mlsanityData to 14 Oct 2026

Publicly Shareable Clinical Large Language Model Built on Synthetic Clinical Notes

arXiv 2309.00237 ↗First posted 1 Sep 2023cs.CL cs.AIcited by 51

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Abstract (arXiv)

The development of large language models tailored for handling patients' clinical notes is often hindered by the limited accessibility and usability of these notes due to strict privacy regulations. To address these challenges, we first create synthetic large-scale clinical notes using publicly available case reports extracted from biomedical literature. We then use these synthetic notes to train our specialized clinical large language model, Asclepius. While Asclepius is trained on synthetic data, we assess its potential performance in real-world applications by evaluating it using real clinical notes. We benchmark Asclepius against several other large language models, including GPT-3.5-turbo and other open-source alternatives. To further validate our approach using synthetic notes, we also compare Asclepius with its variants trained on real clinical notes. Our findings convincingly demonstrate that synthetic clinical notes can serve as viable substitutes for real ones when constructing high-performing clinical language models. This conclusion is supported by detailed evaluations conducted by both GPT-4 and medical professionals. All resources including weights, codes, and data used in the development of Asclepius are made publicly accessible for future research. (https://github.com/starmpcc/Asclepius)

Key facts. Cited by 51 papers in the map (data through 14 Oct 2026). Builds on 22 of its 56 references that are in the map. First posted on arXiv 1 Sep 2023.

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22 of 56 references.

References · 22

  1. 2017Attention Is All You Needcited by 60,361
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  3. 2020Language Models are Few-Shot Learnerscited by 32,419
  4. 2022Training language models to follow instructions with human feedbackcited by 15,971
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10 more
  1. 2023MedAlpaca -- An Open-Source Collection of Medical Conversational AI Models and Training Datacited by 286
  2. 2022GatorTron: A Large Clinical Language Model to Unlock Patient Information from Unstructured Electronic Health Recordscited by 238
  3. 2022Large Language Models are Few-Shot Clinical Information Extractorscited by 207
  4. 2022Can large language models reason about medical questions?cited by 194
  5. 2023DeID-GPT: Zero-shot Medical Text De-Identification by GPT-4cited by 130
  6. 2023Do We Still Need Clinical Language Models?cited by 98
  7. 2023A Comparative Study of Pretrained Language Models for Long Clinical Textcited by 35
  8. 2023Evaluation of GPT-3.5 and GPT-4 for supporting real-world information needs in healthcare deliverycited by 30
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  10. 2022Learning to Ask Like a Physiciancited by 16

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Cited by year (2026 to 14 Oct)

Citing papers per year: 2023: 1; 2024: 27; 2025: 11; 2026: 12.

