Multi-Modal Masked Autoencoders for Medical Vision-and-Language Pre-Training
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Cited by 30 in Multimodal LLMs / vision-language models, but placed by its own abstract, which didn’t fit.
Abstract (arXiv)
Medical vision-and-language pre-training provides a feasible solution to extract effective vision-and-language representations from medical images and texts. However, few studies have been dedicated to this field to facilitate medical vision-and-language understanding. In this paper, we propose a self-supervised learning paradigm with multi-modal masked autoencoders (M3AE), which learn cross-modal domain knowledge by reconstructing missing pixels and tokens from randomly masked images and texts. There are three key designs to make this simple approach work. First, considering the different information densities of vision and language, we adopt different masking ratios for the input image and text, where a considerably larger masking ratio is used for images. Second, we use visual and textual features from different layers to perform the reconstruction to deal with different levels of abstraction in visual and language. Third, we develop different designs for vision and language decoders (i.e., a Transformer for vision and a multi-layer perceptron for language). To perform a comprehensive evaluation and facilitate further research, we construct a medical vision-and-language benchmark including three tasks. Experimental results demonstrate the effectiveness of our approach, where state-of-the-art results are achieved on all downstream tasks. Besides, we conduct further analysis to better verify the effectiveness of different components of our approach and various settings of pre-training. The source code is available at~urlhttps://github.com/zhjohnchan/M3AE.
Key facts. Cited by 104 papers in the map (data through 7 Oct 2026). Builds on 23 of its 30 references that are in the map. First posted on arXiv 15 Sep 2022.
Builds on
23 of 30 references.
References · 23
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11 more
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- 2019Overcoming Data Limitation in Medical Visual Question Answeringcited by 71
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Citing papers per year: 2022: 3; 2023: 31; 2024: 34; 2025: 20; 2026: 16.
104 papers.
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- 2023PMC-VQA: Visual Instruction Tuning for Medical Visual Question Answeringcited by 333
- 2023PMC-CLIP: Contrastive Language-Image Pre-training using Biomedical Documentscited by 212
- 2024A Comprehensive Survey of Scientific Large Language Models and Their Applications in Scientific Discoverycited by 96
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- 2023EHRXQA: A Multi-Modal Question Answering Dataset for Electronic Health Records with Chest X-ray Imagescited by 53
- 2023ECG-QA: A Comprehensive Question Answering Dataset Combined With Electrocardiogramcited by 52
- 2023Continual Learning for Abdominal Multi-Organ and Tumor Segmentationcited by 43
- 2025Improving Medical Large Vision-Language Models with Abnormal-Aware Feedbackcited by 42
38 more
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- 2023Towards Unifying Medical Vision-and-Language Pre-training via Soft Promptscited by 35
- 2023Enhancing Representation in Radiography-Reports Foundation Model: A Granular Alignment Algorithm Using Masked Contrastive Learningcited by 34
- 2023Continual Self-supervised Learning: Towards Universal Multi-modal Medical Data Representation Learningcited by 34
- 2024WSI-VQA: Interpreting Whole Slide Images by Generative Visual Question Answeringcited by 34
- 2024CXPMRG-Bench: Pre-training and Benchmarking for X-ray Medical Report Generation on CheXpert Plus Datasetcited by 33
- 2023RAMM: Retrieval-augmented Biomedical Visual Question Answering with Multi-modal Pre-trainingcited by 31
- 2023Masked Vision and Language Pre-training with Unimodal and Multimodal Contrastive Losses for Medical Visual Question Answeringcited by 29
- 2024Masked Image Modeling: A Surveycited by 28
- 2024GEMeX: A Large-Scale, Groundable, and Explainable Medical VQA Benchmark for Chest X-ray Diagnosiscited by 28
- 2024Cross-Modal Conditioned Reconstruction for Language-guided Medical Image Segmentationcited by 27
