mlsanityData to 7 Oct 2026

Clinical Intent Extraction: A FHIR-Aligned Representation and the CIRCA Benchmark

arXiv 2609.29479 ↗First posted 24 Aug 2026cs.CLcited by 0

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Abstract (arXiv)

Prospective clinical actions, the follow-ups, orders, referrals, and instructions that deter-mine what happens to a patient next, are annotated today in thin fragments across incom-patible corpora: each records a text span and one coarse category. We introduce Clinical Intent Extraction (CIE), the task of recovering these actions as complete structured rec-ords, and the Clinical Intent Representation (CIR), which decomposes each action into its verb, type, coded target, timing, and condition, and adds two axes prior datasets do not jointly represent: request-intent, the authority behind the action (proposal, plan, order, or option, aligned to HL7 FHIR), and modality, a seven-valued scale of clinical strength. Re-expressing five heterogeneous corpora (CLIP, MedDec, ap_parsing, PaniniQA, SIMORD) in the CIR yields CIRCA: 10,011 harmonized intents spanning two note distributions, with a human-validated subset, source-to-CIR crosswalks, and a deterministic FHIR R4 mapper. CIRCA is built by three-model consensus that auto-accepts high-agreement in-tents and routes the rest to human review; the audited agreement stratum matches human decisions 88.4% of the time. Benchmarking five existing models without task-specific training exposes the gap CIRCA targets: given the span, they label type well (85 to 91%) but get all four closed fields right only 18 to 35% of the time. All artifacts are released, with MIMIC-derived layers shared as stand-off annotations under PhysioNet credentialed access.

Key facts. No citing papers in the map yet (data through 7 Oct 2026). Builds on 23 of its 45 references that are in the map. First posted on arXiv 24 Aug 2026.

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23 of 45 references.

References · 23

  1. 2023Judging LLM-as-a-Judge with MT-Bench and Chatbot Arenacited by 8,393
  2. 2022Self-Consistency Improves Chain of Thought Reasoning in Language Modelscited by 5,601
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  4. 2020Don't Stop Pretraining: Adapt Language Models to Domains and Taskscited by 1,548
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  6. 2021RadGraph: Extracting Clinical Entities and Relations from Radiology Reportscited by 310
  7. 2023Can Large Language Models Transform Computational Social Science?cited by 245
  8. 2023AnnoLLM: Making Large Language Models to Be Better Crowdsourced Annotatorscited by 171
  9. 2023Does Synthetic Data Generation of LLMs Help Clinical Text Mining?cited by 151
  10. 2023ACI-BENCH: a Novel Ambient Clinical Intelligence Dataset for Benchmarking Automatic Visit Note Generationcited by 116
  11. 2023ChatGPT-4 Outperforms Experts and Crowd Workers in Annotating Political Twitter Messages with Zero-Shot Learningcited by 97
  12. 2023LLMs Accelerate Annotation for Medical Information Extractioncited by 77
11 more
  1. 2023Automated Annotation with Generative AI Requires Validationcited by 75
  2. 2023Publicly Shareable Clinical Large Language Model Built on Synthetic Clinical Notescited by 51
  3. 2023PaniniQA: Enhancing Patient Education Through Interactive Question Answeringcited by 21
  4. 2019Towards Automatic Generation of Shareable Synthetic Clinical Notes Using Neural Language Modelscited by 20
  5. 2021CLIP: A Dataset for Extracting Action Items for Physicians from Hospital Discharge Notescited by 18
  6. 2019Extraction and Analysis of Clinically Important Follow-up Recommendations in a Large Radiology Datasetcited by 5
  7. 2025Overview of the MEDIQA-OE 2025 Shared Task on Medical Order Extraction from Doctor-Patient Consultationscited by 2
  8. 2026IRC-Bench: Recognizing Entities from Contextual Cues in First-Person Reminiscencescited by 2
  9. 2026CoEval: Ranking Language Models for Custom Tasks Without Labeled Data or Trustworthy Benchmarkscited by 2
  10. 2022Predicting Clinical Intent from Free Text Electronic Health Recordscited by 1
  11. 2026Three Generations of Healthcare IT: From the Digital Record to the Computable Care Processcited by 1

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