SUGAR: Subgraph Neural Network with Reinforcement Pooling and Self-Supervised Mutual Information Mechanism
Not on the map. Why?
Abstract (arXiv)
Graph representation learning has attracted increasing research attention. However, most existing studies fuse all structural features and node attributes to provide an overarching view of graphs, neglecting finer substructures' semantics, and suffering from interpretation enigmas. This paper presents a novel hierarchical subgraph-level selection and embedding based graph neural network for graph classification, namely SUGAR, to learn more discriminative subgraph representations and respond in an explanatory way. SUGAR reconstructs a sketched graph by extracting striking subgraphs as the representative part of the original graph to reveal subgraph-level patterns. To adaptively select striking subgraphs without prior knowledge, we develop a reinforcement pooling mechanism, which improves the generalization ability of the model. To differentiate subgraph representations among graphs, we present a self-supervised mutual information mechanism to encourage subgraph embedding to be mindful of the global graph structural properties by maximizing their mutual information. Extensive experiments on six typical bioinformatics datasets demonstrate a significant and consistent improvement in model quality with competitive performance and interpretability.
Key facts. Cited by 75 papers in the map (data through 7 Oct 2026). Builds on 42 of its 64 references that are in the map. First posted on arXiv 20 Jan 2021.
Builds on
42 of 64 references.
References · 42
- 2018BERT: Pre-training of Deep Bidirectional Transformers for Language Understandingcited by 40,204
- 2016Semi-Supervised Classification with Graph Convolutional Networkscited by 11,282
- 2017Graph Attention Networkscited by 8,854
- 2019Momentum Contrast for Unsupervised Visual Representation Learningcited by 7,482
- 2017Inductive Representation Learning on Large Graphscited by 6,284
- 2018How Powerful are Graph Neural Networks?cited by 4,355
- 2017Neural Message Passing for Quantum Chemistrycited by 3,460
- 2019A Comprehensive Survey on Graph Neural Networkscited by 2,906
- 2019XLNet: Generalized Autoregressive Pretraining for Language Understandingcited by 2,801
- 2016Convolutional Neural Networks on Graphs with Fast Localized Spectral Filteringcited by 2,085
- 2018Learning deep representations by mutual information estimation and maximizationcited by 1,265
- 2018Deep Graph Infomaxcited by 1,101
30 more
- 2013Spectral Networks and Locally Connected Networks on Graphscited by 1,097
- 2015Gated Graph Sequence Neural Networkscited by 792
- 2018Hierarchical Graph Representation Learning with Differentiable Poolingcited by 786
- 2015Convolutional Networks on Graphs for Learning Molecular Fingerprintscited by 751
- 2016f-GAN: Training Generative Neural Samplers using Variational Divergence Minimizationcited by 504
- 2019Graph U-Netscited by 489
- 2020GCC: Graph Contrastive Coding for Graph Neural Network Pre-Trainingcited by 461
- 2019InfoGraph: Unsupervised and Semi-supervised Graph-Level Representation Learning via Mutual Information Maximizationcited by 441
- 2019Self-Attention Graph Poolingcited by 421
- 2018Graph Convolutional Networks for Text Classificationcited by 345
- 2016Learning Convolutional Neural Networks for Graphscited by 314
- 2020Improving Graph Neural Network Expressivity via Subgraph Isomorphism Countingcited by 312
- 2017Dynamic Edge-Conditioned Filters in Convolutional Neural Networks on Graphscited by 307
- 2018Graph R-CNN for Scene Graph Generationcited by 296
- 2017A Comprehensive Survey of Graph Embedding: Problems, Techniques and Applicationscited by 260
- 2020Graph Representation Learning via Graphical Mutual Information Maximizationcited by 217
- 2014Graph-based Anomaly Detection and Description: A Surveycited by 182
- 2019ASAP: Adaptive Structure Aware Pooling for Learning Hierarchical Graph Representationscited by 156
- 2018Adaptive Graph Convolutional Neural Networkscited by 155
- 2019A Survey on Graph Kernelscited by 148
- 2018Towards Sparse Hierarchical Graph Classifierscited by 100
- 2019Graph Convolutional Networks with EigenPoolingcited by 94
- 2020Subgraph Neural Networkscited by 73
- 2018MotifNet: a motif-based Graph Convolutional Network for directed graphscited by 63
- 2019Semi-Supervised Graph Classification: A Hierarchical Graph Perspectivecited by 55
- 2018Anonymous Walk Embeddingscited by 46
- 2018Graph Capsule Convolutional Neural Networkscited by 27
- 2018Drug Similarity Integration Through Attentive Multi-view Graph Auto-Encoderscited by 17
- 2019Subgraph Networks with Application to Structural Feature Space Expansioncited by 16
- 2020Pairwise Learning for Name Disambiguation in Large-Scale Heterogeneous Academic Networkscited by 7
Built on by
Citing papers per year: 2021: 14; 2022: 18; 2023: 17; 2024: 16; 2025: 8; 2026: 2.
