A New Perspective on the Effects of Spectrum in Graph Neural Networks
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Abstract (arXiv)
Many improvements on GNNs can be deemed as operations on the spectrum of the underlying graph matrix, which motivates us to directly study the characteristics of the spectrum and their effects on GNN performance. By generalizing most existing GNN architectures, we show that the correlation issue caused by the unsmooth spectrum becomes the obstacle to leveraging more powerful graph filters as well as developing deep architectures, which therefore restricts GNNs' performance. Inspired by this, we propose the correlation-free architecture which naturally removes the correlation issue among different channels, making it possible to utilize more sophisticated filters within each channel. The final correlation-free architecture with more powerful filters consistently boosts the performance of learning graph representations. Code is available at https://github.com/qslim/gnn-spectrum.
Key facts. Cited by 24 papers in the map (data through 7 Oct 2026). Builds on 44 of its 59 references that are in the map. First posted on arXiv 14 Dec 2021.
Builds on
44 of 59 references.
References · 44
- 2016Semi-Supervised Classification with Graph Convolutional Networkscited by 11,282
- 2017Graph Attention Networkscited by 8,854
- 2017Inductive Representation Learning on Large Graphscited by 6,284
- 2018How Powerful are Graph Neural Networks?cited by 4,355
- 2017Neural Message Passing for Quantum Chemistrycited by 3,460
- 2020Open Graph Benchmark: Datasets for Machine Learning on Graphscited by 2,148
- 2016Convolutional Neural Networks on Graphs with Fast Localized Spectral Filteringcited by 2,085
- 2019Simplifying Graph Convolutional Networkscited by 1,470
- 2017Deep Setscited by 1,394
- 2018Deeper Insights into Graph Convolutional Networks for Semi-Supervised Learningcited by 1,099
- 2018Predict then Propagate: Graph Neural Networks meet Personalized PageRankcited by 987
- 2018Weisfeiler and Leman Go Neural: Higher-order Graph Neural Networkscited by 878
32 more
- 2018Representation Learning on Graphs with Jumping Knowledge Networkscited by 875
- 2020Simple and Deep Graph Convolutional Networkscited by 857
- 2018Hierarchical Graph Representation Learning with Differentiable Poolingcited by 786
- 2019DropEdge: Towards Deep Graph Convolutional Networks on Node Classificationcited by 679
- 2020Benchmarking Graph Neural Networkscited by 672
- 2020Adaptive Universal Generalized PageRank Graph Neural Networkcited by 592
- 2020Principal Neighbourhood Aggregation for Graph Netscited by 477
- 2021Rethinking Graph Transformers with Spectral Attentioncited by 468
- 2019Diffusion Improves Graph Learningcited by 414
- 2021Beyond Low-frequency Information in Graph Convolutional Networkscited by 361
- 2017Residual Gated Graph ConvNetscited by 341
- 2021Do Transformers Really Perform Bad for Graph Representation?cited by 318
- 2016Learning Convolutional Neural Networks for Graphscited by 314
- 2020Improving Graph Neural Network Expressivity via Subgraph Isomorphism Countingcited by 312
- 2017Dynamic Edge-Conditioned Filters in Convolutional Neural Networks on Graphscited by 307
- 2019PairNorm: Tackling Oversmoothing in GNNscited by 297
- 2020Towards Deeper Graph Neural Networkscited by 296
- 2015Diffusion-Convolutional Neural Networkscited by 268
- 2019Revisiting Graph Neural Networks: All We Have is Low-Pass Filterscited by 260
- 2020DeeperGCN: All You Need to Train Deeper GCNscited by 249
- 2017CayleyNets: Graph Convolutional Neural Networks with Complex Rational Spectral Filterscited by 203
- 2021BernNet: Learning Arbitrary Graph Spectral Filters via Bernstein Approximationcited by 195
- 2020Directional Graph Networkscited by 132
- 2021Interpreting and Unifying Graph Neural Networks with An Optimization Frameworkcited by 131
- 2020GraphNorm: A Principled Approach to Accelerating Graph Neural Network Trainingcited by 116
- 2018Janossy Pooling: Learning Deep Permutation-Invariant Functions for Variable-Size Inputscited by 96
- 2014Propagation Kernelscited by 88
- 2020Tackling Over-Smoothing for General Graph Convolutional Networkscited by 66
- 2018Anonymous Walk Embeddingscited by 46
- 2020Graph convolutions that can finally model local structurecited by 31
- 2021LiteGEM: Lite Geometry Enhanced Molecular Representation Learning for Quantum Property Predictioncited by 6
- 2021Message Passing in Graph Convolution Networks via Adaptive Filter Bankscited by 4
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Citing papers per year: 2022: 2; 2023: 8; 2024: 7; 2025: 6; 2026: 1.
