mlsanityData to 14 Oct 2026

Detailed Annotations of Chest X-Rays via CT Projection for Report Understanding

arXiv 2210.03416 ↗First posted 7 Oct 2022cs.CVcited by 26

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Abstract (arXiv)

In clinical radiology reports, doctors capture important information about the patient's health status. They convey their observations from raw medical imaging data about the inner structures of a patient. As such, formulating reports requires medical experts to possess wide-ranging knowledge about anatomical regions with their normal, healthy appearance as well as the ability to recognize abnormalities. This explicit grasp on both the patient's anatomy and their appearance is missing in current medical image-processing systems as annotations are especially difficult to gather. This renders the models to be narrow experts e.g. for identifying specific diseases. In this work, we recover this missing link by adding human anatomy into the mix and enable the association of content in medical reports to their occurrence in associated imagery (medical phrase grounding). To exploit anatomical structures in this scenario, we present a sophisticated automatic pipeline to gather and integrate human bodily structures from computed tomography datasets, which we incorporate in our PAXRay: A Projected dataset for the segmentation of Anatomical structures in X-Ray data. Our evaluation shows that methods that take advantage of anatomical information benefit heavily in visually grounding radiologists' findings, as our anatomical segmentations allow for up to absolute 50% better grounding results on the OpenI dataset as compared to commonly used region proposals. The PAXRay dataset is available at https://constantinseibold.github.io/paxray/.

Key facts. Cited by 26 papers in the map (data through 14 Oct 2026). Builds on 38 of its 77 references that are in the map. First posted on arXiv 7 Oct 2022.

Builds on

38 of 77 references.

References · 38

  1. 2015Deep Residual Learning for Image Recognitioncited by 52,096
  2. 2015U-Net: Convolutional Networks for Biomedical Image Segmentationcited by 19,713
  3. 2015Faster R-CNN: Towards Real-Time Object Detection with Region Proposal Networkscited by 9,639
  4. 2016Grad-CAM: Visual Explanations from Deep Networks via Gradient-based Localizationcited by 6,733
  5. 2016The Cityscapes Dataset for Semantic Urban Scene Understandingcited by 4,444
  6. 2015Learning Deep Features for Discriminative Localizationcited by 2,436
  7. 20163D U-Net: Learning Dense Volumetric Segmentation from Sparse Annotationcited by 1,476
  8. 2019CheXpert: A Large Chest Radiograph Dataset with Uncertainty Labels and Expert Comparisoncited by 1,423
  9. 2017ChestX-ray8: Hospital-scale Chest X-ray Database and Benchmarks on Weakly-Supervised Classification and Localization of Common Thorax Diseasescited by 972
  10. 2019Panoptic Feature Pyramid Networkscited by 645
  11. 2020Contrastive Learning of Medical Visual Representations from Paired Images and Textcited by 641
  12. 2017CheXNet: Radiologist-Level Pneumonia Detection on Chest X-Rays with Deep Learningcited by 461
26 more
  1. 2018Stacked Cross Attention for Image-Text Matchingcited by 416
  2. 2020CheXbert: Combining Automatic Labelers and Expert Annotations for Accurate Radiology Report Labeling Using BERTcited by 337
  3. 2019PadChest: A large chest x-ray image dataset with multi-label annotated reportscited by 309
  4. 2016Multimodal Compact Bilinear Pooling for Visual Question Answering and Visual Groundingcited by 243
  5. 2019A Fast and Accurate One-Stage Approach to Visual Groundingcited by 195
  6. 2019The KiTS19 Challenge Data: 300 Kidney Tumor Cases with Clinical Context, CT Semantic Segmentations, and Surgical Outcomescited by 172
  7. 2018TieNet: Text-Image Embedding Network for Common Thorax Disease Classification and Reporting in Chest X-rayscited by 139
  8. 2020VerSe: A Vertebrae Labelling and Segmentation Benchmark for Multi-detector CT Imagescited by 111
  9. 2020Unsupervised Domain Adaptation in Semantic Segmentation: a Reviewcited by 88
  10. 2022AlignTransformer: Hierarchical Alignment of Visual Regions and Disease Tags for Medical Report Generationcited by 65
  11. 2019Align2Ground: Weakly Supervised Phrase Grounding Guided by Image-Caption Alignmentcited by 51
  12. 2018BioSentVec: creating sentence embeddings for biomedical textscited by 47
  13. 2017Weakly-supervised Visual Grounding of Phrases with Linguistic Structurescited by 40
  14. 2021RATCHET: Medical Transformer for Chest X-ray Diagnosis and Reportingcited by 34
  15. 2021Reference-guided Pseudo-Label Generation for Medical Semantic Segmentationcited by 33
  16. 2021A Computed Tomography Vertebral Segmentation Dataset with Anatomical Variations and Multi-Vendor Scanner Datacited by 28
  17. 2021Panoptic Narrative Groundingcited by 27
  18. 2022Breaking with Fixed Set Pathology Recognition through Report-Guided Contrastive Trainingcited by 26
  19. 2021RibSeg Dataset and Strong Point Cloud Baselines for Rib Segmentation from CT Scanscited by 21
  20. 2021Improving Pneumonia Localization via Cross-Attention on Medical Images and Reportscited by 21
  21. 2021AnaXNet: Anatomy Aware Multi-label Finding Classification in Chest X-raycited by 19
  22. 2020A Generalization of Otsu's Method and Minimum Error Thresholdingcited by 16
  23. 2021Variational Topic Inference for Chest X-Ray Report Generationcited by 16
  24. 2020Fully-automated Body Composition Analysis in Routine CT Imaging Using 3D Semantic Segmentation Convolutional Neural Networkscited by 12
  25. 2017Deep Learning with Lung Segmentation and Bone Shadow Exclusion Techniques for Chest X-Ray Analysis of Lung Cancercited by 10
  26. 2018Bimodal network architectures for automatic generation of image annotation from textcited by 4

