Multi-modal Vision Pre-training for Medical Image Analysis
Not on the map. Why?
Abstract (arXiv)
Self-supervised learning has greatly facilitated medical image analysis by suppressing the training data requirement for real-world applications. Current paradigms predominantly rely on self-supervision within uni-modal image data, thereby neglecting the inter-modal correlations essential for effective learning of cross-modal image representations. This limitation is particularly significant for naturally grouped multi-modal data, e.g., multi-parametric MRI scans for a patient undergoing various functional imaging protocols in the same study. To bridge this gap, we conduct a novel multi-modal image pre-training with three proxy tasks to facilitate the learning of cross-modality representations and correlations using multi-modal brain MRI scans (over 2.4 million images in 16,022 scans of 3,755 patients), i.e., cross-modal image reconstruction, modality-aware contrastive learning, and modality template distillation. To demonstrate the generalizability of our pre-trained model, we conduct extensive experiments on various benchmarks with ten downstream tasks. The superior performance of our method is reported in comparison to state-of-the-art pre-training methods, with Dice Score improvement of 0.28%-14.47% across six segmentation benchmarks and a consistent accuracy boost of 0.65%-18.07% in four individual image classification tasks.
Key facts. Cited by 23 papers in the map (data through 14 Oct 2026). Builds on 44 of its 67 references that are in the map. First posted on arXiv 14 Oct 2024.
Builds on
44 of 67 references.
References · 44
- 2015U-Net: Convolutional Networks for Biomedical Image Segmentationcited by 19,713
- 2021Masked Autoencoders Are Scalable Vision Learnerscited by 7,403
- 2021An Empirical Study of Training Self-Supervised Vision Transformerscited by 1,616
- 2021SimMIM: A Simple Framework for Masked Image Modelingcited by 1,153
- 2021UNETR: Transformers for 3D Medical Image Segmentationcited by 959
- 2022Swin UNETR: Swin Transformers for Semantic Segmentation of Brain Tumors in MRI Imagescited by 830
- 2021The RSNA-ASNR-MICCAI BraTS 2021 Benchmark on Brain Tumor Segmentation and Radiogenomic Classificationcited by 518
- 2020Dataset Condensation with Gradient Matchingcited by 516
- 2018Identifying the Best Machine Learning Algorithms for Brain Tumor Segmentation, Progression Assessment, and Overall Survival Prediction in the BRATS Challengecited by 511
- 2022Dataset Distillation by Matching Training Trajectoriescited by 442
- 2021Self-Supervised Pre-Training of Swin Transformers for 3D Medical Image Analysiscited by 422
- 2021Dataset Condensation with Distribution Matchingcited by 365
32 more
- 2021Dataset Condensation with Differentiable Siamese Augmentationcited by 291
- 2021Dataset Distillation with Infinitely Wide Convolutional Networkscited by 218
- 2022UniFormer: Unifying Convolution and Self-attention for Visual Recognitioncited by 206
- 2022Scaling Up Dataset Distillation to ImageNet-1K with Constant Memorycited by 181
- 2022Dataset Distillation using Neural Feature Regressioncited by 177
- 2023Multi-modal Learning with Missing Modality via Shared-Specific Feature Modellingcited by 163
- 2022Multi-Granularity Cross-modal Alignment for Generalized Medical Visual Representation Learningcited by 159
- 2022Efficient Dataset Distillation Using Random Feature Approximationcited by 111
- 2022ISLES 2022: A multi-center magnetic resonance imaging stroke lesion segmentation datasetcited by 106
- 2022Remember the Past: Distilling Datasets into Addressable Memories for Neural Networkscited by 104
- 2022Multi-Modal Masked Autoencoders for Medical Vision-and-Language Pre-Trainingcited by 104
