mlsanityData to 7 Oct 2026

Revisiting Heterophily For Graph Neural Networks

arXiv 2210.07606 ↗First posted 14 Oct 2022cs.LG cs.SIcited by 169

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Abstract (arXiv)

Graph Neural Networks (GNNs) extend basic Neural Networks (NNs) by using graph structures based on the relational inductive bias (homophily assumption). While GNNs have been commonly believed to outperform NNs in real-world tasks, recent work has identified a non-trivial set of datasets where their performance compared to NNs is not satisfactory. Heterophily has been considered the main cause of this empirical observation and numerous works have been put forward to address it. In this paper, we first revisit the widely used homophily metrics and point out that their consideration of only graph-label consistency is a shortcoming. Then, we study heterophily from the perspective of post-aggregation node similarity and define new homophily metrics, which are potentially advantageous compared to existing ones. Based on this investigation, we prove that some harmful cases of heterophily can be effectively addressed by local diversification operation. Then, we propose the Adaptive Channel Mixing (ACM), a framework to adaptively exploit aggregation, diversification and identity channels node-wisely to extract richer localized information for diverse node heterophily situations. ACM is more powerful than the commonly used uni-channel framework for node classification tasks on heterophilic graphs and is easy to be implemented in baseline GNN layers. When evaluated on 10 benchmark node classification tasks, ACM-augmented baselines consistently achieve significant performance gain, exceeding state-of-the-art GNNs on most tasks without incurring significant computational burden.

Key facts. Cited by 169 papers in the map (data through 7 Oct 2026). Builds on 33 of its 61 references that are in the map. First posted on arXiv 14 Oct 2022.

Builds on

33 of 61 references.

References · 33

  1. 2014Adam: A Method for Stochastic Optimizationcited by 36,960
  2. 2016Semi-Supervised Classification with Graph Convolutional Networkscited by 11,282
  3. 2017Graph Attention Networkscited by 8,854
  4. 2017Inductive Representation Learning on Large Graphscited by 6,284
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  8. 2019Simplifying Graph Convolutional Networkscited by 1,470
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  10. 2016Geometric deep learning: going beyond Euclidean datacited by 1,042
  11. 2018Predict then Propagate: Graph Neural Networks meet Personalized PageRankcited by 987
  12. 2018Representation Learning on Graphs with Jumping Knowledge Networkscited by 875
21 more
  1. 2020Simple and Deep Graph Convolutional Networkscited by 857
  2. 2020Geom-GCN: Geometric Graph Convolutional Networkscited by 821
  3. 2013Speech Recognition with Deep Recurrent Neural Networkscited by 666
  4. 2020Adaptive Universal Generalized PageRank Graph Neural Networkcited by 592
  5. 2019Multi-scale Attributed Node Embeddingcited by 543
  6. 2019MixHop: Higher-Order Graph Convolutional Architectures via Sparsified Neighborhood Mixingcited by 442
  7. 2021Beyond Low-frequency Information in Graph Convolutional Networkscited by 361
  8. 2021Large Scale Learning on Non-Homophilous Graphs: New Benchmarks and Strong Simple Methodscited by 309
  9. 2019Revisiting Graph Neural Networks: All We Have is Low-Pass Filterscited by 260
  10. 2022Neural Sheaf Diffusion: A Topological Perspective on Heterophily and Oversmoothing in GNNscited by 208
  11. 2020Graph Neural Networks with Heterophilycited by 202
  12. 2021BernNet: Learning Arbitrary Graph Spectral Filters via Bernstein Approximationcited by 195
  13. 2021Two Sides of the Same Coin: Heterophily and Oversmoothing in Graph Convolutional Neural Networkscited by 182
  14. 2021Is Homophily a Necessity for Graph Neural Networks?cited by 182
  15. 2022Finding Global Homophily in Graph Neural Networks When Meeting Heterophilycited by 179
  16. 2020Characteristic Functions on Graphs: Birds of a Feather, from Statistical Descriptors to Parametric Modelscited by 116
  17. 2020Non-Local Graph Neural Networkscited by 91
  18. 2021New Benchmarks for Learning on Non-Homophilous Graphscited by 81
  19. 2019Break the Ceiling: Stronger Multi-scale Deep Graph Convolutional Networkscited by 62
  20. 2020Training Matters: Unlocking Potentials of Deeper Graph Convolutional Neural Networkscited by 7
  21. 2021Simple Truncated SVD based Model for Node Classification on Heterophilic Graphscited by 4

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Cited by year (2026 to 7 Oct)

Citing papers per year: 2022: 9; 2023: 38; 2024: 54; 2025: 37; 2026: 31.

169 papers.

