Beyond Volume Overlap: Surface Matching for Topology-Aware Coronary Artery Segmentation
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Abstract (arXiv)
Accurate coronary artery segmentation on coronary computed tomography angiography (CCTA) is essential for diagnosing coronary artery disease. Deep networks are conventionally trained and evaluated with the Dice coefficient, but volume-overlap metrics are poorly suited to thin, tubular anatomy: since most voxels belong to a few thickproximal segments, a missing distal branch barely affects Dice despite severely disrupting the connectivity required for clinical use. We introduce a surface metric that matches predicted and reference surface points via bipartite assignment under a localized, vessel-radius tolerance, reporting precision, recall, and F1 with decoupled false positives (spurious branches) and false negatives (missed branches) a distinction the symmetric Dice cannot make. With it we show that a strong Dice-trained baseline omits far more vessel surface than it hallucinates, an asymmetry its high Dice hides. Building on this, we propose a differentiable surface loss that simultaneously suppresses spurious mass and recovers absent structure, validated by fine-tuning three backbones (nnU-Net, SwinUNETR, NexToU) on two public benchmarks (Image-CAS, ASOCA). Against a matched-epoch control, it significantly improves surface F1 by recovering missed distal vessels at comparable Dice. Our findings argue for measuring and optimizing the vessel surface, not the volume it overlaps. Code
Key facts. No citing papers in the map yet (data through 14 Oct 2026). Builds on 9 of its 17 references that are in the map. First posted on arXiv 22 Sep 2026.
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References · 9
- 2020End-to-End Object Detection with Transformerscited by 7,414
- 2022Swin UNETR: Swin Transformers for Semantic Segmentation of Brain Tumors in MRI Imagescited by 830
- 2020clDice -- A Novel Topology-Preserving Loss Function for Tubular Structure Segmentationcited by 294
- 2019Topology-Preserving Deep Image Segmentationcited by 198
- 2018Boundary loss for highly unbalanced segmentationcited by 190
- 2022ImageCAS: A Large-Scale Dataset and Benchmark for Coronary Artery Segmentation based on Computed Tomography Angiography Imagescited by 55
- 2024Centerline Boundary Dice Loss for Vascular Segmentationcited by 27
- 2023NexToU: Efficient Topology-Aware U-Net for Medical Image Segmentationcited by 10
- 2025A public cardiac CT dataset featuring the left atrial appendagecited by 2
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