Centerline Boundary Dice Loss for Vascular Segmentation
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Abstract (arXiv)
Vascular segmentation in medical imaging plays a crucial role in analysing morphological and functional assessments. Traditional methods, like the centerline Dice (clDice) loss, ensure topology preservation but falter in capturing geometric details, especially under translation and deformation. The combination of clDice with traditional Dice loss can lead to diameter imbalance, favoring larger vessels. Addressing these challenges, we introduce the centerline boundary Dice (cbDice) loss function, which harmonizes topological integrity and geometric nuances, ensuring consistent segmentation across various vessel sizes. cbDice enriches the clDice approach by including boundary-aware aspects, thereby improving geometric detail recognition. It matches the performance of the boundary difference over union (B-DoU) loss through a mask-distance-based approach, enhancing traslation sensitivity. Crucially, cbDice incorporates radius information from vascular skeletons, enabling uniform adaptation to vascular diameter changes and maintaining balance in branch growth and fracture impacts. Furthermore, we conducted a theoretical analysis of clDice variants (cl-X-Dice). We validated cbDice's efficacy on three diverse vascular segmentation datasets, encompassing both 2D and 3D, and binary and multi-class segmentation. Particularly, the method integrated with cbDice demonstrated outstanding performance on the MICCAI 2023 TopCoW Challenge dataset. Our code is made publicly available at: https://github.com/PengchengShi1220/cbDice.
Key facts. Cited by 27 papers in the map (data through 7 Oct 2026). Builds on 19 of its 28 references that are in the map. First posted on arXiv 1 Jul 2024.
Builds on
19 of 28 references.
References · 19
- 2022Swin UNETR: Swin Transformers for Semantic Segmentation of Brain Tumors in MRI Imagescited by 823
- 2020clDice -- A Novel Topology-Preserving Loss Function for Tubular Structure Segmentationcited by 286
- 2019Topology-Preserving Deep Image Segmentationcited by 198
- 2022Metrics reloaded: Recommendations for image analysis validationcited by 190
- 2018Boundary loss for highly unbalanced segmentationcited by 187
- 2019A Topological Loss Function for Deep-Learning based Image Segmentation using Persistent Homologycited by 134
- 2021Unified Focal loss: Generalising Dice and cross entropy-based losses to handle class imbalanced medical image segmentationcited by 88
- 2023Dynamic Snake Convolution based on Topological Geometric Constraints for Tubular Structure Segmentationcited by 83
- 2018Combo Loss: Handling Input and Output Imbalance in Multi-Organ Segmentationcited by 76
- 2023Understanding metric-related pitfalls in image analysis validationcited by 57
- 2019Deep Distance Transform for Tubular Structure Segmentation in CT Scanscited by 52
- 2022Topologically faithful image segmentation via induced matching of persistence barcodescited by 48
7 more
- 2023The TopCoW Challenge -- Topology-Aware Circle of Willis Segmentation for CT and MR Angiographycited by 48
- 2019Shape-Aware Organ Segmentation by Predicting Signed Distance Mapscited by 41
- 2023Topology-Aware Uncertainty for Image Segmentationcited by 32
- 2023Efficient automatic segmentation for multi-level pulmonary arteries: The PARSE challengecited by 26
- 2023A skeletonization algorithm for gradient-based optimizationcited by 17
- 2023Boundary Difference Over Union Loss For Medical Image Segmentationcited by 13
- 2023NexToU: Efficient Topology-Aware U-Net for Medical Image Segmentationcited by 9
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Citing papers per year: 2024: 2; 2025: 12; 2026: 13.
