Graph Neural Reaction Diffusion Models
On the map: Diffusion models → Flow matching, time series and science
Abstract (arXiv)
The integration of Graph Neural Networks (GNNs) and Neural Ordinary and Partial Differential Equations has been extensively studied in recent years. GNN architectures powered by neural differential equations allow us to reason about their behavior, and develop GNNs with desired properties such as controlled smoothing or energy conservation. In this paper we take inspiration from Turing instabilities in a Reaction Diffusion (RD) system of partial differential equations, and propose a novel family of GNNs based on neural RD systems. We textcolorblackdemonstrate that our RDGNN is powerful for the modeling of various data types, from homophilic, to heterophilic, and spatio-temporal datasets. We discuss the theoretical properties of our RDGNN, its implementation, and show that it improves or offers competitive performance to state-of-the-art methods.
Key facts. Cited by 6 papers in the map (data through 7 Oct 2026). Placed in Flow matching, time series and science, one of 14 directions in Diffusion models. Builds on 57 of its 106 references that are in the map. First posted on arXiv 16 Jun 2024.
Builds on
57 of 106 references.
References · 57
- 2015Deep Residual Learning for Image Recognitioncited by 51,809
- 2014Adam: A Method for Stochastic Optimizationcited by 36,960
- 2019PyTorch: An Imperative Style, High-Performance Deep Learning Librarycited by 20,160
- 2016Semi-Supervised Classification with Graph Convolutional Networkscited by 11,282
- 2017Graph Attention Networkscited by 8,854
- 2018Neural Ordinary Differential Equationscited by 3,733
- 2019Fast Graph Representation Learning with PyTorch Geometriccited by 2,414
- 2018Dynamic Graph CNN for Learning on Point Cloudscited by 2,220
- 2016Convolutional Neural Networks on Graphs with Fast Localized Spectral Filteringcited by 2,085
- 2019Simplifying Graph Convolutional Networkscited by 1,470
- 2013Spectral Networks and Locally Connected Networks on Graphscited by 1,097
- 2018Representation Learning on Graphs with Jumping Knowledge Networkscited by 875
38 more
- 2020Simple and Deep Graph Convolutional Networkscited by 857
- 2020Geom-GCN: Geometric Graph Convolutional Networkscited by 821
- 2020On the Bottleneck of Graph Neural Networks and its Practical Implicationscited by 624
- 2020Adaptive Universal Generalized PageRank Graph Neural Networkcited by 592
- 2019Measuring and Relieving the Over-smoothing Problem for Graph Neural Networks from the Topological Viewcited by 544
- 2019Multi-scale Attributed Node Embeddingcited by 543
- 2020Adaptive Graph Convolutional Recurrent Network for Traffic Forecastingcited by 525
- 2016Geometric deep learning on graphs and manifolds using mixture model CNNscited by 468
- 2019EvolveGCN: Evolving Graph Convolutional Networks for Dynamic Graphscited by 443
- 2019MixHop: Higher-Order Graph Convolutional Architectures via Sparsified Neighborhood Mixingcited by 442
- 2019Diffusion Improves Graph Learningcited by 414
- 2018T-GCN: A Temporal Graph ConvolutionalNetwork for Traffic Predictioncited by 399
- 2022Message Passing Neural PDE Solverscited by 368
- 2021Beyond Low-frequency Information in Graph Convolutional Networkscited by 361
- 2020Multipole Graph Neural Operator for Parametric Partial Differential Equationscited by 343
- 2021Large Scale Learning on Non-Homophilous Graphs: New Benchmarks and Strong Simple Methodscited by 309
- 2017PDE-Net: Learning PDEs from Datacited by 304
- 2016Structured Sequence Modeling with Graph Convolutional Recurrent Networkscited by 273
- 2019Revisiting Graph Neural Networks: All We Have is Low-Pass Filterscited by 260
- 2021GRAND: Graph Neural Diffusioncited by 258
- 2020A Note on Over-Smoothing for Graph Neural Networkscited by 245
- 2018Deep Hidden Physics Models: Deep Learning of Nonlinear Partial Differential Equationscited by 233
- 2022Neural Sheaf Diffusion: A Topological Perspective on Heterophily and Oversmoothing in GNNscited by 208
- 2020Combining Label Propagation and Simple Models Out-performs Graph Neural Networkscited by 199
- 2015Trainable Nonlinear Reaction Diffusion: A Flexible Framework for Fast and Effective Image Restorationcited by 194
- 2018Deep Neural Networks Motivated by Partial Differential Equationscited by 187
- 2021Two Sides of the Same Coin: Heterophily and Oversmoothing in Graph Convolutional Neural Networkscited by 182
- 2022Revisiting Heterophily For Graph Neural Networkscited by 169
- 2020Combining Differentiable PDE Solvers and Graph Neural Networks for Fluid Flow Predictioncited by 137
- 2022Graph-Coupled Oscillator Networkscited by 123
- 2021PyTorch Geometric Temporal: Spatiotemporal Signal Processing with Neural Machine Learning Modelscited by 118
- 2019Hamiltonian Graph Networks with ODE Integratorscited by 107
- 2021PDE-GCN: Novel Architectures for Graph Neural Networks Motivated by Partial Differential Equationscited by 106
- 2020Implicit Graph Neural Networkscited by 98
- 2021Breaking the Limit of Graph Neural Networks by Improving the Assortativity of Graphs with Local Mixing Patternscited by 95
- 2021New Benchmarks for Learning on Non-Homophilous Graphscited by 81
- 2018MeshCNN: A Network with an Edgecited by 69
- 2022Anti-Symmetric DGN: a stable architecture for Deep Graph Networkscited by 58
50 most cited of 57 All 57 (JSON)
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Citing papers per year: 2024: 1; 2025: 3; 2026: 2.
6 papers.
- 2024FSW-GNN: A Bi-Lipschitz WL-Equivalent Graph Neural Networkcited by 8
- 2025Permutation Equivariant Neural Controlled Differential Equations for Dynamic Graph Representation Learningcited by 3
- 2026Beyond ReLU: Bifurcation, Oversmoothing, and Topological Priorscited by 2
- 2025Graph Flow Matching: Enhancing Image Generation with Neighbor-Aware Flow Fieldscited by 1
- 2025Graph Neural Regularizers for PDE Inverse Problemscited by 1
- 2026From Diffusion to Reaction-Diffusion: A Dynamical-Systems View of Oversmoothing in Hypergraph Neural Networkscited by 0
- 2026From Diffusion to Reaction-Diffusion: A Dynamical-Systems View of Oversmoothing in Hypergraph Neural Networks17 Jul 2026
- 2026Beyond ReLU: Bifurcation, Oversmoothing, and Topological Priors17 Feb 2026
- 2025Graph Neural Regularizers for PDE Inverse Problems23 Oct 2025
- 2025Permutation Equivariant Neural Controlled Differential Equations for Dynamic Graph Representation Learning25 Jun 2025
- 2025Graph Flow Matching: Enhancing Image Generation with Neighbor-Aware Flow Fields30 May 2025
- 2024FSW-GNN: A Bi-Lipschitz WL-Equivalent Graph Neural Network10 Oct 2024
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