A Benchmarking Study of Embedding-based Entity Alignment for Knowledge Graphs
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Abstract (arXiv)
Entity alignment seeks to find entities in different knowledge graphs (KGs) that refer to the same real-world object. Recent advancement in KG embedding impels the advent of embedding-based entity alignment, which encodes entities in a continuous embedding space and measures entity similarities based on the learned embeddings. In this paper, we conduct a comprehensive experimental study of this emerging field. We survey 23 recent embedding-based entity alignment approaches and categorize them based on their techniques and characteristics. We also propose a new KG sampling algorithm, with which we generate a set of dedicated benchmark datasets with various heterogeneity and distributions for a realistic evaluation. We develop an open-source library including 12 representative embedding-based entity alignment approaches, and extensively evaluate these approaches, to understand their strengths and limitations. Additionally, for several directions that have not been explored in current approaches, we perform exploratory experiments and report our preliminary findings for future studies. The benchmark datasets, open-source library and experimental results are all accessible online and will be duly maintained.
Key facts. Cited by 119 papers in the map (data through 7 Oct 2026). First posted on arXiv 10 Mar 2020.
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Citing papers per year: 2021: 12; 2022: 29; 2023: 35; 2024: 26; 2025: 7; 2026: 10.
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- 2022A Survey of Knowledge Graph Reasoning on Graph Types: Static, Dynamic, and Multimodalcited by 106
- 2023Large Language Models and Knowledge Graphs: Opportunities and Challengescited by 71
- 2022Multi-modal Contrastive Representation Learning for Entity Alignmentcited by 37
- 2021A Benchmark and Comprehensive Survey on Knowledge Graph Entity Alignment via Representation Learningcited by 31
- 2024A Prompt-Based Knowledge Graph Foundation Model for Universal In-Context Reasoningcited by 25
- 2022Multilingual Knowledge Graph Completion with Self-Supervised Adaptive Graph Alignmentcited by 24
- 2024Entity Alignment with Noisy Annotations from Large Language Modelscited by 22
- 2023Double Equivariance for Inductive Link Prediction for Both New Nodes and New Relation Typescited by 21
- 2021Knowing the No-match: Entity Alignment with Dangling Casescited by 20
- 2022ClusterEA: Scalable Entity Alignment with Stochastic Training and Normalized Mini-batch Similaritiescited by 20
- 2023Rethinking Uncertainly Missing and Ambiguous Visual Modality in Multi-Modal Entity Alignmentcited by 20
- 2021OntoEA: Ontology-guided Entity Alignment via Joint Knowledge Graph Embeddingcited by 19
38 more
- 2023Unsupervised Entity Alignment for Temporal Knowledge Graphscited by 19
- 2023Vision, Deduction and Alignment: An Empirical Study on Multi-modal Knowledge Graph Alignmentcited by 19
- 2021Unsupervised Knowledge Graph Alignment by Probabilistic Reasoning and Semantic Embeddingcited by 18
- 2022LightEA: A Scalable, Robust, and Interpretable Entity Alignment Framework via Three-view Label Propagationcited by 18
- 2022Time-aware Graph Neural Networks for Entity Alignment between Temporal Knowledge Graphscited by 16
- 2023A Fused Gromov-Wasserstein Framework for Unsupervised Knowledge Graph Entity Alignmentcited by 16
- 2023Robust Attributed Graph Alignment via Joint Structure Learning and Optimal Transportcited by 15
- 2024Unlocking the Power of Large Language Models for Entity Alignmentcited by 15
- 2022A Unified Framework for Rank-based Evaluation Metrics for Link Prediction in Knowledge Graphscited by 14
- 2023UKnow: A Unified Knowledge Protocol with Multimodal Knowledge Graph Datasets for Reasoning and Vision-Language Pre-Trainingcited by 14
- 2021Prix-LM: Pretraining for Multilingual Knowledge Base Constructioncited by 12
- 2023Construction of Knowledge Graphs: State and Challengescited by 12
- 2021ActiveEA: Active Learning for Neural Entity Alignmentcited by 11
- 2023HiPrompt: Few-Shot Biomedical Knowledge Fusion via Hierarchy-Oriented Promptingcited by 11
- 2025PLANETALIGN: A Comprehensive Python Library for Benchmarking Network Alignmentcited by 10
- 2022Large-scale Entity Alignment via Knowledge Graph Merging, Partitioning and Embeddingcited by 9
- 2022Informed Multi-context Entity Alignmentcited by 8