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- 2025GLCP: Global-to-Local Connectivity Preservation for Tubular Structure Segmentationcited by 9
- 2025Multi-Class Segmentation of Aortic Branches and Zones in Computed Tomography Angiography: The AortaSeg24 Challengecited by 6
- 2025BrainMRDiff: A Diffusion Model for Anatomically Consistent Brain MRI Synthesiscited by 4
- 2025VesselSDF: Distance Field Priors for Vascular Network Reconstructioncited by 2
- 2024Topology-Aware Exploration of Circle of Willis for CTA and MRA: Segmentation, Detection, and Classificationcited by 1
- 2025COMMA: Coordinate-aware Modulated Mamba Network for 3D Dispersed Vessel Segmentationcited by 1
- 2025TopoMortar: A dataset to evaluate image segmentation methods focused on topology accuracycited by 1
- 2025Disconnect to Connect: A Data Augmentation Method for Improving Topology Accuracy in Image Segmentationcited by 1
- 2025HRVVS: A High-resolution Video Vasculature Segmentation Network via Hierarchical Autoregressive Residual Priorscited by 1
- 2025TopoSculpt: Betti-Steered Topological Sculpting of 3D Fine-grained Tubular Shapescited by 1
- 2026Leveraging Persistence Image to Enhance Robustness and Performance in Curvilinear Structure Segmentationcited by 1
- 2026Robust automatic brain vessel segmentation in 3D CTA scans using dynamic 4D-CTA datacited by 1
15 more
- 2026Towards High-Quality Image Segmentation: Improving Topology Accuracy by Penalizing Neighbor Pixelscited by 1
- 2024Conformable Convolution for Topologically Aware Learning of Complex Anatomical Structurescited by 0
- 2025Shape-aware Sampling Matters in the Modeling of Multi-Class Tubular Structurescited by 0
- 2025ArteryX: A Reliable End-to-End Toolbox for Standardized Intracranial Artery Feature Extraction from 3D TOF-MRAcited by 0
- 2025Anatomy-DT: A Cross-Diffusion Digital Twin for Anatomical Evolutioncited by 0
- 2026IMSAHLO: Integrating Multi-Scale Attention and Hybrid Loss Optimization Framework for Robust Neuronal Brain Cell Segmentationcited by 0
- 2026TubeMLLM: A Foundation Model for Topology Knowledge Exploration in Vessel-like Anatomycited by 0
- 2026Focus on What Matters: Two-Stage ROI-Aware Refinement for Anatomy-Preserving Fetal Ultrasound Reconstructioncited by 0
- 2026MARVEL: Universal Murray's Law-informed Vessel Tree Segmentation and Topology Estimationcited by 0
- 2026VesselSim: learning 3D blood vessel segmentation without expert annotationscited by 0
- 2026vesselFM-CT: Segmenting All Blood Vessels in CT Images for System-Level Cardiovascular Analysiscited by 0
- 2026CSWinUNETR: Segmentation of Thin Anatomical Structures in Medical Imagescited by 0
- 2026MorVess: Morphology-Aware Pulmonary Vessel Segmentation Networkcited by 0
- 2026Widest-Path Reachability Fields for Connectivity-Preserving Slender Structure Segmentationcited by 0
- 2026Beyond Volume Overlap: Surface Matching for Topology-Aware Coronary Artery Segmentationcited by 0
- 2026Beyond Volume Overlap: Surface Matching for Topology-Aware Coronary Artery Segmentation22 Sep 2026
- 2026Widest-Path Reachability Fields for Connectivity-Preserving Slender Structure Segmentation8 Jul 2026
- 2026MorVess: Morphology-Aware Pulmonary Vessel Segmentation Network23 Jun 2026
- 2026CSWinUNETR: Segmentation of Thin Anatomical Structures in Medical Images18 Jun 2026
- 2026vesselFM-CT: Segmenting All Blood Vessels in CT Images for System-Level Cardiovascular Analysis8 Jun 2026
- 2026VesselSim: learning 3D blood vessel segmentation without expert annotations25 May 2026
- 2026MARVEL: Universal Murray's Law-informed Vessel Tree Segmentation and Topology Estimation25 May 2026
- 2026Focus on What Matters: Two-Stage ROI-Aware Refinement for Anatomy-Preserving Fetal Ultrasound Reconstruction26 Apr 2026
- 2026Towards High-Quality Image Segmentation: Improving Topology Accuracy by Penalizing Neighbor Pixels19 Mar 2026
- 2026TubeMLLM: A Foundation Model for Topology Knowledge Exploration in Vessel-like Anatomy10 Mar 2026
- 2026Robust automatic brain vessel segmentation in 3D CTA scans using dynamic 4D-CTA data30 Jan 2026
- 2026Leveraging Persistence Image to Enhance Robustness and Performance in Curvilinear Structure Segmentation25 Jan 2026
15 more