- 2023Medical Vision Language Pretraining: A surveycited by 24
- 2023Multi-task Paired Masking with Alignment Modeling for Medical Vision-Language Pre-trainingcited by 22
- 2024Multi-modal Vision Pre-training for Medical Image Analysiscited by 22
- 2024PeFoMed: Parameter Efficient Fine-tuning of Multimodal Large Language Models for Medical Imagingcited by 21
- 2024Biomedical Visual Instruction Tuning with Clinician Preference Alignmentcited by 21
- 2023Rethinking Vision Transformer and Masked Autoencoder in Multimodal Face Anti-Spoofingcited by 19
- 2024E3D-GPT: Enhanced 3D Visual Foundation for Medical Vision-Language Modelcited by 19
- 2022Swin MAE: Masked Autoencoders for Small Datasetscited by 17
- 2023Rad-ReStruct: A Novel VQA Benchmark and Method for Structured Radiology Reportingcited by 17
- 2023Learning Multiscale Consistency for Self-supervised Electron Microscopy Instance Segmentationcited by 16
- 2024Boosting Masked ECG-Text Auto-Encoders as Discriminative Learnerscited by 16
- 2024MISS: A Generative Pretraining and Finetuning Approach for Med-VQAcited by 14
- 2025MM-Skin: Enhancing Dermatology Vision-Language Model with an Image-Text Dataset Derived from Textbookscited by 14
- 2023Knowledge Boosting: Rethinking Medical Contrastive Vision-Language Pre-Trainingcited by 13
- 2023A scoping review on multimodal deep learning in biomedical images and textscited by 13
- 2024Can LLMs' Tuning Methods Work in Medical Multimodal Domain?cited by 12
- 2024LaPA: Latent Prompt Assist Model For Medical Visual Question Answeringcited by 12
- 2023Towards Medical Artificial General Intelligence via Knowledge-Enhanced Multimodal Pretrainingcited by 11
- 2024Efficiency in Focus: LayerNorm as a Catalyst for Fine-tuning Medical Visual Language Pre-trained Modelscited by 11
- 2023RARE: Robust Masked Graph Autoencodercited by 10
- 2023Bi-VLGM : Bi-Level Class-Severity-Aware Vision-Language Graph Matching for Text Guided Medical Image Segmentationcited by 10
- 2024PairAug: What Can Augmented Image-Text Pairs Do for Radiology?cited by 10
- 2024AnatoMask: Enhancing Medical Image Segmentation with Reconstruction-guided Self-maskingcited by 10
- 2026Efficient Chest X-ray Representation Learning via Semantic-Partitioned Contrastive Learningcited by 10
- 2025Bridged Semantic Alignment for Zero-shot 3D Medical Image Diagnosiscited by 9
- 2025MedOrch: Medical Diagnosis with Tool-Augmented Reasoning Agents for Flexible Extensibilitycited by 9
- 2025anyECG-chat: A Generalist ECG-MLLM for Flexible ECG Input and Multi-Task Understandingcited by 9
50 most cited of 104 All 104 (JSON)
- 2026UniMod: Enhancing Multi-Modal Medical Diagnosis through Cross-Modality and Within-Modality Alignment10 Aug 2026
- 2026HarMoE: Multi-Source Chest Radiograph Pretraining with Dataset-Disentangled Experts3 Aug 2026
- 2026Semantically Calibrated Evidence Composition for CT Vision-Language Learning31 Jul 2026
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- 2026ASAP: Advancing Medical Volumetric Representation Learning with Anatomy-aware Semantically-adaptive Pre-training30 May 2026
- 2026Evidential Reasoning Advances Interpretable Real-World Disease Screening14 May 2026
- 2026CheXmix: Unified Generative Pretraining for Vision Language Models in Medical Imaging24 Apr 2026
- 2026Dual Causal Inference: Integrating Backdoor Adjustment and Instrumental Variable Learning for Medical VQA22 Apr 2026
- 2026KIRA: Knowledge-Intensive Image Retrieval and Reasoning Architecture for Specialized Visual Domains18 Apr 2026
38 more
- 2026Learning to Trim: End-to-End Causal Graph Pruning with Dynamic Anatomical Feature Banks for Medical VQA27 Mar 2026
- 2026Efficient Chest X-ray Representation Learning via Semantic-Partitioned Contrastive Learning7 Mar 2026
- 2026Robust Pre-Training of Medical Vision-and-Language Models with Domain-Invariant Multi-Modal Masked Reconstruction6 Feb 2026
- 2026Clinical-Prior Guided Multi-Modal Learning with Latent Attention Pooling for Gait-Based Scoliosis Screening6 Feb 2026
- 2025CCSD: Cross-Modal Compositional Self-Distillation for Robust Brain Tumor Segmentation with Missing Modalities18 Nov 2025
- 2025Alignment, Mining and Fusion: Representation Alignment with Hard Negative Mining and Selective Knowledge Fusion for Medical Visual Question Answering9 Oct 2025