- 2022Facing Changes: Continual Entity Alignment for Growing Knowledge Graphscited by 8
- 2023Toward Practical Entity Alignment Method Design: Insights from New Highly Heterogeneous Knowledge Graph Datasetscited by 8
- 2024Neuro-Symbolic Entity Alignment via Variational Inferencecited by 8
- 2022Interactive Contrastive Learning for Self-supervised Entity Alignmentcited by 7
- 2022Ensemble Semi-supervised Entity Alignment via Cycle-teachingcited by 7
- 2022Entity Alignment with Reliable Path Reasoning and Relation-Aware Heterogeneous Graph Transformercited by 7
- 2022A Simple Temporal Information Matching Mechanism for Entity Alignment Between Temporal Knowledge Graphscited by 7
- 2022mOKB6: A Multilingual Open Knowledge Base Completion Benchmarkcited by 7
- 2023Revisit and Outstrip Entity Alignment: A Perspective of Generative Modelscited by 7
- 2023AutoAlign: Fully Automatic and Effective Knowledge Graph Alignment enabled by Large Language Modelscited by 7
- 2024Noise-powered Multi-modal Knowledge Graph Representation Frameworkcited by 7
- 2023Deep Active Alignment of Knowledge Graph Entities and Schematacited by 6
- 2023From Alignment to Entailment: A Unified Textual Entailment Framework for Entity Alignmentcited by 6
- 2024Pseudo-Label Calibration Semi-supervised Multi-Modal Entity Alignmentcited by 6
- 2021EAGER: Embedding-Assisted Entity Resolution for Knowledge Graphscited by 5
- 2022Knowledge Graph Embedding Methods for Entity Alignment: An Experimental Reviewcited by 5
- 2023SEA: A Scalable Entity Alignment Systemcited by 5
- 2023Joint Pre-training and Local Re-training: Transferable Representation Learning on Multi-source Knowledge Graphscited by 5
- 2023Generating Explanations to Understand and Repair Embedding-based Entity Alignmentcited by 5
- 2024ASGEA: Exploiting Logic Rules from Align-Subgraphs for Entity Alignmentcited by 5
- 2024Uncertainty Management in the Construction of Knowledge Graphs: a Surveycited by 5
50 most cited of 119 All 119 (JSON)
- 2026Reliability of LLM Judges for Evaluating Entity Alignment7 Oct 2026
- 2026IRIS: Reusable Identity Representations from Frozen LLMs for Entity Alignment28 Jul 2026
- 2026Predicate Importance Estimation and Decoupled Rationale-Score Distillation for Entity Alignment22 Jun 2026
- 2026When Metrics Disagree: A Meta-Analysis of Knowledge-Graph-Completion Model Benchmarking9 Jun 2026
- 2026Harnessing Structural Context for Entity Alignment Foundation Models4 Jun 2026
- 2026Link Prediction or Perdition: the Seeds of Instability in Knowledge Graph Embeddings2 Jun 2026
- 2026HELEA: Hard-Negative Benchmark and LLM-based Reranking for Robust Entity Alignment27 May 2026
- 2026Debate to Align: Reliable Entity Alignment through Two-Stage Multi-Agent Debate15 Apr 2026
- 2026Breaking the Reasoning Horizon in Entity Alignment Foundation Models29 Jan 2026
- 2026KG-ViP: Bridging Knowledge Grounding and Visual Perception in Multi-modal LLMs for Visual Question Answering14 Jan 2026
- 2025FLORA: Unsupervised Knowledge Graph Alignment by Fuzzy Logic23 Oct 2025
- 2025KG-EDAS: A Meta-Metric Framework for Evaluating Knowledge Graph Completion Models21 Aug 2025
38 more
- 2025Full Triple Matcher: Integrating all triple elements between heterogeneous Knowledge Graphs20 Jul 2025
- 2025Mask6D: Masked Pose Priors For 6D Object Pose Estimation9 Jul 2025
- 2025PLANETALIGN: A Comprehensive Python Library for Benchmarking Network Alignment27 May 2025
- 2025Deal: Distributed End-to-End GNN Inference for All Nodes4 Mar 2025
- 2025Unsupervised Entity Alignment Based on Personalized Discriminative Rooted Tree14 Feb 2025
- 2024Extending TWIG: Zero-Shot Predictive Hyperparameter Selection for KGEs based on Graph Structure19 Dec 2024
- 2024Unifying Dual-Space Embedding for Entity Alignment via Contrastive Learning6 Dec 2024
- 2024Resilience in Knowledge Graph Embeddings28 Oct 2024
- 2024Gene-Metabolite Association Prediction with Interactive Knowledge Transfer Enhanced Graph for Metabolite Production24 Oct 2024
- 2024Attr-Int: A Simple and Effective Entity Alignment Framework for Heterogeneous Knowledge Graphs17 Oct 2024
- 2024A Prompt-Based Knowledge Graph Foundation Model for Universal In-Context Reasoning16 Oct 2024
- 2024Towards General Deepfake Detection with Dynamic Curriculum15 Oct 2024
- 2024Neuro-Symbolic Entity Alignment via Variational Inference5 Oct 2024
- 2024LLM+KG@VLDB'24 Workshop Summary2 Oct 2024
- 2024Strategic Arms with Side Communication Prevail Over Low-Regret MAB Algorithms30 Aug 2024