- 2026IMSAHLO: Integrating Multi-Scale Attention and Hybrid Loss Optimization Framework for Robust Neuronal Brain Cell Segmentation14 Jan 2026
- 2025Anatomy-DT: A Cross-Diffusion Digital Twin for Anatomical Evolution29 Sep 2025
- 2025TopoSculpt: Betti-Steered Topological Sculpting of 3D Fine-grained Tubular Shapes4 Sep 2025
- 2025HRVVS: A High-resolution Video Vasculature Segmentation Network via Hierarchical Autoregressive Residual Priors30 Jul 2025
- 2025GLCP: Global-to-Local Connectivity Preservation for Tubular Structure Segmentation28 Jul 2025
- 2025ArteryX: A Reliable End-to-End Toolbox for Standardized Intracranial Artery Feature Extraction from 3D TOF-MRA10 Jul 2025
- 2025VesselSDF: Distance Field Priors for Vascular Network Reconstruction19 Jun 2025
- 2025Shape-aware Sampling Matters in the Modeling of Multi-Class Tubular Structures14 Jun 2025
- 2025BrainMRDiff: A Diffusion Model for Anatomically Consistent Brain MRI Synthesis6 Apr 2025
- 2025Disconnect to Connect: A Data Augmentation Method for Improving Topology Accuracy in Image Segmentation7 Mar 2025
- 2025TopoMortar: A dataset to evaluate image segmentation methods focused on topology accuracy5 Mar 2025
- 2025COMMA: Coordinate-aware Modulated Mamba Network for 3D Dispersed Vessel Segmentation4 Mar 2025
- 2025Multi-Class Segmentation of Aortic Branches and Zones in Computed Tomography Angiography: The AortaSeg24 Challenge7 Feb 2025
- 2024Conformable Convolution for Topologically Aware Learning of Complex Anatomical Structures29 Dec 2024
- 2024Topology-Aware Exploration of Circle of Willis for CTA and MRA: Segmentation, Detection, and Classification21 Oct 2024
- 2025GLCP: Global-to-Local Connectivity Preservation for Tubular Structure Segmentationcited by 9
- 2025Multi-Class Segmentation of Aortic Branches and Zones in Computed Tomography Angiography: The AortaSeg24 Challengecited by 6
- 2025VesselSDF: Distance Field Priors for Vascular Network Reconstructioncited by 2
- 2024Topology-Aware Exploration of Circle of Willis for CTA and MRA: Segmentation, Detection, and Classificationcited by 1
- 2025TopoMortar: A dataset to evaluate image segmentation methods focused on topology accuracycited by 1
- 2025Disconnect to Connect: A Data Augmentation Method for Improving Topology Accuracy in Image Segmentationcited by 1
- 2025HRVVS: A High-resolution Video Vasculature Segmentation Network via Hierarchical Autoregressive Residual Priorscited by 1
- 2025TopoSculpt: Betti-Steered Topological Sculpting of 3D Fine-grained Tubular Shapescited by 1
- 2026Leveraging Persistence Image to Enhance Robustness and Performance in Curvilinear Structure Segmentationcited by 1
- 2026Robust automatic brain vessel segmentation in 3D CTA scans using dynamic 4D-CTA datacited by 1
- 2026Towards High-Quality Image Segmentation: Improving Topology Accuracy by Penalizing Neighbor Pixelscited by 1
- 2024Conformable Convolution for Topologically Aware Learning of Complex Anatomical Structurescited by 0
12 most cited of 25 All 25 (JSON)
- 2026Beyond Volume Overlap: Surface Matching for Topology-Aware Coronary Artery Segmentation22 Sep 2026
- 2026Widest-Path Reachability Fields for Connectivity-Preserving Slender Structure Segmentation8 Jul 2026
- 2026MorVess: Morphology-Aware Pulmonary Vessel Segmentation Network23 Jun 2026
- 2026CSWinUNETR: Segmentation of Thin Anatomical Structures in Medical Images18 Jun 2026
- 2026vesselFM-CT: Segmenting All Blood Vessels in CT Images for System-Level Cardiovascular Analysis8 Jun 2026
- 2026VesselSim: learning 3D blood vessel segmentation without expert annotations25 May 2026
- 2026MARVEL: Universal Murray's Law-informed Vessel Tree Segmentation and Topology Estimation25 May 2026
- 2026Focus on What Matters: Two-Stage ROI-Aware Refinement for Anatomy-Preserving Fetal Ultrasound Reconstruction26 Apr 2026
- 2026Towards High-Quality Image Segmentation: Improving Topology Accuracy by Penalizing Neighbor Pixels19 Mar 2026
- 2026TubeMLLM: A Foundation Model for Topology Knowledge Exploration in Vessel-like Anatomy10 Mar 2026
- 2026Robust automatic brain vessel segmentation in 3D CTA scans using dynamic 4D-CTA data30 Jan 2026
- 2026Leveraging Persistence Image to Enhance Robustness and Performance in Curvilinear Structure Segmentation25 Jan 2026
12 newest of 25 All 25 (JSON)