Hyperbolic Graph Diffusion Model
On the map: Diffusion models → Flow matching, time series and science
Abstract (arXiv)
Diffusion generative models (DMs) have achieved promising results in image and graph generation. However, real-world graphs, such as social networks, molecular graphs, and traffic graphs, generally share non-Euclidean topologies and hidden hierarchies. For example, the degree distributions of graphs are mostly power-law distributions. The current latent diffusion model embeds the hierarchical data in a Euclidean space, which leads to distortions and interferes with modeling the distribution. Instead, hyperbolic space has been found to be more suitable for capturing complex hierarchical structures due to its exponential growth property. In order to simultaneously utilize the data generation capabilities of diffusion models and the ability of hyperbolic embeddings to extract latent hierarchical distributions, we propose a novel graph generation method called, Hyperbolic Graph Diffusion Model (HGDM), which consists of an auto-encoder to encode nodes into successive hyperbolic embeddings, and a DM that operates in the hyperbolic latent space. HGDM captures the crucial graph structure distributions by constructing a hyperbolic potential node space that incorporates edge information. Extensive experiments show that HGDM achieves better performance in generic graph and molecule generation benchmarks, with a 48% improvement in the quality of graph generation with highly hierarchical structures.
Key facts. Cited by 6 papers in the map (data through 7 Oct 2026). Placed in Flow matching, time series and science, one of 14 directions in Diffusion models. Builds on 35 of its 53 references that are in the map. First posted on arXiv 13 Jun 2023.
Builds on
35 of 53 references.
Closest ancestors · 3
Same direction, newest first
- 2022Equivariant Diffusion for Molecule Generation in 3D31 Mar
- 2022GeoDiff: a Geometric Diffusion Model for Molecular Conformation Generation6 Mar
- 2020Permutation Invariant Graph Generation via Score-Based Generative Modeling2 Mar
Other references · 32
- 2015Deep Residual Learning for Image Recognitioncited by 51,809
- 2020Denoising Diffusion Probabilistic Modelscited by 20,851
- 2019PyTorch: An Imperative Style, High-Performance Deep Learning Librarycited by 20,160
- 2021High-Resolution Image Synthesis with Latent Diffusion Modelscited by 18,694
- 2020Denoising Diffusion Implicit Modelscited by 9,655
- 2020Score-Based Generative Modeling through Stochastic Differential Equationscited by 8,964
- 2017Graph Attention Networkscited by 8,854
- 2019Generative Modeling by Estimating Gradients of the Data Distributioncited by 4,067
- 2019Graph Neural Networks for Social Recommendationcited by 711
- 2018GraphRNN: Generating Realistic Graphs with Deep Auto-regressive Modelscited by 406
- 2018MolGAN: An implicit generative model for small molecular graphscited by 392
- 2018GraphVAE: Towards Generation of Small Graphs Using Variational Autoencoderscited by 375
20 more
- 2020GraphAF: a Flow-based Autoregressive Model for Molecular Graph Generationcited by 301
- 2022Torsional Diffusion for Molecular Conformer Generationcited by 262
- 2018Learning Continuous Hierarchies in the Lorentz Model of Hyperbolic Geometrycited by 261
- 2019Hyperbolic Graph Neural Networkscited by 244
- 2018Learning Deep Generative Models of Graphscited by 227
- 2018Fr'echet ChemNet Distance: A metric for generative models for molecules in drug discoverycited by 191
- 2018Riemannian Adaptive Optimization Methodscited by 187
- 2020MoFlow: An Invertible Flow Model for Generating Molecular Graphscited by 183
- 2021GraphDF: A Discrete Flow Model for Molecular Graph Generationcited by 177
- 2019Continuous Hierarchical Representations with Poincar'e Variational Auto-Encoderscited by 111
- 2020Geoopt: Riemannian Optimization in PyTorchcited by 109
- 2021Fully Hyperbolic Neural Networkscited by 107
- 2019Graph Normalizing Flowscited by 103
- 2021GraphEBM: Molecular Graph Generation with Energy-Based Modelscited by 85
- 2019Graph Representation Learning: A Surveycited by 75
- 2021A Hyperbolic-to-Hyperbolic Graph Convolutional Networkcited by 53
- 2021Modeling Scale-free Graphs with Hyperbolic Geometry for Knowledge-aware Recommendationcited by 38
- 2021Top-N: Equivariant set and graph generation without exchangeabilitycited by 36
- 2022HRCF: Enhancing Collaborative Filtering via Hyperbolic Geometric Regularizationcited by 34
- 2021Unsupervised Hyperbolic Representation Learning via Message Passing Auto-Encoderscited by 15
Built on by
Citing papers per year: 2024: 1; 2025: 2; 2026: 3.
6 papers.
- 2025GGBall: Graph Generative Model on Poincar'e Ballcited by 3
- 2024Diffusion-based Graph Generative Methodscited by 2
- 2026Hyperbolic Graph Neural Networks Under the Microscope: The Role of Geometry-Task Alignmentcited by 2
- 2026Bias mitigation in graph diffusion modelscited by 1
- 2025Is Noise Conditioning Necessary? A Unified Theory of Unconditional Graph Diffusion Modelscited by 0
- 2026GraphK: Variable-Size Graph Generation with Efficient Edge Constructioncited by 0
- 2026GraphK: Variable-Size Graph Generation with Efficient Edge Construction19 Aug 2026
- 2026Bias mitigation in graph diffusion models2 Apr 2026
- 2026Hyperbolic Graph Neural Networks Under the Microscope: The Role of Geometry-Task Alignment2 Feb 2026
- 2025GGBall: Graph Generative Model on Poincar'e Ball8 Jun 2025
- 2025Is Noise Conditioning Necessary? A Unified Theory of Unconditional Graph Diffusion Models28 May 2025
- 2024Diffusion-based Graph Generative Methods28 Jan 2024
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- 2025Exploring Molecule Generation Using Latent Space Graph Diffusion
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