mlsanityData to 7 Oct 2026

Towards Deeper Graph Neural Networks

arXiv 2007.09296 ↗First posted 18 Jul 2020cs.LG stat.MLcited by 296

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Abstract (arXiv)

Graph neural networks have shown significant success in the field of graph representation learning. Graph convolutions perform neighborhood aggregation and represent one of the most important graph operations. Nevertheless, one layer of these neighborhood aggregation methods only consider immediate neighbors, and the performance decreases when going deeper to enable larger receptive fields. Several recent studies attribute this performance deterioration to the over-smoothing issue, which states that repeated propagation makes node representations of different classes indistinguishable. In this work, we study this observation systematically and develop new insights towards deeper graph neural networks. First, we provide a systematical analysis on this issue and argue that the key factor compromising the performance significantly is the entanglement of representation transformation and propagation in current graph convolution operations. After decoupling these two operations, deeper graph neural networks can be used to learn graph node representations from larger receptive fields. We further provide a theoretical analysis of the above observation when building very deep models, which can serve as a rigorous and gentle description of the over-smoothing issue. Based on our theoretical and empirical analysis, we propose Deep Adaptive Graph Neural Network (DAGNN) to adaptively incorporate information from large receptive fields. A set of experiments on citation, co-authorship, and co-purchase datasets have confirmed our analysis and insights and demonstrated the superiority of our proposed methods.

Key facts. Cited by 296 papers in the map (data through 7 Oct 2026). First posted on arXiv 18 Jul 2020.

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Cited by year (2026 to 7 Oct)

Citing papers per year: 2021: 64; 2022: 79; 2023: 56; 2024: 53; 2025: 28; 2026: 16.

296 papers.

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  1. 2021Graph Contrastive Learning Automatedcited by 287
  2. 2023A Survey on Oversmoothing in Graph Neural Networkscited by 246
  3. 2021BernNet: Learning Arbitrary Graph Spectral Filters via Bernstein Approximationcited by 195
  4. 2023Large Language Models on Graphs: A Comprehensive Surveycited by 190
  5. 2021Self-Supervised Learning of Graph Neural Networks: A Unified Reviewcited by 184
  6. 2022Finding Global Homophily in Graph Neural Networks When Meeting Heterophilycited by 179
  7. 2021Training Graph Neural Networks with 1000 Layerscited by 169
  8. 2021Motif-based Graph Self-Supervised Learning for Molecular Property Predictioncited by 159
  9. 2021Graph Condensation for Graph Neural Networkscited by 150
  10. 2021Interpreting and Unifying Graph Neural Networks with An Optimization Frameworkcited by 131
  11. 2021Weisfeiler and Leman go Machine Learning: The Story so farcited by 121
  12. 2022Condensing Graphs via One-Step Gradient Matchingcited by 100
38 more
  1. 2021Dirichlet Energy Constrained Learning for Deep Graph Neural Networkscited by 97
  2. 2022Decoupling the Depth and Scope of Graph Neural Networkscited by 94
  3. 2022Periodic Graph Transformers for Crystal Material Property Predictioncited by 87
  4. 2021GraphEBM: Molecular Graph Generation with Energy-Based Modelscited by 85
  5. 2021Scaling Up Graph Neural Networks Via Graph Coarseningcited by 80
  6. 2023Ordered GNN: Ordering Message Passing to Deal with Heterophily and Over-smoothingcited by 67
  7. 2022A Survey on Graph Representation Learning Methodscited by 66
  8. 2022Improving Fairness in Graph Neural Networks via Mitigating Sensitive Attribute Leakagecited by 61
  9. 2021Graph Neural Networks Inspired by Classical Iterative Algorithmscited by 60
  10. 2022Does GNN Pretraining Help Molecular Representation?cited by 59
  11. 2021Cold Brew: Distilling Graph Node Representations with Incomplete or Missing Neighborhoodscited by 57
  12. 2022GREAD: Graph Neural Reaction-Diffusion Networkscited by 54
  13. 2021Automated Self-Supervised Learning for Graphscited by 50
  14. 2023GSLB: The Graph Structure Learning Benchmarkcited by 49
  15. 2021Node Dependent Local Smoothing for Scalable Graph Learningcited by 45
  16. 2021AdaGNN: Graph Neural Networks with Adaptive Frequency Response Filtercited by 43
  17. 2022Graph Neural Networks are Inherently Good Generalizers: Insights by Bridging GNNs and MLPscited by 42
  18. 2023Demystifying Structural Disparity in Graph Neural Networks: Can One Size Fit All?cited by 41
  19. 2021Sampling methods for efficient training of graph convolutional networks: A surveycited by 40
  20. 2023Dink-Net: Neural Clustering on Large Graphscited by 38
  21. 2021Bag of Tricks for Training Deeper Graph Neural Networks: A Comprehensive Benchmark Studycited by 36
  22. 2021Tree Decomposed Graph Neural Networkcited by 35
  23. 2021FedGL: Federated Graph Learning Framework with Global Self-Supervisioncited by 34
  24. 2021Molecule3D: A Benchmark for Predicting 3D Geometries from Molecular Graphscited by 31
  25. 2022GraphFM: Improving Large-Scale GNN Training via Feature Momentumcited by 31
  26. 2022DropMessage: Unifying Random Dropping for Graph Neural Networkscited by 29
  27. 2021Topological Relational Learning on Graphscited by 27
  28. 2021Imbalanced Graph Classification via Graph-of-Graph Neural Networkscited by 27
  29. 2023DAG Matters! GFlowNets Enhanced Explainer For Graph Neural Networkscited by 27
  30. 2022Spiking Graph Convolutional Networkscited by 26
  31. 2022Model Degradation Hinders Deep Graph Neural Networkscited by 26
  32. 2021Meta Propagation Networks for Graph Few-shot Semi-supervised Learningcited by 25
  33. 2023Quantifying the Knowledge in GNNs for Reliable Distillation into MLPscited by 25
  34. 2023Graph Neural Networks Use Graphs When They Shouldn'tcited by 25
  35. 2023Beyond Text: A Deep Dive into Large Language Models' Ability on Understanding Graph Datacited by 25
  36. 2021A New Perspective on the Effects of Spectrum in Graph Neural Networkscited by 24
  37. 2023Extracting Low-/High- Frequency Knowledge from Graph Neural Networks and Injecting it into MLPs: An Effective GNN-to-MLP Distillation Frameworkcited by 24
  38. 2023Towards Deep Attention in Graph Neural Networks: Problems and Remediescited by 24

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