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  1. 2024Benchmarking Large Language Models on Answering and Explaining Challenging Medical Questionscited by 109
  2. 2024Health-LLM: Large Language Models for Health Prediction via Wearable Sensor Datacited by 66
  3. 2024MedExQA: Medical Question Answering Benchmark with Multiple Explanationscited by 60
  4. 2024EHRNoteQA: An LLM Benchmark for Real-World Clinical Practice Using Discharge Summariescited by 35
  5. 2024JMLR: Joint Medical LLM and Retrieval Training for Enhancing Reasoning and Professional Question Answering Capabilitycited by 32
  6. 2024MedFuzz: Exploring the Robustness of Large Language Models in Medical Question Answeringcited by 26
  7. 2023BioInstruct: Instruction Tuning of Large Language Models for Biomedical Natural Language Processingcited by 25
  8. 2024Open (Clinical) LLMs are Sensitive to Instruction Phrasingscited by 24
  9. 2024ClinicalMamba: A Generative Clinical Language Model on Longitudinal Clinical Notescited by 22
  10. 2025Benign Samples Matter! Fine-tuning On Outlier Benign Samples Severely Breaks Safetycited by 22
  11. 2025A Modular Approach for Clinical SLMs Driven by Synthetic Data with Pre-Instruction Tuning, Model Merging, and Clinical-Tasks Alignmentcited by 20
  12. 2024Do Large Language Models Align with Core Mental Health Counseling Competencies?cited by 19
38 more
  1. 2024A Survey on Large Language Models from General Purpose to Medical Applications: Datasets, Methodologies, and Evaluationscited by 16
  2. 2024Synthetic Data Generation with LLM for Improved Depression Predictioncited by 13
  3. 2024Towards Adapting Open-Source Large Language Models for Expert-Level Clinical Note Generationcited by 9
  4. 2024CliBench: A Multifaceted and Multigranular Evaluation of Large Language Models for Clinical Decision Makingcited by 8
  5. 2024BioMamba: Domain-Adaptive Biomedical Language Modelscited by 8
  6. 2024DPPA: Pruning Method for Large Language Model to Model Mergingcited by 7
  7. 2024CLIMB: A Benchmark of Clinical Bias in Large Language Modelscited by 7
  8. 2024WisPerMed at "Discharge Me!": Advancing Text Generation in Healthcare with Large Language Models, Dynamic Expert Selection, and Priming Techniques on MIMIC-IVcited by 6
  9. 2025Lossless Compression of Large Language Model-Generated Text via Next-Token Predictioncited by 5
  10. 2024SNOBERT: A Benchmark for clinical notes entity linking in the SNOMED CT clinical terminologycited by 4
  11. 2024Entity Decomposition with Filtering: A Zero-Shot Clinical Named Entity Recognition Frameworkcited by 4
  12. 2024Impact of Large Language Model Assistance on Patients Reading Clinical Notes: A Mixed-Methods Studycited by 3
  13. 2024Synth-SBDH: A Synthetic Dataset of Social and Behavioral Determinants of Health for Clinical Textcited by 3
  14. 2024Disease Entity Recognition and Normalization is Improved with Large Language Model Derived Synthetic Normalized Mentionscited by 3
  15. 2025A Scoping Review of Synthetic Data Generation by Language Models in Biomedical Research and Application: Data Utility and Quality Perspectivescited by 3
  16. 2026SoK: Privacy-aware LLM in Healthcare: Threat Model, Privacy Techniques, Challenges and Recommendationscited by 3
  17. 2026Faithfulness vs. Safety: Evaluating LLM Behavior Under Counterfactual Medical Evidencecited by 3
  18. 2024Detecting the Clinical Features of Difficult-to-Treat Depression using Synthetic Data from Large Language Modelscited by 2
  19. 2024ViT3D Alignment of LLaMA3: 3D Medical Image Report Generationcited by 2
  20. 2024A Causal Framework for Precision Rehabilitationcited by 2
  21. 2024Rephrasing Electronic Health Records for Pretraining Clinical Language Modelscited by 2
  22. 2026RouteScan: A Non-Intrusive Approach to Auditing MoE LLMs Safety via Expert Routing Telemetrycited by 2
  23. 2024Eir: Thai Medical Large Language Modelscited by 1
  24. 2025Towards Conditioning Clinical Text Generation for User Controlcited by 1
  25. 2025EchoQA: A Large Collection of Instruction Tuning Data for Echocardiogram Reportscited by 1
  26. 2025Privacy-Preserving Generation of Clinical Narratives from Medical Terminologiescited by 1
  27. 2025Building a Silver-Standard Dataset from NICE Guidelines for Clinical LLMscited by 1
  28. 2025Mitigating hallucinations in healthcare LLMs with granular fact-checking and domain-specific adaptationcited by 1
  29. 2026Comparative Analysis of Large Language Models in Healthcarecited by 1
  30. 2025RLDBF: Enhancing LLMs Via Reinforcement Learning With DataBase FeedBackcited by 0
  31. 2025DENSE: Longitudinal Progress Note Generation with Temporal Modeling of Heterogeneous Clinical Notes Across Hospital Visitscited by 0
  32. 2026Almost Clinical: Linguistic properties of synthetic electronic health recordscited by 0
  33. 2026ReToP: Learning to Rewrite Electronic Health Records for Clinical Predictioncited by 0
  34. 2026Task-Centric Acceleration of Small-Language Modelscited by 0
  35. 2026Systematic Evaluation of the Quality of Synthetic Clinical Notes Rephrased by LLMs at Million-Note Scalecited by 0
  36. 2026AMNESIA: A Large Scale Medical Unlearning Benchmark Suite with Disease-Informed Analysiscited by 0
  37. 2026ClinicalMC: A Benchmark for Multi-Course Clinical Decision-Making with Large Language Modelscited by 0
  38. 2026Clinical Intent Extraction: A FHIR-Aligned Representation and the CIRCA Benchmarkcited by 0

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