75 papers.
Sort:
By area:
- 2021Graph Self-Supervised Learning: A Surveycited by 289
- 2021A Comprehensive Survey on Graph Anomaly Detection with Deep Learningcited by 230
- 2021Self-supervised Learning on Graphs: Contrastive, Generative,or Predictivecited by 136
- 2021Augmentation-Free Self-Supervised Learning on Graphscited by 94
- 2021Graph Structure Learning with Variational Information Bottleneckcited by 81
- 2023Does Graph Distillation See Like Vision Dataset Counterpart?cited by 45
- 2021Reinforced Neighborhood Selection Guided Multi-Relational Graph Neural Networkscited by 38
- 2024A Comprehensive Survey on Data Augmentationcited by 38
- 2021Prototypical Graph Contrastive Learningcited by 37
- 2023Thought Propagation: An Analogical Approach to Complex Reasoning with Large Language Modelscited by 37
- 2022MTTrans: Cross-Domain Object Detection with Mean-Teacher Transformercited by 35
- 2022Position-aware Structure Learning for Graph Topology-imbalance by Relieving Under-reaching and Over-squashingcited by 31
38 more
- 2022Subgraph Neighboring Relations Infomax for Inductive Link Prediction on Knowledge Graphscited by 26
- 2023Environment-Aware Dynamic Graph Learning for Out-of-Distribution Generalizationcited by 26
- 2024Towards Graph Contrastive Learning: A Survey and Beyondcited by 26
- 2021ACE-HGNN: Adaptive Curvature Exploration Hyperbolic Graph Neural Networkcited by 24
- 2023Hyperbolic Geometric Graph Representation Learning for Hierarchy-imbalance Node Classificationcited by 23
- 2025Graphs Meet AI Agents: Taxonomy, Progress, and Future Opportunitiescited by 23
- 2022Graph Self-supervised Learning with Accurate Discrepancy Learningcited by 21
- 2022Reinforcement learning on graphs: A surveycited by 18
- 2023From Relational Pooling to Subgraph GNNs: A Universal Framework for More Expressive Graph Neural Networkscited by 17
- 2021Graph Neural Networks: Methods, Applications, and Opportunitiescited by 16
- 2021Graph Entropy Guided Node Embedding Dimension Selection for Graph Neural Networkscited by 13
- 2024Graph Neural Networks for Brain Graph Learning: A Surveycited by 13
- 2021A Survey on Deep Learning Event Extraction: Approaches and Applicationscited by 12
- 2022Deep reinforcement learning guided graph neural networks for brain network analysiscited by 12
- 2023MAG-GNN: Reinforcement Learning Boosted Graph Neural Networkcited by 11
- 2022Data Augmentation on Graphs: A Technical Surveycited by 10
- 2022Curvature Graph Generative Adversarial Networkscited by 9
- 2024RELIEF: Reinforcement Learning Empowered Graph Feature Prompt Tuningcited by 9
- 2022Self-organization Preserved Graph Structure Learning with Principle of Relevant Informationcited by 8
- 2024GALA: Graph Diffusion-based Alignment with Jigsaw for Source-free Domain Adaptationcited by 8
- 2022SHINE: SubHypergraph Inductive Neural nEtworkcited by 7
- 2023Reinforcement Neighborhood Selection for Unsupervised Graph Anomaly Detectioncited by 7
- 2023Poincar'e Differential Privacy for Hierarchy-Aware Graph Embeddingcited by 7
- 2022Heterogeneous Graph Neural Network for Privacy-Preserving Recommendationcited by 6
- 2023State of the Art and Potentialities of Graph-level Learningcited by 6
- 20233D-Mol: A Novel Contrastive Learning Framework for Molecular Property Prediction with 3D Informationcited by 6
- 2023Contrastive Graph Pooling for Explainable Classification of Brain Networkscited by 5
- 2023Advancing Drug Discovery with Enhanced Chemical Understanding via Asymmetric Contrastive Multimodal Learningcited by 5
- 2024Dynamic Graph Information Bottleneckcited by 5
- 2024Multi-View Subgraph Neural Networks: Self-Supervised Learning with Scarce Labeled Datacited by 5
