Topology-Imbalance Learning for Semi-Supervised Node Classification
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Abstract (arXiv)
The class imbalance problem, as an important issue in learning node representations, has drawn increasing attention from the community. Although the imbalance considered by existing studies roots from the unequal quantity of labeled examples in different classes (quantity imbalance), we argue that graph data expose a unique source of imbalance from the asymmetric topological properties of the labeled nodes, i.e., labeled nodes are not equal in terms of their structural role in the graph (topology imbalance). In this work, we first probe the previously unknown topology-imbalance issue, including its characteristics, causes, and threats to semi-supervised node classification learning. We then provide a unified view to jointly analyzing the quantity- and topology- imbalance issues by considering the node influence shift phenomenon with the Label Propagation algorithm. In light of our analysis, we devise an influence conflict detection -- based metric Totoro to measure the degree of graph topology imbalance and propose a model-agnostic method ReNode to address the topology-imbalance issue by re-weighting the influence of labeled nodes adaptively based on their relative positions to class boundaries. Systematic experiments demonstrate the effectiveness and generalizability of our method in relieving topology-imbalance issue and promoting semi-supervised node classification. The further analysis unveils varied sensitivity of different graph neural networks (GNNs) to topology imbalance, which may serve as a new perspective in evaluating GNN architectures.
Key facts. Cited by 56 papers in the map (data through 7 Oct 2026). Builds on 34 of its 81 references that are in the map. First posted on arXiv 8 Oct 2021.
Builds on
34 of 81 references.
References · 34
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- 2018Pitfalls of Graph Neural Network Evaluationcited by 994
- 2018Predict then Propagate: Graph Neural Networks meet Personalized PageRankcited by 987
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Citing papers per year: 2022: 7; 2023: 19; 2024: 12; 2025: 12; 2026: 6.
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- 2024A Survey of Graph Neural Networks in Real world: Imbalance, Noise, Privacy and OOD Challengescited by 54
- 2022TAM: Topology-Aware Margin Loss for Class-Imbalanced Node Classificationcited by 41
- 2022Position-aware Structure Learning for Graph Topology-imbalance by Relieving Under-reaching and Over-squashingcited by 31
- 2023Class-Imbalanced Graph Learning without Class Rebalancingcited by 29
- 2023Semi-supervised Domain Adaptation in Graph Transfer Learningcited by 27
- 2023Class-Imbalanced Learning on Graphs: A Surveycited by 24
- 2023Hyperbolic Geometric Graph Representation Learning for Hierarchy-imbalance Node Classificationcited by 23
- 2022FreeKD: Free-direction Knowledge Distillation for Graph Neural Networkscited by 22
- 2023GraphSHA: Synthesizing Harder Samples for Class-Imbalanced Node Classificationcited by 17
- 2023Joint Edge-Model Sparse Learning is Provably Efficient for Graph Neural Networkscited by 16
- 2023A Survey of Imbalanced Learning on Graphs: Problems, Techniques, and Future Directionscited by 15
- 2023Towards Data-centric Graph Machine Learning: Review and Outlookcited by 15
38 more
- 2023Rethinking Semi-Supervised Imbalanced Node Classification from Bias-Variance Decompositioncited by 13
- 2022TopoImb: Toward Topology-level Imbalance in Learning from Graphscited by 12
- 2023NodeMixup: Tackling Under-Reaching for Graph Neural Networkscited by 12
- 2023Leveraging Label Non-Uniformity for Node Classification in Graph Neural Networkscited by 11
- 2023BeMap: Balanced Message Passing for Fair Graph Neural Networkcited by 11
- 2024Rethinking Fair Graph Neural Networks from Re-balancingcited by 11
- 2025A Comprehensive Survey on Imbalanced Data Learningcited by 10
- 2023Semantic-aware Node Synthesis for Imbalanced Heterogeneous Information Networkscited by 9
- 2024LOGIN: A Large Language Model Consulted Graph Neural Network Training Frameworkcited by 8
- 2023Over-Sampling Strategy in Feature Space for Graphs based Class-imbalanced Bot Detectioncited by 7
- 2023Imbalanced Node Classification Beyond Homophilic Assumptioncited by 7
- 2024DIVE: Subgraph Disagreement for Graph Out-of-Distribution Generalizationcited by 7
- 2022Synthetic Over-sampling for Imbalanced Node Classification with Graph Neural Networkscited by 6
- 2024Mitigating Label Noise on Graph via Topological Sample Selectioncited by 6
- 2024Leveraging Invariant Principle for Heterophilic Graph Structure Distribution Shiftscited by 6