24 papers.
Sort:
- 2023Specformer: Spectral Graph Neural Networks Meet Transformerscited by 102
- 2023Energy Transformercited by 69
- 2023A Survey on Spectral Graph Neural Networkscited by 26
- 2024AdaFGL: A New Paradigm for Federated Node Classification with Topology Heterogeneitycited by 25
- 2024Partitioning Message Passing for Graph Fraud Detectioncited by 21
- 2025No Metric to Rule Them All: Toward Principled Evaluations of Graph-Learning Datasetscited by 16
- 2022Learnable Spectral Wavelets on Dynamic Graphs to Capture Global Interactionscited by 10
- 2024Graph Fourier Neural Kernels (G-FuNK): Learning Solutions of Nonlinear Diffusive Parametric PDEs on Multiple Domainscited by 5
- 2023Multiresolution Graph Transformers and Wavelet Positional Encoding for Learning Hierarchical Structurescited by 4
- 2023Towards Better Graph Representation Learning with Parameterized Decomposition & Filteringcited by 4
- 2022Deep representation learning: Fundamentals, Perspectives, Applications, and Open Challengescited by 3
- 2023Beyond Graph Convolutional Network: An Interpretable Regularizer-centered Optimization Frameworkcited by 3
12 more
- 2024Spectral GNN via Two-dimensional (2-D) Graph Convolutioncited by 3
- 2024Graph Neural Networks Are More Than Filters: Revisiting and Benchmarking from A Spectral Perspectivecited by 3
- 2023Perfect Alignment May be Poisonous to Graph Contrastive Learningcited by 2
- 2024Through the Dual-Prism: A Spectral Perspective on Graph Data Augmentation for Graph Classificationcited by 2
- 2023Degree-based stratification of nodes in Graph Neural Networkscited by 1
- 2025Federated Prototype Graph Learningcited by 1
- 2025Towards Unbiased Federated Graph Learning: Label and Topology Perspectivescited by 1
- 2025Towards Unsupervised Open-Set Graph Domain Adaptation via Dual Reprogrammingcited by 1
- 2024Technical Report: The Graph Spectral Token -- Enhancing Graph Transformers with Spectral Informationcited by 0
- 2025Toward Data-centric Directed Graph Learning: An Entropy-driven Approachcited by 0
- 2025Learning from Heterophilic Graphs: A Spectral Theory Perspective on the Impact of Self-Loops and Parallel Edgescited by 0
- 2026Controlled Dynamics Attractor Transformercited by 0
- 2026Controlled Dynamics Attractor Transformer13 Jun 2026
- 2025Towards Unsupervised Open-Set Graph Domain Adaptation via Dual Reprogramming21 Oct 2025
- 2025Learning from Heterophilic Graphs: A Spectral Theory Perspective on the Impact of Self-Loops and Parallel Edges16 Sep 2025
- 2025Toward Data-centric Directed Graph Learning: An Entropy-driven Approach2 May 2025
- 2025Towards Unbiased Federated Graph Learning: Label and Topology Perspectives14 Apr 2025
- 2025Federated Prototype Graph Learning13 Apr 2025
- 2025No Metric to Rule Them All: Toward Principled Evaluations of Graph-Learning Datasets4 Feb 2025
- 2024Graph Neural Networks Are More Than Filters: Revisiting and Benchmarking from A Spectral Perspective10 Dec 2024
- 2024Partitioning Message Passing for Graph Fraud Detection16 Nov 2024
- 2024Graph Fourier Neural Kernels (G-FuNK): Learning Solutions of Nonlinear Diffusive Parametric PDEs on Multiple Domains6 Oct 2024
- 2024Technical Report: The Graph Spectral Token -- Enhancing Graph Transformers with Spectral Information8 Apr 2024
- 2024Spectral GNN via Two-dimensional (2-D) Graph Convolution6 Apr 2024
12 more