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  1. 2023A critical look at the evaluation of GNNs under heterophily: Are we really making progress?cited by 332
  2. 2023Edge Directionality Improves Learning on Heterophilic Graphscited by 88
  3. 2024Classic GNNs are Strong Baselines: Reassessing GNNs for Node Classificationcited by 83
  4. 2023Attending to Graph Transformerscited by 81
  5. 2022GREAD: Graph Neural Reaction-Diffusion Networkscited by 54
  6. 2024ARC: A Generalist Graph Anomaly Detector with In-Context Learningcited by 46
  7. 2023MUDiff: Unified Diffusion for Complete Molecule Generationcited by 41
  8. 2023Demystifying Structural Disparity in Graph Neural Networks: Can One Size Fit All?cited by 41
  9. 2023Simple and Asymmetric Graph Contrastive Learning without Augmentationscited by 37
  10. 2024Fully-inductive Node Classification on Arbitrary Graphscited by 36
  11. 2023OpenGSL: A Comprehensive Benchmark for Graph Structure Learningcited by 30
  12. 2024Towards Graph Foundation Models: Learning Generalities Across Graphs via Task-Treescited by 30
38 more
  1. 2023Graph Neural Convection-Diffusion with Heterophilycited by 26
  2. 2024AdaFGL: A New Paradigm for Federated Node Classification with Topology Heterogeneitycited by 25
  3. 2024Unifying Generation and Prediction on Graphs with Latent Graph Diffusioncited by 24
  4. 2024How Universal Polynomial Bases Enhance Spectral Graph Neural Networks: Heterophily, Over-smoothing, and Over-squashingcited by 24
  5. 2023HoloNets: Spectral Convolutions do extend to Directed Graphscited by 20
  6. 2022Improving Graph Neural Networks with Learnable Propagation Operatorscited by 19
  7. 2022Complete the Missing Half: Augmenting Aggregation Filtering with Diversification for Graph Convolutional Neural Networkscited by 19
  8. 2023Rayleigh Quotient Graph Neural Networks for Graph-level Anomaly Detectioncited by 19
  9. 2023Breaking the Entanglement of Homophily and Heterophily in Semi-supervised Node Classificationcited by 19
  10. 2025Oversmoothing, Oversquashing, Heterophily, Long-Range, and more: Demystifying Common Beliefs in Graph Machine Learningcited by 18
  11. 2022TIDE: Time Derivative Diffusion for Deep Learning on Graphscited by 17
  12. 2024Node-wise Filtering in Graph Neural Networks: A Mixture of Experts Approachcited by 17
  13. 2024Unleashing the Potential of Fractional Calculus in Graph Neural Networks with FRONDcited by 16
  14. 2025No Metric to Rule Them All: Toward Principled Evaluations of Graph-Learning Datasetscited by 16
  15. 2023LSGNN: Towards General Graph Neural Network in Node Classification by Local Similaritycited by 15
  16. 2024Understanding Heterophily for Graph Neural Networkscited by 15
  17. 2022Homophily modulates double descent generalization in graph convolution networkscited by 13
  18. 2023Half-Hop: A graph upsampling approach for slowing down message passingcited by 13
  19. 2024Large Language Model Meets Graph Neural Network in Knowledge Distillationcited by 13
  20. 2024ReactZyme: A Benchmark for Enzyme-Reaction Predictioncited by 13
  21. 2023Node Embedding from Neural Hamiltonian Orbits in Graph Neural Networkscited by 12
  22. 2024When Heterophily Meets Heterogeneous Graphs: Latent Graphs Guided Unsupervised Representation Learningcited by 12
  23. 2023Leveraging Label Non-Uniformity for Node Classification in Graph Neural Networkscited by 11
  24. 2024Mitigating Oversmoothing Through Reverse Process of GNNs for Heterophilic Graphscited by 10
  25. 2025Cooperative Sheaf Neural Networkscited by 10
  26. 2026Learning Posterior Predictive Distributions for Node Classification from Synthetic Graph Priorscited by 10
  27. 2024On The Temporal Domain of Differential Equation Inspired Graph Neural Networkscited by 9
  28. 2024Feature Distribution on Graph Topology Mediates the Effect of Graph Convolution: Homophily Perspectivecited by 9
  29. 2024What Is Missing In Homophily? Disentangling Graph Homophily For Graph Neural Networkscited by 9
  30. 2025Homophily Enhanced Graph Domain Adaptationcited by 9
  31. 2023PathMLP: Smooth Path Towards High-order Homophilycited by 8
  32. 2024Sign is Not a Remedy: Multiset-to-Multiset Message Passing for Learning on Heterophilic Graphscited by 8
  33. 2024Joint Diffusion Processes as an Inductive Bias in Sheaf Neural Networkscited by 8
  34. 2024FSW-GNN: A Bi-Lipschitz WL-Equivalent Graph Neural Networkcited by 8
  35. 2023Neighborhood Homophily-based Graph Convolutional Networkcited by 7
  36. 2023Heterophily-Aware Graph Attention Networkcited by 7
  37. 2023Evaluating Robustness and Uncertainty of Graph Models Under Structural Distributional Shiftscited by 7
  38. 2023When Do Graph Neural Networks Help with Node Classification? Investigating the Impact of Homophily Principle on Node Distinguishabilitycited by 7

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