- 2024DERA: Dense Entity Retrieval for Entity Alignment in Knowledge Graphs2 Aug 2024
- 2024Aligning Multiple Knowledge Graphs in a Single Pass1 Aug 2024
- 2024Progressively Modality Freezing for Multi-Modal Entity Alignment23 Jul 2024
- 2024Uncertainty Management in the Construction of Knowledge Graphs: a Survey27 May 2024
- 2024Entity Alignment with Noisy Annotations from Large Language Models27 May 2024
- 2024NALA: an Effective and Interpretable Entity Alignment Method18 Apr 2024
- 2024T-Pixel2Mesh: Combining Global and Local Transformer for 3D Mesh Generation from a Single Image20 Mar 2024
- 2024Lambda: Learning Matchable Prior For Entity Alignment with Unlabeled Dangling Cases16 Mar 2024
- 2024Noise-powered Multi-modal Knowledge Graph Representation Framework11 Mar 2024
- 2024Pseudo-Label Calibration Semi-supervised Multi-Modal Entity Alignment2 Mar 2024
- 2024Unlocking the Power of Large Language Models for Entity Alignment23 Feb 2024
- 2024ASGEA: Exploiting Logic Rules from Align-Subgraphs for Entity Alignment16 Feb 2024
- 2024Understanding and Guiding Weakly Supervised Entity Alignment with Potential Isomorphism Propagation5 Feb 2024
- 2024Gradient Flow of Energy: A General and Efficient Approach for Entity Alignment Decoding23 Jan 2024
- 2024TEN-GUARD: Tensor Decomposition for Backdoor Attack Detection in Deep Neural Networks6 Jan 2024
- 2024TRLS: A Time Series Representation Learning Framework via Spectrogram for Medical Signal Processing6 Jan 2024
- 2023DarkShot: Lighting Dark Images with Low-Compute and High-Quality28 Dec 2023
- 2023Do Similar Entities have Similar Embeddings?16 Dec 2023
- 2023Self-supervised Adaptive Pre-training of Multilingual Speech Models for Language and Dialect Identification12 Dec 2023
- 2023Generating Explanations to Understand and Repair Embedding-based Entity Alignment8 Dec 2023
- 2023GMTR: Graph Matching Transformers14 Nov 2023
- 2023Knowledge Graphs are not Created Equal: Exploring the Properties and Structure of Real KGs10 Nov 2023
- 2023MixTEA: Semi-supervised Entity Alignment with Mixture Teaching8 Nov 2023
50 newest of 119 All 119 (JSON)
- 2022A Survey of Knowledge Graph Reasoning on Graph Types: Static, Dynamic, and Multimodalcited by 106
- 2023Large Language Models and Knowledge Graphs: Opportunities and Challengescited by 71
- 2022Multi-modal Contrastive Representation Learning for Entity Alignmentcited by 37
- 2021A Benchmark and Comprehensive Survey on Knowledge Graph Entity Alignment via Representation Learningcited by 31
- 2024A Prompt-Based Knowledge Graph Foundation Model for Universal In-Context Reasoningcited by 25
- 2022Multilingual Knowledge Graph Completion with Self-Supervised Adaptive Graph Alignmentcited by 24
- 2024Entity Alignment with Noisy Annotations from Large Language Modelscited by 22
- 2023Double Equivariance for Inductive Link Prediction for Both New Nodes and New Relation Typescited by 21
- 2021Knowing the No-match: Entity Alignment with Dangling Casescited by 20
- 2022ClusterEA: Scalable Entity Alignment with Stochastic Training and Normalized Mini-batch Similaritiescited by 20
- 2023Rethinking Uncertainly Missing and Ambiguous Visual Modality in Multi-Modal Entity Alignmentcited by 20
- 2021OntoEA: Ontology-guided Entity Alignment via Joint Knowledge Graph Embeddingcited by 19
12 most cited of 114 All 114 (JSON)
- 2026Reliability of LLM Judges for Evaluating Entity Alignment7 Oct 2026
- 2026IRIS: Reusable Identity Representations from Frozen LLMs for Entity Alignment28 Jul 2026
- 2026When Metrics Disagree: A Meta-Analysis of Knowledge-Graph-Completion Model Benchmarking9 Jun 2026
- 2026Harnessing Structural Context for Entity Alignment Foundation Models4 Jun 2026
- 2026Link Prediction or Perdition: the Seeds of Instability in Knowledge Graph Embeddings2 Jun 2026
- 2026HELEA: Hard-Negative Benchmark and LLM-based Reranking for Robust Entity Alignment27 May 2026
- 2026Breaking the Reasoning Horizon in Entity Alignment Foundation Models29 Jan 2026
- 2025FLORA: Unsupervised Knowledge Graph Alignment by Fuzzy Logic23 Oct 2025
- 2025KG-EDAS: A Meta-Metric Framework for Evaluating Knowledge Graph Completion Models21 Aug 2025
- 2025Full Triple Matcher: Integrating all triple elements between heterogeneous Knowledge Graphs20 Jul 2025
- 2025Mask6D: Masked Pose Priors For 6D Object Pose Estimation9 Jul 2025
- 2025PLANETALIGN: A Comprehensive Python Library for Benchmarking Network Alignment27 May 2025
12 newest of 114 All 114 (JSON)