- 2022Omni-Granular Ego-Semantic Propagation for Self-Supervised Graph Representation Learningcited by 5
- 2024Disambiguated Node Classification with Graph Neural Networkscited by 4
- 2024Edge Classification on Graphs: New Directions in Topological Imbalancecited by 4
- 2025IceBerg: Debiased Self-Training for Class-Imbalanced Node Classificationcited by 4
- 2023Towards Label Position Bias in Graph Neural Networkscited by 3
- 2024Personalized One-shot Federated Graph Learning for Heterogeneous Clientscited by 3
- 2024Faster Local Solvers for Graph Diffusion Equationscited by 2
- 2025Toward Scalable Graph Unlearning: A Node Influence Maximization based Approachcited by 2
- 2025Mitigating Message Imbalance in Fraud Detection with Dual-View Graph Representation Learningcited by 2
- 2023Using Active Learning Methods to Strategically Select Essays for Automated Scoringcited by 1
- 2023Shared Growth of Graph Neural Networks via Prompted Free-direction Knowledge Distillationcited by 1
- 2024Class-Balanced and Reinforced Active Learning on Graphscited by 1
- 2024Automated Loss function Search for Class-imbalanced Node Classificationcited by 1
- 2025GRNFormer: A Biologically-Guided Framework for Integrating Gene Regulatory Networks into RNA Foundation Modelscited by 1
- 2025NodeReg: Mitigating the Imbalance and Distribution Shift Effects in Semi-Supervised Node Classification via Norm Consistencycited by 1
- 2025NeuBM: Mitigating Model Bias in Graph Neural Networks through Neutral Input Calibrationcited by 1
- 2025GraphIFE: Rethinking Graph Imbalance Node Classification via Invariant Learningcited by 1
- 2025A Re-node Self-training Approach for Deep Graph-based Semi-supervised Classification on Multi-view Image Datacited by 1
- 2026Identifying and Correcting Label Noise for Robust GNNs via Influence Contradictioncited by 1
- 2026Multi-Label Node Classification with Label Influence Propagationcited by 1
- 2022Imbalanced Node Processing Method in Graph Neural Network Classification Taskcited by 0
- 2023VIGraph: Generative Self-supervised Learning for Class-Imbalanced Node Classificationcited by 0
- 2025UPL: Uncertainty-aware Pseudo-labeling for Imbalance Transductive Node Classificationcited by 0
50 most cited of 56 All 56 (JSON)
- 2026MDTE: Minority-Aware Diffusion over Temporal Edge Events for Imbalanced Node Classification25 Aug 2026
- 2026NodeImport: Imbalanced Node Classification with Node Importance Assessment15 Jul 2026
- 2026Multi-Label Node Classification with Label Influence Propagation1 Jul 2026
- 2026Graph Computation Meets Circuit Algebra: A Task-Aligned Analysis of Graph Neural Networks for Electronic Design Automation8 May 2026
- 2026GraphSB: Boosting Imbalanced Node Classification on Graphs through Structural Balance27 Jan 2026
- 2026Identifying and Correcting Label Noise for Robust GNNs via Influence Contradiction24 Jan 2026
- 2025GraphSB: Boosting Imbalanced Node Classification on Graphs through Structural Balance13 Nov 2025
- 2025A Re-node Self-training Approach for Deep Graph-based Semi-supervised Classification on Multi-view Image Data27 Oct 2025
- 2025Pure Node Selection for Imbalanced Graph Node Classification28 Sep 2025
- 2025GraphIFE: Rethinking Graph Imbalance Node Classification via Invariant Learning28 Sep 2025
- 2025Mitigating Message Imbalance in Fraud Detection with Dual-View Graph Representation Learning9 Jul 2025
- 2025NeuBM: Mitigating Model Bias in Graph Neural Networks through Neutral Input Calibration21 May 2025
38 more
- 2025NodeReg: Mitigating the Imbalance and Distribution Shift Effects in Semi-Supervised Node Classification via Norm Consistency5 Mar 2025
- 2025GRNFormer: A Biologically-Guided Framework for Integrating Gene Regulatory Networks into RNA Foundation Models3 Mar 2025
- 2025A Comprehensive Survey on Imbalanced Data Learning13 Feb 2025
- 2025IceBerg: Debiased Self-Training for Class-Imbalanced Node Classification10 Feb 2025
- 2025UPL: Uncertainty-aware Pseudo-labeling for Imbalance Transductive Node Classification2 Feb 2025
- 2025Toward Scalable Graph Unlearning: A Node Influence Maximization based Approach21 Jan 2025
- 2024Personalized One-shot Federated Graph Learning for Heterogeneous Clients18 Nov 2024
- 2024Faster Local Solvers for Graph Diffusion Equations29 Oct 2024
- 2024Leveraging Invariant Principle for Heterophilic Graph Structure Distribution Shifts18 Aug 2024
- 2024DIVE: Subgraph Disagreement for Graph Out-of-Distribution Generalization8 Aug 2024
- 2024Rethinking Fair Graph Neural Networks from Re-balancing16 Jul 2024
- 2024Edge Classification on Graphs: New Directions in Topological Imbalance17 Jun 2024
- 2024Automated Loss function Search for Class-imbalanced Node Classification23 May 2024
