Weisfeiler and Leman go Machine Learning: The Story so far
Not on the map. Why?
Abstract (arXiv)
In recent years, algorithms and neural architectures based on the Weisfeiler--Leman algorithm, a well-known heuristic for the graph isomorphism problem, have emerged as a powerful tool for machine learning with graphs and relational data. Here, we give a comprehensive overview of the algorithm's use in a machine-learning setting, focusing on the supervised regime. We discuss the theoretical background, show how to use it for supervised graph and node representation learning, discuss recent extensions, and outline the algorithm's connection to (permutation-)equivariant neural architectures. Moreover, we give an overview of current applications and future directions to stimulate further research.
Key facts. Cited by 122 papers in the map (data through 14 Oct 2026). Builds on 110 of its 251 references that are in the map. First posted on arXiv 18 Dec 2021.
Builds on
110 of 251 references.
References · 110
- 2014Adam: A Method for Stochastic Optimizationcited by 37,240
- 2016Semi-Supervised Classification with Graph Convolutional Networkscited by 11,361
- 2017Graph Attention Networkscited by 8,923
- 2017Inductive Representation Learning on Large Graphscited by 6,320
- 2016PointNet: Deep Learning on Point Sets for 3D Classification and Segmentationcited by 5,248
- 2018How Powerful are Graph Neural Networks?cited by 4,393
- 2017Neural Message Passing for Quantum Chemistrycited by 3,487
- 2020Open Graph Benchmark: Datasets for Machine Learning on Graphscited by 2,163
- 2016Convolutional Neural Networks on Graphs with Fast Localized Spectral Filteringcited by 2,089
- 2018Graph Neural Networks: A Review of Methods and Applicationscited by 1,576
- 2017Deep Setscited by 1,421
- 2021Geometric Deep Learning: Grids, Groups, Graphs, Geodesics, and Gaugescited by 1,167
38 more
- 2016Group Equivariant Convolutional Networkscited by 1,165
- 2013Spectral Networks and Locally Connected Networks on Graphscited by 1,102
- 2017MoleculeNet: A Benchmark for Molecular Machine Learningcited by 1,051
- 2018Weisfeiler and Leman Go Neural: Higher-order Graph Neural Networkscited by 881
- 2015Convolutional Networks on Graphs for Learning Molecular Fingerprintscited by 754
- 2020TUDataset: A collection of benchmark datasets for learning with graphscited by 728
- 2020On the Bottleneck of Graph Neural Networks and its Practical Implicationscited by 631
- 2020Directional Message Passing for Molecular Graphscited by 561
- 2016Geometric deep learning on graphs and manifolds using mixture model CNNscited by 468
- 2017Scene Graph Generation by Iterative Message Passingcited by 462
- 2019Provably Powerful Graph Networkscited by 389
- 2018Invariant and Equivariant Graph Networkscited by 346
- 2020Improving Graph Neural Network Expressivity via Subgraph Isomorphism Countingcited by 313
- 2017Dynamic Edge-Conditioned Filters in Convolutional Neural Networks on Graphscited by 310
- 2020Towards Deeper Graph Neural Networkscited by 296
- 2021Weisfeiler and Lehman Go Topological: Message Passing Simplicial Networkscited by 221
- 2020Generalization and Representational Limits of Graph Neural Networkscited by 218
- 2021Weisfeiler and Lehman Go Cellular: CW Networkscited by 218
- 2019Graph Matching Networks for Learning the Similarity of Graph Structured Objectscited by 205
- 2017CayleyNets: Graph Convolutional Neural Networks with Complex Rational Spectral Filterscited by 203
- 2020The Surprising Power of Graph Neural Networks with Random Node Initializationcited by 198
- 2021Identity-aware Graph Neural Networkscited by 198
- 2020Random Features Strengthen Graph Neural Networkscited by 186
- 2019Universal Invariant and Equivariant Graph Neural Networkscited by 183
- 2019On the equivalence between graph isomorphism testing and function approximation with GNNscited by 172
- 2017SplineCNN: Fast Geometric Deep Learning with Continuous B-Spline Kernelscited by 161
- 2019What Can Neural Networks Reason About?cited by 159
- 2020Machine Learning on Graphs: A Model and Comprehensive Taxonomycited by 156
- 2021From Stars to Subgraphs: Uplifting Any GNN with Local Structure Awarenesscited by 155
- 2021Equivariant Subgraph Aggregation Networkscited by 154
- 2019On the Universality of Invariant Networkscited by 152
- 2019Relational Pooling for Graph Representationscited by 150
- 2019A Survey on Graph Kernelscited by 148
- 2017Equivariance Through Parameter-Sharingcited by 141
- 2021Nested Graph Neural Networkscited by 137
- 2020Directional Graph Networkscited by 133
- 2018Universal approximations of invariant maps by neural networkscited by 127
- 2021DropGNN: Random Dropouts Increase the Expressiveness of Graph Neural Networkscited by 118
50 most cited of 110 All 110 (JSON)
Built on by
Citing papers per year: 2022: 30; 2023: 21; 2024: 31; 2025: 22; 2026: 18.
