Attention Mechanisms in Medical Image Segmentation: A Survey
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Abstract (arXiv)
Medical image segmentation plays an important role in computer-aided diagnosis. Attention mechanisms that distinguish important parts from irrelevant parts have been widely used in medical image segmentation tasks. This paper systematically reviews the basic principles of attention mechanisms and their applications in medical image segmentation. First, we review the basic concepts of attention mechanism and formulation. Second, we surveyed over 300 articles related to medical image segmentation, and divided them into two groups based on their attention mechanisms, non-Transformer attention and Transformer attention. In each group, we deeply analyze the attention mechanisms from three aspects based on the current literature work, i.e., the principle of the mechanism (what to use), implementation methods (how to use), and application tasks (where to use). We also thoroughly analyzed the advantages and limitations of their applications to different tasks. Finally, we summarize the current state of research and shortcomings in the field, and discuss the potential challenges in the future, including task specificity, robustness, standard evaluation, etc. We hope that this review can showcase the overall research context of traditional and Transformer attention methods, provide a clear reference for subsequent research, and inspire more advanced attention research, not only in medical image segmentation, but also in other image analysis scenarios.
Key facts. Cited by 9 papers in the map (data through 14 Oct 2026). Builds on 156 of its 332 references that are in the map. First posted on arXiv 29 May 2023.
Builds on
156 of 332 references.
References · 156
- 2017Attention Is All You Needcited by 60,361
- 2020An Image is Worth 16x16 Words: Transformers for Image Recognition at Scalecited by 30,186
- 2021Swin Transformer: Hierarchical Vision Transformer using Shifted Windowscited by 12,139
- 2020End-to-End Object Detection with Transformerscited by 7,414
- 2017Squeeze-and-Excitation Networkscited by 4,789
- 2020Deformable DETR: Deformable Transformers for End-to-End Object Detectioncited by 3,422
- 2021SegFormer: Simple and Efficient Design for Semantic Segmentation with Transformerscited by 2,940
- 2018CBAM: Convolutional Block Attention Modulecited by 2,477
- 2017Non-local Neural Networkscited by 2,293
- 2021Pyramid Vision Transformer: A Versatile Backbone for Dense Prediction without Convolutionscited by 1,962
- 2021TransUNet: Transformers Make Strong Encoders for Medical Image Segmentationcited by 1,558
- 2018Attention U-Net: Learning Where to Look for the Pancreascited by 1,435
38 more
- 2020Rethinking Semantic Segmentation from a Sequence-to-Sequence Perspective with Transformerscited by 1,369
- 2021Swin-Unet: Unet-like Pure Transformer for Medical Image Segmentationcited by 1,222
- 2018Dual Attention Network for Scene Segmentationcited by 1,003
- 2021UNETR: Transformers for 3D Medical Image Segmentationcited by 959
- 2022Swin UNETR: Swin Transformers for Semantic Segmentation of Brain Tumors in MRI Imagescited by 830
- 2018Self-Attention Generative Adversarial Networkscited by 809
- 2018CCNet: Criss-Cross Attention for Semantic Segmentationcited by 718
- 2021The Medical Segmentation Decathloncited by 628
- 2019Kvasir-SEG: A Segmented Polyp Datasetcited by 589
- 2019ECA-Net: Efficient Channel Attention for Deep Convolutional Neural Networkscited by 575
- 2017Skin Lesion Analysis Toward Melanoma Detection: A Challenge at the 2017 International Symposium on Biomedical Imaging (ISBI), Hosted by the International Skin Imaging Collaboration (ISIC)cited by 549
- 2018Identifying the Best Machine Learning Algorithms for Brain Tumor Segmentation, Progression Assessment, and Overall Survival Prediction in the BRATS Challengecited by 511
- 2019The Liver Tumor Segmentation Benchmark (LiTS)cited by 509
- 2021LeViT: a Vision Transformer in ConvNet's Clothing for Faster Inferencecited by 475
- 2020PraNet: Parallel Reverse Attention Network for Polyp Segmentationcited by 460
- 2021Self-Supervised Pre-Training of Swin Transformers for 3D Medical Image Analysiscited by 422