- 2025Balancing Efficiency and Expressiveness: Subgraph GNNs with Walk-Based Centralitycited by 5
- 2022Link Prediction with Contextualized Self-Supervisioncited by 4
- 2023On Exploring Node-feature and Graph-structure Diversities for Node Drop Graph Poolingcited by 4
- 2024Improving the interpretability of GNN predictions through conformal-based graph sparsificationcited by 4
- 2021Edge but not Least: Cross-View Graph Poolingcited by 3
- 2022Supervised Contrastive Learning with Structure Inference for Graph Classificationcited by 3
- 2022A Class-Aware Representation Refinement Framework for Graph Classificationcited by 3
- 2022Position-Aware Subgraph Neural Networks with Data-Efficient Learningcited by 3
50 most cited of 75 All 75 (JSON)
- 2026Global to Local: Topology-Preserving Adaptive Graph Pooling via Granular-Ball4 Sep 2026
- 2026Retrieving Minimal and Sufficient Reasoning Subgraphs with Graph Foundation Models for Path-aware GraphRAG7 Mar 2026
- 2025Learning and Editing Universal Graph Prompt Tuning via Reinforcement Learning9 Dec 2025
- 2025Graph Data Augmentation with Contrastive Learning on Covariate Distribution Shift30 Nov 2025
- 2025M-GLC: Motif-Driven Global-Local Context Graphs for Few-shot Molecular Property Prediction24 Oct 2025
- 2025Graphs Meet AI Agents: Taxonomy, Progress, and Future Opportunities22 Jun 2025
- 2025Graph Prompting for Graph Learning Models: Recent Advances and Future Directions10 Jun 2025
- 2025Soft causal learning for generalized molecule property prediction: An environment perspective7 May 2025
- 2025A Generative Graph Contrastive Learning Model with Global Signal25 Apr 2025
- 2025Balancing Efficiency and Expressiveness: Subgraph GNNs with Walk-Based Centrality6 Jan 2025
- 2024GALA: Graph Diffusion-based Alignment with Jigsaw for Source-free Domain Adaptation22 Oct 2024
- 2024Towards Fair Graph Representation Learning in Social Networks15 Oct 2024
38 more
- 2024RELIEF: Reinforcement Learning Empowered Graph Feature Prompt Tuning6 Aug 2024
- 2024Graph Structure Prompt Learning: A Novel Methodology to Improve Performance of Graph Neural Networks16 Jul 2024
- 2024Graph in Graph Neural Network30 Jun 2024
- 2024Motif-driven Subgraph Structure Learning for Graph Classification13 Jun 2024
- 2024Graph Neural Networks for Brain Graph Learning: A Survey1 Jun 2024
- 2024Towards Graph Contrastive Learning: A Survey and Beyond20 May 2024
- 2024A Comprehensive Survey on Data Augmentation15 May 2024
- 2024Multi-View Subgraph Neural Networks: Self-Supervised Learning with Scarce Labeled Data19 Apr 2024
- 2024Improving the interpretability of GNN predictions through conformal-based graph sparsification18 Apr 2024
- 2024SSHPool: The Separated Subgraph-based Hierarchical Pooling24 Mar 2024
- 2024Iterative Graph Neural Network Enhancement via Frequent Subgraph Mining of Explanations12 Mar 2024
- 2024Dynamic Graph Information Bottleneck9 Feb 2024
- 2024GPS: Graph Contrastive Learning via Multi-scale Augmented Views from Adversarial Pooling29 Jan 2024
- 2024PhoGAD: Graph-based Anomaly Behavior Detection with Persistent Homology Optimization19 Jan 2024
- 2023Poincar'e Differential Privacy for Hierarchy-Aware Graph Embedding19 Dec 2023
- 2023Reinforcement Neighborhood Selection for Unsupervised Graph Anomaly Detection9 Dec 2023
- 2023Environment-Aware Dynamic Graph Learning for Out-of-Distribution Generalization18 Nov 2023
- 2023Advancing Drug Discovery with Enhanced Chemical Understanding via Asymmetric Contrastive Multimodal Learning11 Nov 2023
- 2023MAG-GNN: Reinforcement Learning Boosted Graph Neural Network29 Oct 2023
- 2023A Causal Disentangled Multi-Granularity Graph Classification Method25 Oct 2023
- 2023Does Graph Distillation See Like Vision Dataset Counterpart?13 Oct 2023