- 2024VoCo: A Simple-yet-Effective Volume Contrastive Learning Framework for 3D Medical Image Analysiscited by 75
- 2022Masked Image Modeling Advances 3D Medical Image Analysiscited by 72
- 2021Transferable Visual Words: Exploiting the Semantics of Anatomical Patterns for Self-supervised Learningcited by 68
- 2021Preservational Learning Improves Self-supervised Medical Image Models by Reconstructing Diverse Contextscited by 60
- 2019Multimodal Self-Supervised Learning for Medical Image Analysiscited by 57
- 2023M3AE: Multimodal Representation Learning for Brain Tumor Segmentation with Missing Modalitiescited by 56
- 2023The ASNR-MICCAI Brain Tumor Segmentation (BraTS) Challenge 2023: Intracranial Meningiomacited by 53
- 2023The Brain Tumor Segmentation (BraTS) Challenge 2023: Glioma Segmentation in Sub-Saharan Africa Patient Population (BraTS-Africa)cited by 51
- 2023The Brain Tumor Segmentation (BraTS) Challenge 2023: Focus on Pediatrics (CBTN-CONNECT-DIPGR-ASNR-MICCAI BraTS-PEDs)cited by 49
- 2022DiRA: Discriminative, Restorative, and Adversarial Learning for Self-supervised Medical Image Analysiscited by 48
- 2021The University of California San Francisco Preoperative Diffuse Glioma MRI (UCSF-PDGM) Datasetcited by 43
- 2022Delving into Effective Gradient Matching for Dataset Condensationcited by 40
- 2023PCRLv2: A Unified Visual Information Preservation Framework for Self-supervised Pre-training in Medical Image Analysiscited by 40
- 2023Geometric Visual Similarity Learning in 3D Medical Image Self-supervised Pre-trainingcited by 37
- 2022Dataset Distillation Using Parameter Pruningcited by 27
- 2023Anatomical Invariance Modeling and Semantic Alignment for Self-supervised Learning in 3D Medical Image Analysiscited by 26
- 2023Disruptive Autoencoders: Leveraging Low-level features for 3D Medical Image Pre-trainingcited by 15
- 2023Enhancing Modality-Agnostic Representations via Meta-Learning for Brain Tumor Segmentationcited by 14
- 2023MUSCLE: Multi-task Self-supervised Continual Learning to Pre-train Deep Models for X-ray Images of Multiple Body Partscited by 13
- 2021BT-Unet: A self-supervised learning framework for biomedical image segmentation using Barlow Twins with U-Net modelscited by 12
- 2023Localized Region Contrast for Enhancing Self-Supervised Learning in Medical Image Segmentationcited by 3
Built on by
Citing papers per year: 2025: 4; 2026: 19.
23 papers.
Sort:
By area:
- 2026BrainDINO: A Brain MRI Foundation Model for Generalizable Clinical Representation Learningcited by 4
- 2026SegMoTE: Token-Level Mixture of Experts for Medical Image Segmentationcited by 2
- 2025InvCoSS: Inversion-driven Continual Self-supervised Learning in Medical Multi-modal Image Pre-trainingcited by 1
- 2026MeDUET: Disentangled Unified Pretraining for 3D Medical Image Synthesis and Analysiscited by 1
- 2026Exploiting Completeness Perception with Diffusion Transformer for Unified 3D MRI Synthesiscited by 1
- 2026Does YOLO Really Need to See Every Training Image in Every Epoch?cited by 1
- 2026Turning Generators into Retrievers: Unlocking MLLMs for Natural Language-Guided Geo-Localizationcited by 1
- 2026GeoSAE: Geometric Prior-Guided Layer-Wise Sparse Autoencoder Annotation of Brain MRI Foundation Modelscited by 1
- 2026BrainFIBRE: A Foundation Model via Information Decomposition for Brain Microstructurecited by 1
- 2025MedFoundationHub: A Lightweight and Secure Toolkit for Deploying Medical Vision Language Foundation Modelscited by 0
- 2025MRN: Harnessing 2D Vision Foundation Models for Diagnosing Parkinson's Disease with Limited 3D MR Datacited by 0
- 2025Johnson-Lindenstrauss Lemma Guided Network for Efficient 3D Medical Segmentationcited by 0
11 more