122 papers.
Sort:
By area:
- 2022Sign and Basis Invariant Networks for Spectral Graph Representation Learningcited by 179
- 2022Learning Causally Invariant Representations for Out-of-Distribution Generalization on Graphscited by 144
- 2023Rethinking the Expressive Power of GNNs via Graph Biconnectivitycited by 119
- 2022Understanding and Extending Subgraph GNNs by Rethinking Their Symmetriescited by 112
- 2023Equivariant Architectures for Learning in Deep Weight Spacescited by 107
- 2023On the Expressive Power of Geometric Graph Neural Networkscited by 90
- 2023Attending to Graph Transformerscited by 83
- 2024Understanding Transformer Reasoning Capabilities via Graph Algorithmscited by 67
- 2022Ordered Subgraph Aggregation Networkscited by 57
- 2022Graph Filters for Signal Processing and Machine Learning on Graphscited by 53
- 2022A Theoretical Comparison of Graph Neural Network Extensionscited by 48
- 2022Message passing all the way upcited by 47
38 more
- 2023A new perspective on building efficient and expressive 3D equivariant graph neural networkscited by 47
- 2022GraphGDP: Generative Diffusion Processes for Permutation Invariant Graph Generationcited by 43
- 2024Beyond Weisfeiler-Lehman: A Quantitative Framework for GNN Expressivenesscited by 39
- 2022Low Dimensional Invariant Embeddings for Universal Geometric Learningcited by 38
- 2022OOD Link Prediction Generalization Capabilities of Message-Passing GNNs in Larger Test Graphscited by 38
- 2023Equivariant Polynomials for Graph Neural Networkscited by 38
- 2022SpeqNets: Sparsity-aware Permutation-equivariant Graph Networkscited by 37
- 2023WL meet VCcited by 31
- 2023Graph Positional Encoding via Random Feature Propagationcited by 31
- 2022Towards Better Out-of-Distribution Generalization of Neural Algorithmic Reasoning Taskscited by 30
- 2022Graph Neural Networks with Adaptive Readoutscited by 29
- 2022Weisfeiler and Leman Go Relationalcited by 28
- 2023SwinGNN: Rethinking Permutation Invariance in Diffusion Models for Graph Generationcited by 28
- 2023The Descriptive Complexity of Graph Neural Networkscited by 26
- 2023Probabilistically Rewired Message-Passing Neural Networkscited by 26
- 2023Fine-grained Expressivity of Graph Neural Networkscited by 25
- 2022Generalized Laplacian Positional Encoding for Graph Representation Learningcited by 21
- 2022Exponentially Improving the Complexity of Simulating the Weisfeiler-Lehman Test with Graph Neural Networkscited by 21
- 2023Curvature Filtrations for Graph Generative Model Evaluationcited by 19
- 2023On the Expressivity of Persistent Homology in Graph Learningcited by 19
- 2025Oversmoothing, Oversquashing, Heterophily, Long-Range, and more: Demystifying Common Beliefs in Graph Machine Learningcited by 19
- 2024TopoTune : A Framework for Generalized Combinatorial Complex Neural Networkscited by 18
- 2023Efficient Subgraph GNNs by Learning Effective Selection Policiescited by 17
- 20221-WL Expressiveness Is (Almost) All You Needcited by 15
- 2024Probabilistic Graph Rewiring via Virtual Nodescited by 15
- 2024On the Expressive Power of Spectral Invariant Graph Neural Networkscited by 15
- 2025A Survey of Graph Transformers: Architectures, Theories and Applicationscited by 14
- 2024Weisfeiler-Leman at the margin: When more expressivity matterscited by 13
- 2022Graph neural networks for the prediction of molecular structure-property relationshipscited by 12
- 2022On the Ability of Graph Neural Networks to Model Interactions Between Verticescited by 12
- 2022A Simple and Universal Rotation Equivariant Point-cloud Networkcited by 11
- 2022From Local to Global: Spectral-Inspired Graph Neural Networkscited by 11
- 2024Towards Principled Graph Transformerscited by 11