- 2025TsLLM: Augmenting LLMs for General Time Series Understanding and Prediction1 Oct 2025
- 2025SimCroP: Radiograph Representation Learning with Similarity-driven Cross-granularity Pre-training10 Sep 2025
- 2025NEARL: Interacted Query Adaptation with Orthogonal Regularization for Medical Vision-Language Understanding6 Aug 2025
- 2025Prototype-Enhanced Confidence Modeling for Cross-Modal Medical Image-Report Retrieval5 Aug 2025
- 2025Barriers in Integrating Medical Visual Question Answering into Radiology Workflows: A Scoping Review and Clinicians' Insights9 Jul 2025
- 2025CheXPO: Preference Optimization for Chest X-ray VLMs with Counterfactual Rationale9 Jul 2025
- 2025MOTOR: Multimodal Optimal Transport via Grounded Retrieval in Medical Visual Question Answering28 Jun 2025
- 2025Cause-Effect Driven Optimization for Robust Medical Visual Question Answering with Language Biases22 Jun 2025
- 2025Brain Imaging Foundation Models, Are We There Yet? A Systematic Review of Foundation Models for Brain Imaging and Biomedical Research16 Jun 2025
- 2025Improving Medical Visual Representation Learning with Pathological-level Cross-Modal Alignment and Correlation Exploration12 Jun 2025
- 2025anyECG-chat: A Generalist ECG-MLLM for Flexible ECG Input and Multi-Task Understanding1 Jun 2025
- 2025MedOrch: Medical Diagnosis with Tool-Augmented Reasoning Agents for Flexible Extensibility30 May 2025
- 2025Position: Restructuring of Categories and Implementation of Guidelines Essential for VLM Adoption in Healthcare12 May 2025
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- 2025Structure Causal Models and LLMs Integration in Medical Visual Question Answering5 May 2025
- 2025OFF-CLIP: Improving Normal Detection Confidence in Radiology CLIP with Simple Off-Diagonal Term Auto-Adjustment3 Mar 2025
- 2025Bridged Semantic Alignment for Zero-shot 3D Medical Image Diagnosis7 Jan 2025
- 2025Improving Medical Large Vision-Language Models with Abnormal-Aware Feedback2 Jan 2025
- 2024Multi-Modal Data Exploration via Language Agents24 Dec 2024
- 2024MiniGPT-Pancreas: Multimodal Large Language Model for Pancreas Cancer Classification and Detection20 Dec 2024
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- 2024Memory-Augmented Multimodal LLMs for Surgical VQA via Self-Contained Inquiry17 Nov 2024
- 2024E3D-GPT: Enhanced 3D Visual Foundation for Medical Vision-Language Model18 Oct 2024
- 2024Multi-modal Vision Pre-training for Medical Image Analysis14 Oct 2024
- 2024Boosting Masked ECG-Text Auto-Encoders as Discriminative Learners3 Oct 2024
- 2024Advancing Medical Radiograph Representation Learning: A Hybrid Pre-training Paradigm with Multilevel Semantic Granularity1 Oct 2024
- 2024CXPMRG-Bench: Pre-training and Benchmarking for X-ray Medical Report Generation on CheXpert Plus Dataset1 Oct 2024
- 2024LoRKD: Low-Rank Knowledge Decomposition for Medical Foundation Models29 Sep 2024
- 2024Electrocardiogram Report Generation and Question Answering via Retrieval-Augmented Self-Supervised Modeling13 Sep 2024
- 2024Masked Image Modeling: A Survey13 Aug 2024
- 2024MMCLIP: Cross-modal Attention Masked Modelling for Medical Language-Image Pre-Training28 Jul 2024
- 2024AnatoMask: Enhancing Medical Image Segmentation with Reconstruction-guided Self-masking9 Jul 2024
50 newest of 104 All 104 (JSON)
- 2025Improving Medical Large Vision-Language Models with Abnormal-Aware Feedbackcited by 42
- 2023Enhancing Representation in Radiography-Reports Foundation Model: A Granular Alignment Algorithm Using Masked Contrastive Learningcited by 34
- 2023Medical Vision Language Pretraining: A surveycited by 24
- 2023Multi-task Paired Masking with Alignment Modeling for Medical Vision-Language Pre-trainingcited by 22
- 2024PeFoMed: Parameter Efficient Fine-tuning of Multimodal Large Language Models for Medical Imagingcited by 21
- 2024E3D-GPT: Enhanced 3D Visual Foundation for Medical Vision-Language Modelcited by 19
- 2024MISS: A Generative Pretraining and Finetuning Approach for Med-VQAcited by 14
- 2025MM-Skin: Enhancing Dermatology Vision-Language Model with an Image-Text Dataset Derived from Textbookscited by 14
- 2023Knowledge Boosting: Rethinking Medical Contrastive Vision-Language Pre-Trainingcited by 13
- 2024Can LLMs' Tuning Methods Work in Medical Multimodal Domain?cited by 12
