Revisiting Heterophily For Graph Neural Networks
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Abstract (arXiv)
Graph Neural Networks (GNNs) extend basic Neural Networks (NNs) by using graph structures based on the relational inductive bias (homophily assumption). While GNNs have been commonly believed to outperform NNs in real-world tasks, recent work has identified a non-trivial set of datasets where their performance compared to NNs is not satisfactory. Heterophily has been considered the main cause of this empirical observation and numerous works have been put forward to address it. In this paper, we first revisit the widely used homophily metrics and point out that their consideration of only graph-label consistency is a shortcoming. Then, we study heterophily from the perspective of post-aggregation node similarity and define new homophily metrics, which are potentially advantageous compared to existing ones. Based on this investigation, we prove that some harmful cases of heterophily can be effectively addressed by local diversification operation. Then, we propose the Adaptive Channel Mixing (ACM), a framework to adaptively exploit aggregation, diversification and identity channels node-wisely to extract richer localized information for diverse node heterophily situations. ACM is more powerful than the commonly used uni-channel framework for node classification tasks on heterophilic graphs and is easy to be implemented in baseline GNN layers. When evaluated on 10 benchmark node classification tasks, ACM-augmented baselines consistently achieve significant performance gain, exceeding state-of-the-art GNNs on most tasks without incurring significant computational burden.
Key facts. Cited by 169 papers in the map (data through 7 Oct 2026). Builds on 33 of its 61 references that are in the map. First posted on arXiv 14 Oct 2022.
Builds on
33 of 61 references.
References · 33
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- 2019Revisiting Graph Neural Networks: All We Have is Low-Pass Filterscited by 260
- 2022Neural Sheaf Diffusion: A Topological Perspective on Heterophily and Oversmoothing in GNNscited by 208
- 2020Graph Neural Networks with Heterophilycited by 202
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- 2021Two Sides of the Same Coin: Heterophily and Oversmoothing in Graph Convolutional Neural Networkscited by 182
- 2021Is Homophily a Necessity for Graph Neural Networks?cited by 182
- 2022Finding Global Homophily in Graph Neural Networks When Meeting Heterophilycited by 179
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Citing papers per year: 2022: 9; 2023: 38; 2024: 54; 2025: 37; 2026: 31.
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- 2023When Do Graph Neural Networks Help with Node Classification? Investigating the Impact of Homophily Principle on Node Distinguishabilitycited by 7
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50 newest of 169 All 169 (JSON)
- 2023A critical look at the evaluation of GNNs under heterophily: Are we really making progress?cited by 332
- 2023Edge Directionality Improves Learning on Heterophilic Graphscited by 88
- 2024Classic GNNs are Strong Baselines: Reassessing GNNs for Node Classificationcited by 83
- 2023Attending to Graph Transformerscited by 81
- 2022GREAD: Graph Neural Reaction-Diffusion Networkscited by 54
- 2024ARC: A Generalist Graph Anomaly Detector with In-Context Learningcited by 46
- 2023MUDiff: Unified Diffusion for Complete Molecule Generationcited by 41
- 2023Demystifying Structural Disparity in Graph Neural Networks: Can One Size Fit All?cited by 41
- 2023Simple and Asymmetric Graph Contrastive Learning without Augmentationscited by 37
- 2024Fully-inductive Node Classification on Arbitrary Graphscited by 36
- 2023OpenGSL: A Comprehensive Benchmark for Graph Structure Learningcited by 30
- 2024Towards Graph Foundation Models: Learning Generalities Across Graphs via Task-Treescited by 30
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- 2026Efficient Dynamic Algorithms for Graph Neural Networks with Non-Linear Propagation26 Sep 2026
- 2026Learning the Graph and the Embedding Together: Classifier-Independent Rewiring for Heterophilic Node Classification26 Sep 2026
- 2026Preserving Geometric Integrity in Graph Prompting via Measure-Constrained Optimal Transport20 Sep 2026
- 2026Disentangling Homophily and Rarity: Explaining Failure in Graph Neural Networks14 Aug 2026
- 2026Convex--Concave Quadratic Spectral Filtering for Graph Neural Networks23 Jun 2026
- 2026Towards Federated Long-Tailed Graph Learning: An Energy-Guided Dual Decoupling Approach23 Jun 2026
- 2026Geometrical fairness in graph neural networks16 Jun 2026
- 2026Context-aware Modality-Topology Co-Alignment for Multimodal Attributed Graphs12 Jun 2026
- 2026Multimodal Graph Negative Learning11 Jun 2026
- 2026When Design Rules Break: Benchmark Composition Determines Whether Label Informativeness Predicts GNN Aggregator Choice8 Jun 2026
- 2026Graph Cascades: Contagion-Based Mesoscopic Rewiring for Structure-Aware Graph Machine Learning3 Jun 2026
- 2026Gate the Filter, Not the Message: Node-Channel Mixtures for Pre-Propagation GNNs1 Jun 2026
12 newest of 164 All 164 (JSON)