- 2024AdaFGL: A New Paradigm for Federated Node Classification with Topology Heterogeneity22 Jan 2024
- 2024Through the Dual-Prism: A Spectral Perspective on Graph Data Augmentation for Graph Classification18 Jan 2024
- 2023Degree-based stratification of nodes in Graph Neural Networks16 Dec 2023
- 2023Perfect Alignment May be Poisonous to Graph Contrastive Learning6 Oct 2023
- 2023Towards Better Graph Representation Learning with Parameterized Decomposition & Filtering10 May 2023
- 2023Specformer: Spectral Graph Neural Networks Meet Transformers2 Mar 2023
- 2023Multiresolution Graph Transformers and Wavelet Positional Encoding for Learning Hierarchical Structures17 Feb 2023
- 2023Energy Transformer14 Feb 2023
- 2023A Survey on Spectral Graph Neural Networks11 Feb 2023
- 2023Beyond Graph Convolutional Network: An Interpretable Regularizer-centered Optimization Framework11 Jan 2023
- 2022Deep representation learning: Fundamentals, Perspectives, Applications, and Open Challenges27 Nov 2022
- 2022Learnable Spectral Wavelets on Dynamic Graphs to Capture Global Interactions22 Nov 2022
- 2023Specformer: Spectral Graph Neural Networks Meet Transformerscited by 102
- 2023Energy Transformercited by 69
- 2023A Survey on Spectral Graph Neural Networkscited by 26
- 2024AdaFGL: A New Paradigm for Federated Node Classification with Topology Heterogeneitycited by 25
- 2024Partitioning Message Passing for Graph Fraud Detectioncited by 21
- 2025No Metric to Rule Them All: Toward Principled Evaluations of Graph-Learning Datasetscited by 16
- 2022Learnable Spectral Wavelets on Dynamic Graphs to Capture Global Interactionscited by 10
- 2024Graph Fourier Neural Kernels (G-FuNK): Learning Solutions of Nonlinear Diffusive Parametric PDEs on Multiple Domainscited by 5
- 2023Multiresolution Graph Transformers and Wavelet Positional Encoding for Learning Hierarchical Structurescited by 4
- 2023Towards Better Graph Representation Learning with Parameterized Decomposition & Filteringcited by 4
- 2022Deep representation learning: Fundamentals, Perspectives, Applications, and Open Challengescited by 3
- 2023Beyond Graph Convolutional Network: An Interpretable Regularizer-centered Optimization Frameworkcited by 3
12 most cited of 24 All 24 (JSON)
- 2026Controlled Dynamics Attractor Transformer13 Jun 2026
- 2025Towards Unsupervised Open-Set Graph Domain Adaptation via Dual Reprogramming21 Oct 2025
- 2025Learning from Heterophilic Graphs: A Spectral Theory Perspective on the Impact of Self-Loops and Parallel Edges16 Sep 2025
- 2025Toward Data-centric Directed Graph Learning: An Entropy-driven Approach2 May 2025
- 2025Towards Unbiased Federated Graph Learning: Label and Topology Perspectives14 Apr 2025
- 2025Federated Prototype Graph Learning13 Apr 2025
- 2025No Metric to Rule Them All: Toward Principled Evaluations of Graph-Learning Datasets4 Feb 2025
- 2024Graph Neural Networks Are More Than Filters: Revisiting and Benchmarking from A Spectral Perspective10 Dec 2024
- 2024Partitioning Message Passing for Graph Fraud Detection16 Nov 2024
- 2024Graph Fourier Neural Kernels (G-FuNK): Learning Solutions of Nonlinear Diffusive Parametric PDEs on Multiple Domains6 Oct 2024
- 2024Technical Report: The Graph Spectral Token -- Enhancing Graph Transformers with Spectral Information8 Apr 2024
- 2024Spectral GNN via Two-dimensional (2-D) Graph Convolution6 Apr 2024
12 newest of 24 All 24 (JSON)