- 2024Weisfeiler Leman for Euclidean Equivariant Machine Learningcited by 10
- 2025How simple can you go? An off-the-shelf transformer approach to molecular dynamicscited by 10
- 2022Weisfeiler and Leman Go Walking: Random Walk Kernels Revisitedcited by 9
- 2023Three iterations of (d-1)-WL test distinguish non isometric clouds of d-dimensional pointscited by 9
- 2024Improving the Expressiveness of K-hop Message-Passing GNNs by Injecting Contextualized Substructure Informationcited by 9
50 most cited of 122 All 122 (JSON)
- 2026The Expressive Power of Random-Feature MPNNs Across Graph Sizes8 Oct 2026
- 2026Converse and Collision-Based Achievability for Node Localization with Hybrid Distance-Spectral Graph Positional Encodings31 Aug 2026
- 2026A Unifying Relational Perspective on Expressive Lottery Tickets19 Aug 2026
- 2026Scaling Weisfeiler-Leman Expressiveness Analysis to Massive Graphs with GPUs1 Jul 2026
- 2026Weisfeiler-Leman Is Incomplete on Simple Spectrum Graphs, so Canonicalize Them22 May 2026
- 2026The WidthWall: A Strict Expressivity Hierarchy for Hypergraph Neural Networks13 May 2026
- 2026Have Graph -- Will Lift? The Case for Higher-Order Benchmarks8 May 2026
- 2026No Triangulation Without Representation: Generalization in Topological Deep Learning7 May 2026
- 2026Measuring Structure in Graph Benchmark Datasets Using Graph Invariants7 May 2026
- 2026Geometry-Aware Simplicial Message Passing7 May 2026
- 2026On the Expressive Power of GNNs to Solve Linear SDPs30 Apr 2026
- 2026Path-Based Gradient Boosting for Graph-Level Prediction26 Apr 2026
38 more
- 2026The Logical Expressiveness of Topological Neural Networks21 Apr 2026
- 2026Learning to Approximate Uniform Facility Location via Graph Neural Networks13 Feb 2026
- 2026Graph Learning Should Move Beyond Restrictive Views of Spectral and Message-Passing GNNs10 Feb 2026
- 2026Weisfeiler and Lehman Go Categorical6 Feb 2026
- 2026XIMP: Cross Graph Inter-Message Passing for Molecular Property Prediction26 Jan 2026
- 2026Learning from Historical Activations in Graph Neural Networks3 Jan 2026
- 2025On topological descriptors for graph products12 Nov 2025
- 2025Sketch-Augmented Features Improve Learning Long-Range Dependencies in Graph Neural Networks5 Nov 2025
- 2025Graph Homomorphism Distortion: A structural (pseudo)-metric for attributed graphs4 Nov 2025
- 2025On the Rademacher Complexity of Graph Neural Networks: Unifying Expressivity and Geometry11 Oct 2025
- 2025If you can distinguish, you can express: Galois theory, Stone--Weierstrass, machine learning, and linguistics10 Oct 2025
- 2025On The Expressive Power of GNN Derivatives2 Oct 2025
- 2025Visualization and Analysis of the Loss Landscape in Graph Neural Networks15 Sep 2025
- 2025What Expressivity Theory Misses: Message Passing Complexity for GNNs1 Sep 2025
- 2025Heat Kernel Goes Topological16 Jul 2025
- 2025MILP-SAT-GNN: Yet Another Neural SAT Solver2 Jul 2025
- 2025Logical Expressiveness of Graph Neural Networks with Hierarchical Node Individualization16 Jun 2025
- 2025Graph Persistence goes Spectral6 Jun 2025
- 2025Positional Encoding meets Persistent Homology on Graphs6 Jun 2025
- 2025Spectral Graph Neural Networks are Incomplete on Graphs with a Simple Spectrum5 Jun 2025
- 2025Weisfeiler and Leman Go Gambling: Why Expressive Lottery Tickets Win4 Jun 2025
- 2025Weisfeiler and Leman Follow the Arrow of Time: Expressive Power of Message Passing in Temporal Event Graphs30 May 2025
- 2025Oversmoothing, Oversquashing, Heterophily, Long-Range, and more: Demystifying Common Beliefs in Graph Machine Learning21 May 2025
- 2025Graph Representational Learning: When Does More Expressivity Hurt Generalization?16 May 2025