- 2024LOGIN: A Large Language Model Consulted Graph Neural Network Training Framework22 May 2024
- 2024A Survey of Graph Neural Networks in Real world: Imbalance, Noise, Privacy and OOD Challenges7 Mar 2024
- 2024Mitigating Label Noise on Graph via Topological Sample Selection4 Mar 2024
- 2024Class-Balanced and Reinforced Active Learning on Graphs15 Feb 2024
- 2024Disambiguated Node Classification with Graph Neural Networks13 Feb 2024
- 2023NodeMixup: Tackling Under-Reaching for Graph Neural Networks20 Dec 2023
- 2023VIGraph: Generative Self-supervised Learning for Class-Imbalanced Node Classification2 Nov 2023
- 2023Rethinking Semi-Supervised Imbalanced Node Classification from Bias-Variance Decomposition28 Oct 2023
- 2023Towards Data-centric Graph Machine Learning: Review and Outlook20 Sep 2023
- 2023Semi-supervised Domain Adaptation in Graph Transfer Learning19 Sep 2023
- 2023Class-Imbalanced Graph Learning without Class Rebalancing27 Aug 2023
- 2023A Survey of Imbalanced Learning on Graphs: Problems, Techniques, and Future Directions26 Aug 2023
- 2023Shared Growth of Graph Neural Networks via Prompted Free-direction Knowledge Distillation2 Jul 2023
- 2023GraphSHA: Synthesizing Harder Samples for Class-Imbalanced Node Classification16 Jun 2023
- 2023BeMap: Balanced Message Passing for Fair Graph Neural Network7 Jun 2023
- 2023Towards Label Position Bias in Graph Neural Networks25 May 2023
- 2023Leveraging Label Non-Uniformity for Node Classification in Graph Neural Networks29 Apr 2023
- 2023Imbalanced Node Classification Beyond Homophilic Assumption28 Apr 2023
- 2023Hyperbolic Geometric Graph Representation Learning for Hierarchy-imbalance Node Classification11 Apr 2023
- 2023Class-Imbalanced Learning on Graphs: A Survey9 Apr 2023
- 2023Semantic-aware Node Synthesis for Imbalanced Heterogeneous Information Networks27 Feb 2023
- 2023Over-Sampling Strategy in Feature Space for Graphs based Class-imbalanced Bot Detection14 Feb 2023
- 2023Joint Edge-Model Sparse Learning is Provably Efficient for Graph Neural Networks6 Feb 2023
- 2023Using Active Learning Methods to Strategically Select Essays for Automated Scoring2 Jan 2023
- 2022TopoImb: Toward Topology-level Imbalance in Learning from Graphs16 Dec 2022
50 newest of 56 All 56 (JSON)
- 2024A Survey of Graph Neural Networks in Real world: Imbalance, Noise, Privacy and OOD Challengescited by 54
- 2022TAM: Topology-Aware Margin Loss for Class-Imbalanced Node Classificationcited by 41
- 2022Position-aware Structure Learning for Graph Topology-imbalance by Relieving Under-reaching and Over-squashingcited by 31
- 2023Class-Imbalanced Graph Learning without Class Rebalancingcited by 29
- 2023Semi-supervised Domain Adaptation in Graph Transfer Learningcited by 27
- 2023Class-Imbalanced Learning on Graphs: A Surveycited by 24
- 2023Hyperbolic Geometric Graph Representation Learning for Hierarchy-imbalance Node Classificationcited by 23
- 2022FreeKD: Free-direction Knowledge Distillation for Graph Neural Networkscited by 22
- 2023GraphSHA: Synthesizing Harder Samples for Class-Imbalanced Node Classificationcited by 17
- 2023Joint Edge-Model Sparse Learning is Provably Efficient for Graph Neural Networkscited by 16
- 2023A Survey of Imbalanced Learning on Graphs: Problems, Techniques, and Future Directionscited by 15
- 2023Towards Data-centric Graph Machine Learning: Review and Outlookcited by 15
12 most cited of 55 All 55 (JSON)
- 2026MDTE: Minority-Aware Diffusion over Temporal Edge Events for Imbalanced Node Classification25 Aug 2026
- 2026NodeImport: Imbalanced Node Classification with Node Importance Assessment15 Jul 2026
- 2026Multi-Label Node Classification with Label Influence Propagation1 Jul 2026
- 2026Graph Computation Meets Circuit Algebra: A Task-Aligned Analysis of Graph Neural Networks for Electronic Design Automation8 May 2026
- 2026GraphSB: Boosting Imbalanced Node Classification on Graphs through Structural Balance27 Jan 2026
- 2026Identifying and Correcting Label Noise for Robust GNNs via Influence Contradiction24 Jan 2026
- 2025GraphSB: Boosting Imbalanced Node Classification on Graphs through Structural Balance13 Nov 2025
- 2025A Re-node Self-training Approach for Deep Graph-based Semi-supervised Classification on Multi-view Image Data27 Oct 2025
- 2025Pure Node Selection for Imbalanced Graph Node Classification28 Sep 2025
- 2025GraphIFE: Rethinking Graph Imbalance Node Classification via Invariant Learning28 Sep 2025
- 2025Mitigating Message Imbalance in Fraud Detection with Dual-View Graph Representation Learning9 Jul 2025
- 2025NeuBM: Mitigating Model Bias in Graph Neural Networks through Neutral Input Calibration21 May 2025
12 newest of 55 All 55 (JSON)