- 2023Thought Propagation: An Analogical Approach to Complex Reasoning with Large Language Models6 Oct 2023
- 20233D-Mol: A Novel Contrastive Learning Framework for Molecular Property Prediction with 3D Information28 Sep 2023
- 2023Contrastive Graph Pooling for Explainable Classification of Brain Networks7 Jul 2023
- 2023On Exploring Node-feature and Graph-structure Diversities for Node Drop Graph Pooling22 Jun 2023
- 2023From Relational Pooling to Subgraph GNNs: A Universal Framework for More Expressive Graph Neural Networks8 May 2023
- 2023Hyperbolic Geometric Graph Representation Learning for Hierarchy-imbalance Node Classification11 Apr 2023
- 2023MPool: Motif-Based Graph Pooling7 Mar 2023
- 2023Invariant Layers for Graphs with Nodes of Different Types27 Feb 2023
- 2023Unbiased and Efficient Self-Supervised Incremental Contrastive Learning28 Jan 2023
- 2023State of the Art and Potentialities of Graph-level Learning14 Jan 2023
- 2022Self-organization Preserved Graph Structure Learning with Principle of Relevant Information30 Dec 2022
- 2022Data Augmentation on Graphs: A Technical Survey20 Dec 2022
- 2022Position-Aware Subgraph Neural Networks with Data-Efficient Learning1 Nov 2022
- 2022Heterogeneous Information Crossing on Graphs for Session-based Recommender Systems24 Oct 2022
- 2022SHINE: SubHypergraph Inductive Neural nEtwork13 Oct 2022
- 2022Heterogeneous Graph Neural Network for Privacy-Preserving Recommendation2 Oct 2022
- 2022A Class-Aware Representation Refinement Framework for Graph Classification2 Sep 2022
50 newest of 75 All 75 (JSON)
- 2021Graph Self-Supervised Learning: A Surveycited by 289
- 2021A Comprehensive Survey on Graph Anomaly Detection with Deep Learningcited by 230
- 2021Self-supervised Learning on Graphs: Contrastive, Generative,or Predictivecited by 136
- 2021Augmentation-Free Self-Supervised Learning on Graphscited by 94
- 2021Graph Structure Learning with Variational Information Bottleneckcited by 81
- 2023Does Graph Distillation See Like Vision Dataset Counterpart?cited by 45
- 2021Reinforced Neighborhood Selection Guided Multi-Relational Graph Neural Networkscited by 38
- 2024A Comprehensive Survey on Data Augmentationcited by 38
- 2021Prototypical Graph Contrastive Learningcited by 37
- 2022MTTrans: Cross-Domain Object Detection with Mean-Teacher Transformercited by 35
- 2022Position-aware Structure Learning for Graph Topology-imbalance by Relieving Under-reaching and Over-squashingcited by 31
- 2022Subgraph Neighboring Relations Infomax for Inductive Link Prediction on Knowledge Graphscited by 26
12 most cited of 71 All 71 (JSON)
- 2026Global to Local: Topology-Preserving Adaptive Graph Pooling via Granular-Ball4 Sep 2026
- 2025Learning and Editing Universal Graph Prompt Tuning via Reinforcement Learning9 Dec 2025
- 2025Graph Data Augmentation with Contrastive Learning on Covariate Distribution Shift30 Nov 2025
- 2025M-GLC: Motif-Driven Global-Local Context Graphs for Few-shot Molecular Property Prediction24 Oct 2025
- 2025Graph Prompting for Graph Learning Models: Recent Advances and Future Directions10 Jun 2025
- 2025Soft causal learning for generalized molecule property prediction: An environment perspective7 May 2025
- 2025A Generative Graph Contrastive Learning Model with Global Signal25 Apr 2025
- 2025Balancing Efficiency and Expressiveness: Subgraph GNNs with Walk-Based Centrality6 Jan 2025
- 2024Towards Fair Graph Representation Learning in Social Networks15 Oct 2024
- 2024RELIEF: Reinforcement Learning Empowered Graph Feature Prompt Tuning6 Aug 2024
- 2024Graph Structure Prompt Learning: A Novel Methodology to Improve Performance of Graph Neural Networks16 Jul 2024
- 2024Graph in Graph Neural Network30 Jun 2024
12 newest of 71 All 71 (JSON)