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Citing papers per year: 2023: 8; 2024: 5; 2025: 8; 2026: 5.

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  1. 2023CAT-Seg: Cost Aggregation for Open-Vocabulary Semantic Segmentationcited by 219
  2. 2023ScribblePrompt: Fast and Flexible Interactive Segmentation for Any Biomedical Imagecited by 48
  3. 2023CheXmask: a large-scale dataset of anatomical segmentation masks for multi-center chest x-ray imagescited by 33
  4. 2023Accurate Fine-Grained Segmentation of Human Anatomy in Radiographs via Volumetric Pseudo-Labelingcited by 26
  5. 2023What a MESS: Multi-Domain Evaluation of Zero-Shot Semantic Segmentationcited by 24
  6. 2023Complex Organ Mask Guided Radiology Report Generationcited by 22
  7. 2024Tyche: Stochastic In-Context Learning for Medical Image Segmentationcited by 20
  8. 2024Advancing human-centric AI for robust X-ray analysis through holistic self-supervised learningcited by 18
  9. 2025Localizing Before Answering: A Hallucination Evaluation Benchmark for Grounded Medical Multimodal LLMscited by 14
  10. 2023Visual Grounding of Whole Radiology Reports for 3D CT Imagescited by 13
  11. 2024MultiverSeg: Scalable Interactive Segmentation of Biomedical Imaging Datasets with In-Context Guidancecited by 13
  12. 2025CT-GRAPH: Hierarchical Graph Attention Network for Anatomy-Guided CT Report Generationcited by 8
14 more
  1. 2023Stable Segment Anything Modelcited by 6
  2. 2024High-Quality Mask Tuning Matters for Open-Vocabulary Segmentationcited by 5
  3. 2025Show or Tell? Effectively prompting Vision-Language Models for semantic segmentationcited by 4
  4. 2024MoPEFT: A Mixture-of-PEFTs for the Segment Anything Modelcited by 3
  5. 2025Test-Time Optimization for Domain Adaptive Open Vocabulary Segmentationcited by 3
  6. 2025AnyCXR: Human Anatomy Segmentation of Chest X-ray at Any Acquisition Position using Multi-stage Domain Randomized Synthetic Data with Imperfect Annotations and Conditional Joint Annotation Regularization Learningcited by 2
  7. 2025Multi Anatomy X-Ray Foundation Modelcited by 1
  8. 2025VP Lab: a PEFT-Enabled Visual Prompting Laboratory for Semantic Segmentationcited by 0
  9. 2025Pancakes: Consistent Multi-Protocol Image Segmentation Across Biomedical Domainscited by 0
  10. 2026RadGenome-Anatomy: A Large-Scale Anatomy-Labeled Chest Radiograph Dataset via Physically Grounded Volumetric Projectioncited by 0
  11. 2026CheXanatomy: Anatomy-Aware Vision-Language Modeling for Chest Radiographscited by 0
  12. 2026PGE-SAM: Prompt-Guided Feature Enhancement for Interactive Segmentation under Degradationcited by 0
  13. 2026CARE-X: Towards Clinically Useful Radiology VLMs with Auxiliary Supervision, Reward-Aligned Learning, and Tool-Augmented Measurementcited by 0
  14. 2026Preference-Guided Adaptation for Open-Vocabulary Semantic Segmentation via Prompt Disagreementcited by 0