparse Model Discovery in the Ultra-Low-Data Limitcited by 0
- 2026An Introduction to Sparse Identification of Nonlinear Dynamics for Engineering Applicationscited by 0
- 2026Verifier-Guided Model Discovery for Physical Dynamical Systems with Pretrained Symbolic Transformerscited by 0
- 2026Verifier-Guided Model Discovery for Physical Dynamical Systems with Pretrained Symbolic Transformers1 Aug 2026
- 2026An Introduction to Sparse Identification of Nonlinear Dynamics for Engineering Applications16 Jul 2026
- 2026How Low Can You Go? Active Learning for Sparse Model Discovery in the Ultra-Low-Data Limit10 Jun 2026
- 2026Open datasets and machine learning for two-phase heat transfer: a review following a spatial-temporal taxonomy21 May 2026
- 2026Fourier Weak SINDy: Spectral Test Function Selection for Robust Model Identification22 Apr 2026
- 2026Physics-Informed Neural Networks for Biological 2D+t Reaction-Diffusion Systems20 Apr 2026
- 2025From STLS to Projection-based Dictionary Selection in Sparse Regression for System Identification16 Dec 2025
- 2025A joint optimization approach to identifying sparse dynamics using least squares kernel collocation23 Nov 2025
- 2025VeMo: A Lightweight Data-Driven Approach to Model Vehicle Dynamics8 Oct 2025
- 2025Data-driven Discovery of Digital Twins in Biomedical Research29 Aug 2025
- 2025Sparse Identification of Nonlinear Dynamics with Conformal Prediction15 Jul 2025
- 2025BLADE: Bayesian Langevin Active Discovery with Replica Exchange for Identification of Complex Systems4 Mar 2025
- 2024BINDy -- Bayesian identification of nonlinear dynamics with reversible-jump Markov-chain Monte-Carlocited by 6
- 2024Statistical Mechanics of Dynamical System Identificationcited by 5
- 2025Sparse Identification of Nonlinear Dynamics with Conformal Predictioncited by 3
- 2025Data-driven Discovery of Digital Twins in Biomedical Researchcited by 2
- 2026Physics-Informed Neural Networks for Biological 2D+t Reaction-Diffusion Systemscited by 2
- 2026Fourier Weak SINDy: Spectral Test Function Selection for Robust Model Identificationcited by 1
- 2024Machine learning for cerebral blood vessels' malformationscited by 0
- 2025BLADE: Bayesian Langevin Active Discovery with Replica Exchange for Identification of Complex Systemscited by 0
- 2025VeMo: A Lightweight Data-Driven Approach to Model Vehicle Dynamicscited by 0
- 2025A joint optimization approach to identifying sparse dynamics using least squares kernel collocationcited by 0
- 2025From STLS to Projection-based Dictionary Selection in Sparse Regression for System Identificationcited by 0
- 2026Open datasets and machine learning for two-phase heat transfer: a review following a spatial-temporal taxonomycited by 0
12 most cited of 15 All 15 (JSON)
- 2026Verifier-Guided Model Discovery for Physical Dynamical Systems with Pretrained Symbolic Transformers1 Aug 2026
- 2026An Introduction to Sparse Identification of Nonlinear Dynamics for Engineering Applications16 Jul 2026
- 2026How Low Can You Go? Active Learning for Sparse Model Discovery in the Ultra-Low-Data Limit10 Jun 2026
- 2026Open datasets and machine learning for two-phase heat transfer: a review following a spatial-temporal taxonomy21 May 2026
- 2026Fourier Weak SINDy: Spectral Test Function Selection for Robust Model Identification22 Apr 2026
- 2026Physics-Informed Neural Networks for Biological 2D+t Reaction-Diffusion Systems20 Apr 2026
- 2025From STLS to Projection-based Dictionary Selection in Sparse Regression for System Identification16 Dec 2025
- 2025A joint optimization approach to identifying sparse dynamics using least squares kernel collocation23 Nov 2025
- 2025VeMo: A Lightweight Data-Driven Approach to Model Vehicle Dynamics8 Oct 2025
- 2025Data-driven Discovery of Digital Twins in Biomedical Research29 Aug 2025
- 2025Sparse Identification of Nonlinear Dynamics with Conformal Prediction15 Jul 2025
- 2025BLADE: Bayesian Langevin Active Discovery with Replica Exchange for Identification of Complex Systems4 Mar 2025
12 newest of 15 All 15 (JSON)