- 2025On the Relationship Between Robustness and Expressivity of Graph Neural Networks18 Apr 2025
- 2025How simple can you go? An off-the-shelf transformer approach to molecular dynamics3 Mar 2025
- 2025A Survey of Graph Transformers: Architectures, Theories and Applications23 Feb 2025
- 2025Balancing Efficiency and Expressiveness: Subgraph GNNs with Walk-Based Centrality6 Jan 2025
- 2024LASE: Learned Adjacency Spectral Embeddings23 Dec 2024
- 2024Towards Graph Foundation Models: A Study on the Generalization of Positional and Structural Encodings10 Dec 2024
- 2024On the Utilization of Unique Node Identifiers in Graph Neural Networks4 Nov 2024
- 2024FSW-GNN: A Bi-Lipschitz WL-Equivalent Graph Neural Network10 Oct 2024
- 2024TopoTune : A Framework for Generalized Combinatorial Complex Neural Networks9 Oct 2024
- 2024Diss-l-ECT: Dissecting Graph Data with Local Euler Characteristic Transforms3 Oct 2024
- 2024Towards Dynamic Graph Neural Networks with Provably High-Order Expressive Power2 Oct 2024
- 2024NeuroPath: A Neural Pathway Transformer for Joining the Dots of Human Connectomes26 Sep 2024
- 2024CliquePH: Higher-Order Information for Graph Neural Networks through Persistent Homology on Clique Graphs12 Sep 2024
- 2024Synchronous Diffusion for Unsupervised Smooth Non-Rigid 3D Shape Matching11 Jul 2024
50 newest of 122 All 122 (JSON)
- 2024Understanding Transformer Reasoning Capabilities via Graph Algorithmscited by 67
- 2022Weisfeiler and Leman Go Relationalcited by 28
- 2024Understanding Transformer Reasoning Capabilities via Graph Algorithms28 May 2024
- 2022Weisfeiler and Leman Go Relational30 Nov 2022
- 2022Sign and Basis Invariant Networks for Spectral Graph Representation Learningcited by 179
- 2022Learning Causally Invariant Representations for Out-of-Distribution Generalization on Graphscited by 144
- 2023Rethinking the Expressive Power of GNNs via Graph Biconnectivitycited by 119
- 2022Understanding and Extending Subgraph GNNs by Rethinking Their Symmetriescited by 112
- 2023Equivariant Architectures for Learning in Deep Weight Spacescited by 107
- 2023On the Expressive Power of Geometric Graph Neural Networkscited by 90
- 2023Attending to Graph Transformerscited by 83
- 2022Ordered Subgraph Aggregation Networkscited by 57
- 2022Graph Filters for Signal Processing and Machine Learning on Graphscited by 53
- 2022A Theoretical Comparison of Graph Neural Network Extensionscited by 48
- 2022Message passing all the way upcited by 47
- 2023A new perspective on building efficient and expressive 3D equivariant graph neural networkscited by 47
12 most cited of 118 All 118 (JSON)
- 2026The Expressive Power of Random-Feature MPNNs Across Graph Sizes8 Oct 2026
- 2026Converse and Collision-Based Achievability for Node Localization with Hybrid Distance-Spectral Graph Positional Encodings31 Aug 2026
- 2026A Unifying Relational Perspective on Expressive Lottery Tickets19 Aug 2026
- 2026Scaling Weisfeiler-Leman Expressiveness Analysis to Massive Graphs with GPUs1 Jul 2026
- 2026Weisfeiler-Leman Is Incomplete on Simple Spectrum Graphs, so Canonicalize Them22 May 2026
- 2026The WidthWall: A Strict Expressivity Hierarchy for Hypergraph Neural Networks13 May 2026
- 2026Have Graph -- Will Lift? The Case for Higher-Order Benchmarks8 May 2026
- 2026No Triangulation Without Representation: Generalization in Topological Deep Learning7 May 2026
- 2026Measuring Structure in Graph Benchmark Datasets Using Graph Invariants7 May 2026
- 2026Geometry-Aware Simplicial Message Passing7 May 2026
- 2026On the Expressive Power of GNNs to Solve Linear SDPs30 Apr 2026
- 2026Path-Based Gradient Boosting for Graph-Level Prediction26 Apr 2026
12 newest of 118 All 118 (JSON)