Hierarchical Self-Prompting SAM: A Prompt-Free Medical Image Segmentation Framework
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Abstract (arXiv)
Although the Segment Anything Model (SAM) is highly effective in natural image segmentation, it requires dependencies on prompts, which limits its applicability to medical imaging where manual prompts are often unavailable. Existing efforts to fine-tune SAM for medical segmentation typically struggle to remove this dependency. We propose Hierarchical Self-Prompting SAM (HSP-SAM), a novel self-prompting framework that enables SAM to achieve strong performance in prompt-free medical image segmentation. Unlike previous self-prompting methods that remain limited to positional prompts similar to vanilla SAM, we are the first to introduce learning abstract prompts during the self-prompting process. This simple and intuitive self-prompting framework achieves superior performance on classic segmentation tasks such as polyp and skin lesion segmentation, while maintaining robustness across diverse medical imaging modalities. Furthermore, it exhibits strong generalization to unseen datasets, achieving improvements of up to 14.04% over previous state-of-the-art methods on some challenging benchmarks. These results suggest that abstract prompts encapsulate richer and higher-dimensional semantic information compared to positional prompts, thereby enhancing the model's robustness and generalization performance. All models and codes will be released upon acceptance.
Key facts. Cited by 4 papers in the map (data through 14 Oct 2026). Builds on 42 of its 58 references that are in the map. First posted on arXiv 3 Jun 2025.
Builds on
42 of 58 references.
References · 42
- 2015U-Net: Convolutional Networks for Biomedical Image Segmentationcited by 19,713
- 2023Segment Anythingcited by 8,234
- 2016V-Net: Fully Convolutional Neural Networks for Volumetric Medical Image Segmentationcited by 2,292
- 2021TransUNet: Transformers Make Strong Encoders for Medical Image Segmentationcited by 1,558
- 2018UNet++: A Nested U-Net Architecture for Medical Image Segmentationcited by 1,525
- 2018Attention U-Net: Learning Where to Look for the Pancreascited by 1,435
- 2022Conditional Prompt Learning for Vision-Language Modelscited by 1,433
- 2020Making Pre-trained Language Models Better Few-shot Learnerscited by 1,256
- 2019How Can We Know What Language Models Know?cited by 959
- 2021Learning to Prompt for Continual Learningcited by 944
- 2022Swin UNETR: Swin Transformers for Semantic Segmentation of Brain Tumors in MRI Imagescited by 830
- 2022AdaptFormer: Adapting Vision Transformers for Scalable Visual Recognitioncited by 719
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- 2022MaPLe: Multi-modal Prompt Learningcited by 687
- 2019Skin Lesion Analysis Toward Melanoma Detection 2018: A Challenge Hosted by the International Skin Imaging Collaboration (ISIC)cited by 669
- 2019Kvasir-SEG: A Segmented Polyp Datasetcited by 589
- 2023Medical SAM Adapter: Adapting Segment Anything Model for Medical Image Segmentationcited by 490
- 2020PraNet: Parallel Reverse Attention Network for Polyp Segmentationcited by 460
- 2023Faster Segment Anything: Towards Lightweight SAM for Mobile Applicationscited by 352
- 2024VM-UNet: Vision Mamba UNet for Medical Image Segmentationcited by 287
- 2023Customized Segment Anything Model for Medical Image Segmentationcited by 280
- 2018Attention Gated Networks: Learning to Leverage Salient Regions in Medical Imagescited by 272
- 2021TransFuse: Fusing Transformers and CNNs for Medical Image Segmentationcited by 258
- 2016A Benchmark for Endoluminal Scene Segmentation of Colonoscopy Imagescited by 221
- 2023EfficientSAM: Leveraged Masked Image Pretraining for Efficient Segment Anythingcited by 188
- 2020Medical Image Segmentation Using Deep Learning: A Surveycited by 164
- 2021Polyp-PVT: Polyp Segmentation with Pyramid Vision Transformerscited by 159
- 2021OpenPrompt: An Open-source Framework for Prompt-learningcited by 148
- 2021Causality-inspired Single-source Domain Generalization for Medical Image Segmentationcited by 119
- 2021UACANet: Uncertainty Augmented Context Attention for Polyp Segmentationcited by 61
- 2022MALUNet: A Multi-Attention and Light-weight UNet for Skin Lesion Segmentationcited by 59
- 2023EGE-UNet: an Efficient Group Enhanced UNet for skin lesion segmentationcited by 53
- 2024Text Prompt with Normality Guidance for Weakly Supervised Video Anomaly Detectioncited by 49
- 2024Unleashing the Potential of SAM for Medical Adaptation via Hierarchical Decodingcited by 48
- 2023EdgeSAM: Prompt-In-the-Loop Distillation for SAMcited by 41
- 2017ISIC 2017 - Skin Lesion Analysis Towards Melanoma Detectioncited by 34
- 2024Modality-agnostic Domain Generalizable Medical Image Segmentation by Multi-Frequency in Multi-Scale Attentioncited by 26
- 2023RepViT-SAM: Towards Real-Time Segmenting Anythingcited by 17
- 2023ZePT: Zero-Shot Pan-Tumor Segmentation via Query-Disentangling and Self-Promptingcited by 15
- 2025Self-Prompt SAM: Medical Image Segmentation via Automatic Prompt SAM Adaptationcited by 12
- 2024De-LightSAM: Modality-Decoupled Lightweight SAM for Generalizable Medical Segmentationcited by 11
- 2024SAM-SP: Self-Prompting Makes SAM Great Againcited by 8
- 2024SAM-Lightening: A Lightweight Segment Anything Model with Dilated Flash Attention to Achieve 30 times Accelerationcited by 7
Built on by
Citing papers per year: 2025: 2; 2026: 2.
4 papers.
- 2025MIQ-SAM3D: From Single-Point Prompt to Multi-Instance Segmentation via Competitive Query Refinementcited by 0
- 2025Granular Computing-driven SAM: From Coarse-to-Fine Guidance for Prompt-Free Segmentationcited by 0
- 2026IP-SAM: Rethinking Prompt-Conditioned Segmentation for Prompt-Absent Deploymentcited by 0
- 2026SetPlanner: A Lightweight Plug-in Point-Set Planner for Frozen SAMcited by 0
- 2026SetPlanner: A Lightweight Plug-in Point-Set Planner for Frozen SAM16 Sep 2026
- 2026IP-SAM: Rethinking Prompt-Conditioned Segmentation for Prompt-Absent Deployment28 Mar 2026
- 2025Granular Computing-driven SAM: From Coarse-to-Fine Guidance for Prompt-Free Segmentation24 Nov 2025
- 2025MIQ-SAM3D: From Single-Point Prompt to Multi-Instance Segmentation via Competitive Query Refinement3 Nov 2025