mlsanityData to 7 Oct 2026

Explainability in Graph Neural Networks: A Taxonomic Survey

arXiv 2012.15445 ↗First posted 31 Dec 2020cs.LG cs.AIcited by 383

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Abstract (arXiv)

Deep learning methods are achieving ever-increasing performance on many artificial intelligence tasks. A major limitation of deep models is that they are not amenable to interpretability. This limitation can be circumvented by developing post hoc techniques to explain the predictions, giving rise to the area of explainability. Recently, explainability of deep models on images and texts has achieved significant progress. In the area of graph data, graph neural networks (GNNs) and their explainability are experiencing rapid developments. However, there is neither a unified treatment of GNN explainability methods, nor a standard benchmark and testbed for evaluations. In this survey, we provide a unified and taxonomic view of current GNN explainability methods. Our unified and taxonomic treatments of this subject shed lights on the commonalities and differences of existing methods and set the stage for further methodological developments. To facilitate evaluations, we generate a set of benchmark graph datasets specifically for GNN explainability. We summarize current datasets and metrics for evaluating GNN explainability. Altogether, this work provides a unified methodological treatment of GNN explainability and a standardized testbed for evaluations.

Key facts. Cited by 383 papers in the map (data through 7 Oct 2026). First posted on arXiv 31 Dec 2020.

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Citing papers per year: 2021: 31; 2022: 67; 2023: 87; 2024: 94; 2025: 60; 2026: 44.

383 papers.

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  1. 2021On Explainability of Graph Neural Networks via Subgraph Explorationscited by 280
  2. 2022Discovering Invariant Rationales for Graph Neural Networkscited by 186
  3. 2021Self-Supervised Learning of Graph Neural Networks: A Unified Reviewcited by 184
  4. 2022Interpretable and Generalizable Graph Learning via Stochastic Attention Mechanismcited by 171
  5. 2022Learning Causally Invariant Representations for Out-of-Distribution Generalization on Graphscited by 144
  6. 2022GOOD: A Graph Out-of-Distribution Benchmarkcited by 140
  7. 2021Benchmarking and Survey of Explanation Methods for Black Box Modelscited by 136
  8. 2021Explainable AI (XAI): A Systematic Meta-Survey of Current Challenges and Future Opportunitiescited by 125
  9. 2021CF-GNNExplainer: Counterfactual Explanations for Graph Neural Networkscited by 118
  10. 2022A Comprehensive Survey on Trustworthy Graph Neural Networks: Privacy, Robustness, Fairness, and Explainabilitycited by 118
  11. 2022A Survey of Knowledge Graph Reasoning on Graph Types: Static, Dynamic, and Multimodalcited by 106
  12. 2022Out-Of-Distribution Generalization on Graphs: A Surveycited by 97
38 more
  1. 2021ProtGNN: Towards Self-Explaining Graph Neural Networkscited by 96
  2. 2021Trustworthy AI: A Computational Perspectivecited by 93
  3. 2021Graph Neural Networks in Network Neurosciencecited by 91
  4. 2022Trustworthy Graph Neural Networks: Aspects, Methods and Trendscited by 88
  5. 2022Evaluating Explainability for Graph Neural Networkscited by 85
  6. 2023Generative Diffusion Models on Graphs: Methods and Applicationscited by 79
  7. 2022Learning and Evaluating Graph Neural Network Explanations based on Counterfactual and Factual Reasoningcited by 78
  8. 2021DIG: A Turnkey Library for Diving into Graph Deep Learning Researchcited by 76
  9. 2022Global Explainability of GNNs via Logic Combination of Learned Conceptscited by 64
  10. 2021GraphSVX: Shapley Value Explanations for Graph Neural Networkscited by 63
  11. 2022Interpretable Graph Neural Networks for Connectome-Based Brain Disorder Analysiscited by 58
  12. 2022GraphFramEx: Towards Systematic Evaluation of Explainability Methods for Graph Neural Networkscited by 57
  13. 2022Federated Graph Neural Networks: Overview, Techniques and Challengescited by 52
  14. 2022Graph Pooling for Graph Neural Networks: Progress, Challenges, and Opportunitiescited by 52
  15. 2022CLEAR: Generative Counterfactual Explanations on Graphscited by 48
  16. 2024Usable XAI: 10 Strategies Towards Exploiting Explainability in the LLM Eracited by 45
  17. 2022GStarX: Explaining Graph Neural Networks with Structure-Aware Cooperative Gamescited by 42
  18. 2023Does Invariant Graph Learning via Environment Augmentation Learn Invariance?cited by 42
  19. 2023Towards Self-Interpretable Graph-Level Anomaly Detectioncited by 41
  20. 2021Sampling methods for efficient training of graph convolutional networks: A surveycited by 40
  21. 2021Automated Machine Learning on Graphs: A Surveycited by 38
  22. 2021Probing GNN Explainers: A Rigorous Theoretical and Empirical Analysis of GNN Explanation Methodscited by 36
  23. 2021Zorro: Valid, Sparse, and Stable Explanations in Graph Neural Networkscited by 34
  24. 2022GNNInterpreter: A Probabilistic Generative Model-Level Explanation for Graph Neural Networkscited by 34
  25. 2022Explaining the Explainers in Graph Neural Networks: a Comparative Studycited by 34
  26. 2024A Review of Graph Neural Networks in Epidemic Modelingcited by 31
  27. 2022A Survey on Graph Counterfactual Explanations: Definitions, Methods, Evaluation, and Research Challengescited by 30
  28. 2022Parallel and Distributed Graph Neural Networks: An In-Depth Concurrency Analysiscited by 29
  29. 2023Joint Learning of Label and Environment Causal Independence for Graph Out-of-Distribution Generalizationcited by 29
  30. 2023A Survey on Explainability of Graph Neural Networkscited by 28
  31. 2022Graph Neural Networks in IoT: A Surveycited by 27
  32. 2023DAG Matters! GFlowNets Enhanced Explainer For Graph Neural Networkscited by 27
  33. 2022A Survey of Explainable Graph Neural Networks: Taxonomy and Evaluation Metricscited by 26
  34. 2023PaGE-Link: Path-based Graph Neural Network Explanation for Heterogeneous Link Predictioncited by 25
  35. 2023Towards Fair Graph Neural Networks via Graph Counterfactualcited by 23
  36. 2023Over-Squashing in Graph Neural Networks: A Comprehensive surveycited by 23
  37. 2023Interpretable Prototype-based Graph Information Bottleneckcited by 23
  38. 2024Graph Condensation: A Surveycited by 23

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