- 2019GCNet: Non-local Networks Meet Squeeze-Excitation Networks and Beyondcited by 331
- 2020CHAOS Challenge -- Combined (CT-MR) Healthy Abdominal Organ Segmentationcited by 309
- 2021TransBTS: Multimodal Brain Tumor Segmentation Using Transformercited by 265
- 2021TransFuse: Fusing Transformers and CNNs for Medical Image Segmentationcited by 258
- 2022Transformers in Medical Imaging: A Surveycited by 245
- 2019Deep Learning for Segmentation using an Open Large-Scale Dataset in 2D Echocardiographycited by 244
- 2021Attention Mechanisms in Computer Vision: A Surveycited by 232
- 2019REFUGE Challenge: A Unified Framework for Evaluating Automated Methods for Glaucoma Assessment from Fundus Photographscited by 228
- 2021CoTr: Efficiently Bridging CNN and Transformer for 3D Medical Image Segmentationcited by 227
- 2016A Benchmark for Endoluminal Scene Segmentation of Colonoscopy Imagescited by 221
- 2016SCA-CNN: Spatial and Channel-wise Attention in Convolutional Networks for Image Captioningcited by 219
- 2016Skin Lesion Analysis toward Melanoma Detection: A Challenge at the International Symposium on Biomedical Imaging (ISBI) 2016, hosted by the International Skin Imaging Collaboration (ISIC)cited by 198
- 2021UCTransNet: Rethinking the Skip Connections in U-Net from a Channel-wise Perspective with Transformercited by 197
- 2020FcaNet: Frequency Channel Attention Networkscited by 179
- 2019The KiTS19 Challenge Data: 300 Kidney Tumor Cases with Clinical Context, CT Semantic Segmentations, and Surgical Outcomescited by 172
- 20192017 Robotic Instrument Segmentation Challengecited by 168
- 2021Polyp-PVT: Polyp Segmentation with Pyramid Vision Transformerscited by 159
- 2018Pyramid Attention Network for Semantic Segmentationcited by 149
- 2018Gather-Excite: Exploiting Feature Context in Convolutional Neural Networkscited by 139
- 2020TAM: Temporal Adaptive Module for Video Recognitioncited by 139
- 2021DS-TransUNet:Dual Swin Transformer U-Net for Medical Image Segmentationcited by 126
- 2018Concurrent Spatial and Channel Squeeze & Excitation in Fully Convolutional Networkscited by 122
50 most cited of 156 All 156 (JSON)
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Citing papers per year: 2024: 1; 2025: 6; 2026: 2.
9 papers.
- 2025LGPS: A Lightweight GAN-Based Approach for Polyp Segmentation in Colonoscopy Imagescited by 3
- 2025Integrating Biological and Machine Intelligence: Attention Mechanisms in Brain-Computer Interfacescited by 2
- 2025GeloVec: Higher Dimensional Geometric Smoothing for Coherent Visual Feature Extraction in Image Segmentationcited by 2
- 2025XBusNet: Text-Guided Breast Ultrasound Segmentation via Multimodal Vision-Language Learningcited by 2
- 2024Vertical Federated Image Segmentationcited by 0
- 2025NAADA: A Noise-Aware Attention Denoising Autoencoder for Dental Panoramic Radiographscited by 0
- 2025AI-CNet3D: An Anatomically-Informed Cross-Attention Network with Multi-Task Consistency Fine-tuning for 3D Glaucoma Classificationcited by 0
- 2026Adaptive Dual Residual U-Net with Attention Gate and Multiscale Spatial Attention Mechanisms (ADRUwAMS)cited by 0
- 2026MedCAGD: Context-Aware Gated Decoder for Efficient Medical Image Segmentationcited by 0
- 2026MedCAGD: Context-Aware Gated Decoder for Efficient Medical Image Segmentation1 Jul 2026
- 2026Adaptive Dual Residual U-Net with Attention Gate and Multiscale Spatial Attention Mechanisms (ADRUwAMS)10 Apr 2026
- 2025AI-CNet3D: An Anatomically-Informed Cross-Attention Network with Multi-Task Consistency Fine-tuning for 3D Glaucoma Classification1 Oct 2025
- 2025XBusNet: Text-Guided Breast Ultrasound Segmentation via Multimodal Vision-Language Learning8 Sep 2025
- 2025NAADA: A Noise-Aware Attention Denoising Autoencoder for Dental Panoramic Radiographs24 Jun 2025
- 2025GeloVec: Higher Dimensional Geometric Smoothing for Coherent Visual Feature Extraction in Image Segmentation2 May 2025
- 2025LGPS: A Lightweight GAN-Based Approach for Polyp Segmentation in Colonoscopy Images24 Mar 2025
- 2025Integrating Biological and Machine Intelligence: Attention Mechanisms in Brain-Computer Interfaces26 Feb 2025
- 2024Vertical Federated Image Segmentation15 Jan 2024