UD-Mamba: A pixel-level uncertainty-driven Mamba model for medical image segmentation
On the map: State-space sequence models (S4, Mamba) → Mamba for medical image analysis
Abstract (arXiv)
Recent advancements have highlighted the Mamba framework, a state-space model known for its efficiency in capturing long-range dependencies with linear computational complexity. While Mamba has shown competitive performance in medical image segmentation, it encounters difficulties in modeling local features due to the sporadic nature of traditional location-based scanning methods and the complex, ambiguous boundaries often present in medical images. To overcome these challenges, we propose Uncertainty-Driven Mamba (UD-Mamba), which redefines the pixel-order scanning process by incorporating channel uncertainty into the scanning mechanism. UD-Mamba introduces two key scanning techniques: 1) sequential scanning, which prioritizes regions with high uncertainty by scanning in a row-by-row fashion, and 2) skip scanning, which processes columns vertically, moving from high-to-low or low-to-high uncertainty at fixed intervals. Sequential scanning efficiently clusters high-uncertainty regions, such as boundaries and foreground objects, to improve segmentation precision, while skip scanning enhances the interaction between background and foreground regions, allowing for timely integration of background information to support more accurate foreground inference. Recognizing the advantages of scanning from certain to uncertain areas, we introduce four learnable parameters to balance the importance of features extracted from different scanning methods. Additionally, a cosine consistency loss is employed to mitigate the drawbacks of transitioning between uncertain and certain regions during the scanning process. Our method demonstrates robust segmentation performance, validated across three distinct medical imaging datasets involving pathology, dermatological lesions, and cardiac tasks.
Key facts. Cited by 3 papers in the map (data through 14 Oct 2026). Placed in Mamba for medical image analysis, one of 10 directions in State-space sequence models (S4, Mamba). Builds on 18 of its 67 references that are in the map. First posted on arXiv 4 Feb 2025.
Builds on
18 of 67 references.
Closest ancestors · 8
Same direction, newest first
- 2024SliceMamba with Neural Architecture Search for Medical Image Segmentation11 Jul
- 2024LKM-UNet: Large Kernel Vision Mamba UNet for Medical Image Segmentation12 Mar
- 2024MambaMIL: Enhancing Long Sequence Modeling with Sequence Reordering in Computational Pathology11 Mar
- 2024P-Mamba: Marrying Perona Malik Diffusion with Mamba for Efficient Pediatric Echocardiographic Left Ventricular Segmentation13 Feb
- 2024Mamba-UNet: UNet-Like Pure Visual Mamba for Medical Image Segmentation7 Feb
- 2024VM-UNet: Vision Mamba UNet for Medical Image Segmentation4 Feb
- 2024SegMamba: Long-range Sequential Modeling Mamba For 3D Medical Image Segmentation24 Jan
- 2024U-Mamba: Enhancing Long-range Dependency for Biomedical Image Segmentation9 Jan
Other references · 10
- 2023Mamba: Linear-Time Sequence Modeling with Selective State Spacescited by 4,718
- 2021Efficiently Modeling Long Sequences with Structured State Spacescited by 2,465
- 2018Attention U-Net: Learning Where to Look for the Pancreascited by 1,435
- 2024Transformers are SSMs: Generalized Models and Efficient Algorithms Through Structured State Space Dualitycited by 1,336
- 2024VMamba: Visual State Space Modelcited by 969
- 2019Skin Lesion Analysis Toward Melanoma Detection 2018: A Challenge Hosted by the International Skin Imaging Collaboration (ISIC)cited by 669
- 2024MambaAD: Exploring State Space Models for Multi-class Unsupervised Anomaly Detectioncited by 113
- 2021MISSFormer: An Effective Medical Image Segmentation Transformercited by 103
- 2024Voxel Mamba: Group-Free State Space Models for Point Cloud based 3D Object Detectioncited by 66
- 2024Mamba-R: Vision Mamba ALSO Needs Registerscited by 41
Built on by
Citing papers per year: 2025: 2; 2026: 1.
3 papers.
- 2025A Comprehensive Analysis of Mamba for 3D Volumetric Medical Image Segmentationcited by 4
- 2025RNN as Linear Transformer: A Closer Investigation into Representational Potentials of Visual Mamba Modelscited by 1
- 2026SynerMedGen: Synergizing Medical Multimodal Understanding with Generation via Task Alignmentcited by 0
- 2026SynerMedGen: Synergizing Medical Multimodal Understanding with Generation via Task Alignment9 May 2026
- 2025RNN as Linear Transformer: A Closer Investigation into Representational Potentials of Visual Mamba Models23 Nov 2025
- 2025A Comprehensive Analysis of Mamba for 3D Volumetric Medical Image Segmentation25 Mar 2025
Similar, not cited
Close in wording, no citation either way
- 2024HC-Mamba: Vision MAMBA with Hybrid Convolutional Techniques for Medical Image Segmentation
- 2024UU-Mamba: Uncertainty-aware U-Mamba for Cardiac Image Segmentation
- 2024Attention-Mamba: A Mamba-Enhanced Multi-Scale Parallel Inference Network for Medical Image Segmentation
- 2025Diversity-enhanced Collaborative Mamba for Semi-supervised Medical Image Segmentation
- 2026Patch-MoE Mamba: A Patch-Ordered Mixture-of-Experts State Space Architecture for Medical Image Segmentation
- 2025HybridMamba: A Dual-domain Mamba for 3D Medical Image Segmentation
- 2025MambaCAFU: Hybrid Multi-Scale and Multi-Attention Model with Mamba-Based Fusion for Medical Image Segmentation
- 2025Flatten Wisely: How Patch Order Shapes Mamba-Powered Vision for MRI Segmentation