- 2024Efficiency in Focus: LayerNorm as a Catalyst for Fine-tuning Medical Visual Language Pre-trained Modelscited by 11
- 2024PairAug: What Can Augmented Image-Text Pairs Do for Radiology?cited by 10
12 most cited of 30 All 30 (JSON)
- 2026HarMoE: Multi-Source Chest Radiograph Pretraining with Dataset-Disentangled Experts3 Aug 2026
- 2026ASAP: Advancing Medical Volumetric Representation Learning with Anatomy-aware Semantically-adaptive Pre-training30 May 2026
- 2026CheXmix: Unified Generative Pretraining for Vision Language Models in Medical Imaging24 Apr 2026
- 2026Robust Pre-Training of Medical Vision-and-Language Models with Domain-Invariant Multi-Modal Masked Reconstruction6 Feb 2026
- 2025SimCroP: Radiograph Representation Learning with Similarity-driven Cross-granularity Pre-training10 Sep 2025
- 2025CheXPO: Preference Optimization for Chest X-ray VLMs with Counterfactual Rationale9 Jul 2025
- 2025Position: Restructuring of Categories and Implementation of Guidelines Essential for VLM Adoption in Healthcare12 May 2025
- 2025MM-Skin: Enhancing Dermatology Vision-Language Model with an Image-Text Dataset Derived from Textbooks9 May 2025
- 2025Improving Medical Large Vision-Language Models with Abnormal-Aware Feedback2 Jan 2025
- 2024MiniGPT-Pancreas: Multimodal Large Language Model for Pancreas Cancer Classification and Detection20 Dec 2024
- 2024Memory-Augmented Multimodal LLMs for Surgical VQA via Self-Contained Inquiry17 Nov 2024
- 2024E3D-GPT: Enhanced 3D Visual Foundation for Medical Vision-Language Model18 Oct 2024
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- 2024Multi-Modal Data Exploration via Language Agentscited by 7
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- 2023PMC-VQA: Visual Instruction Tuning for Medical Visual Question Answeringcited by 333
- 2023PMC-CLIP: Contrastive Language-Image Pre-training using Biomedical Documentscited by 212
- 2024A Comprehensive Survey of Scientific Large Language Models and Their Applications in Scientific Discoverycited by 96
- 2024Foundation Model for Advancing Healthcare: Challenges, Opportunities, and Future Directionscited by 77
- 2023Learning Multi-modal Representations by Watching Hundreds of Surgical Video Lecturescited by 68
- 2022Delving into Masked Autoencoders for Multi-Label Thorax Disease Classificationcited by 65
- 2023Large AI Models in Health Informatics: Applications, Challenges, and the Futurecited by 61
- 2023Bridging Vision and Language Encoders: Parameter-Efficient Tuning for Referring Image Segmentationcited by 61
- 2023EHRXQA: A Multi-Modal Question Answering Dataset for Electronic Health Records with Chest X-ray Imagescited by 53
- 2023ECG-QA: A Comprehensive Question Answering Dataset Combined With Electrocardiogramcited by 52
- 2023Continual Learning for Abdominal Multi-Organ and Tumor Segmentationcited by 43
- 2024CARZero: Cross-Attention Alignment for Radiology Zero-Shot Classificationcited by 40
12 most cited of 68 All 68 (JSON)
- 2026UniMod: Enhancing Multi-Modal Medical Diagnosis through Cross-Modality and Within-Modality Alignment10 Aug 2026
- 2026Semantically Calibrated Evidence Composition for CT Vision-Language Learning31 Jul 2026
- 2026Medical-Checklist: Assessing the Comprehension of Medical Images by Multimodal Models24 Jul 2026
- 2026Teach-to-Reason: Competition-Guided Reasoning with a Self-Improving Teacher24 Jun 2026
- 2026Evidential Fusion Network for Multimodal Survival Prediction under Missing Modalities18 Jun 2026
- 2026EyeMVP: OCT-Informed Fundus Representation Learning via Paired CFP--OCT Pretraining13 Jun 2026
- 2026Evidential Reasoning Advances Interpretable Real-World Disease Screening14 May 2026
- 2026Dual Causal Inference: Integrating Backdoor Adjustment and Instrumental Variable Learning for Medical VQA22 Apr 2026
- 2026Learning to Trim: End-to-End Causal Graph Pruning with Dynamic Anatomical Feature Banks for Medical VQA27 Mar 2026
- 2026Efficient Chest X-ray Representation Learning via Semantic-Partitioned Contrastive Learning7 Mar 2026
- 2026Clinical-Prior Guided Multi-Modal Learning with Latent Attention Pooling for Gait-Based Scoliosis Screening6 Feb 2026
- 2025CCSD: Cross-Modal Compositional Self-Distillation for Robust Brain Tumor Segmentation with Missing Modalities18 Nov 2025
12 newest of 68 All 68 (JSON)