- 2026Any-to-All MRI Synthesis: A Unified Foundation Model for Nasopharyngeal Carcinoma and Its Downstream Applicationscited by 0
- 2026Toward Clinically Ready Foundation Models in Medical Image Analysis: Adaptation Mechanisms and Deployment Trade-offscited by 0
- 2026JDCNet: Confidence-Gated Privileged-Modality Distillation for Cost-Preserving X-ray Inferencecited by 0
- 2026Knowledge Transfer Scaling Laws for 3D Medical Imagingcited by 0
- 2026BrainAnytime: Anatomy-Aware Cross-Modal Pretraining for Brain Image Analysis with Arbitrary Modality Availabilitycited by 0
- 2026Beyond Instance-Level Self-Supervision in 3D Multi-Modal Medical Imagingcited by 0
- 2026Text as Illumination: Spatial Contrastive Retinex Learning for Language-guided Medical Image Segmentationcited by 0
- 2026Towards Grounded GI Endoscopy VQA via Multi-Task Learning on Small VLMscited by 0
- 2026BrainNorm: A Foundation Model that knows Normal via Semantic Atlas Pretrainingcited by 0
- 2026Reduce, Then Encode: Multiscale Volumetric Reduction for 2D Foundation Models in Brain MRIcited by 0
- 2026Where to Look Matters: Rethinking Sub-Volume Sampling in 3D Medical Self-supervised Learningcited by 0
- 2026Where to Look Matters: Rethinking Sub-Volume Sampling in 3D Medical Self-supervised Learning9 Oct 2026
- 2026Reduce, Then Encode: Multiscale Volumetric Reduction for 2D Foundation Models in Brain MRI28 Sep 2026
- 2026BrainNorm: A Foundation Model that knows Normal via Semantic Atlas Pretraining18 Aug 2026
- 2026Towards Grounded GI Endoscopy VQA via Multi-Task Learning on Small VLMs29 Jul 2026
- 2026BrainFIBRE: A Foundation Model via Information Decomposition for Brain Microstructure1 Jul 2026
- 2026Text as Illumination: Spatial Contrastive Retinex Learning for Language-guided Medical Image Segmentation26 Jun 2026
- 2026Beyond Instance-Level Self-Supervision in 3D Multi-Modal Medical Imaging14 May 2026
- 2026BrainAnytime: Anatomy-Aware Cross-Modal Pretraining for Brain Image Analysis with Arbitrary Modality Availability13 May 2026
- 2026Knowledge Transfer Scaling Laws for 3D Medical Imaging7 May 2026
- 2026GeoSAE: Geometric Prior-Guided Layer-Wise Sparse Autoencoder Annotation of Brain MRI Foundation Models3 May 2026
- 2026BrainDINO: A Brain MRI Foundation Model for Generalizable Clinical Representation Learning30 Apr 2026
- 2026Turning Generators into Retrievers: Unlocking MLLMs for Natural Language-Guided Geo-Localization12 Apr 2026
11 more
- 2026JDCNet: Confidence-Gated Privileged-Modality Distillation for Cost-Preserving X-ray Inference31 Mar 2026
- 2026Does YOLO Really Need to See Every Training Image in Every Epoch?18 Mar 2026
- 2026Toward Clinically Ready Foundation Models in Medical Image Analysis: Adaptation Mechanisms and Deployment Trade-offs15 Mar 2026
- 2026SegMoTE: Token-Level Mixture of Experts for Medical Image Segmentation22 Feb 2026
- 2026Exploiting Completeness Perception with Diffusion Transformer for Unified 3D MRI Synthesis20 Feb 2026
- 2026MeDUET: Disentangled Unified Pretraining for 3D Medical Image Synthesis and Analysis19 Feb 2026
- 2026Any-to-All MRI Synthesis: A Unified Foundation Model for Nasopharyngeal Carcinoma and Its Downstream Applications9 Feb 2026
- 2025InvCoSS: Inversion-driven Continual Self-supervised Learning in Medical Multi-modal Image Pre-training22 Dec 2025
- 2025Johnson-Lindenstrauss Lemma Guided Network for Efficient 3D Medical Segmentation26 Sep 2025
- 2025MRN: Harnessing 2D Vision Foundation Models for Diagnosing Parkinson's Disease with Limited 3D MR Data22 Sep 2025
- 2025MedFoundationHub: A Lightweight and Secure Toolkit for Deploying Medical Vision Language Foundation Models28 Aug 2025
- 2026BrainDINO: A Brain MRI Foundation Model for Generalizable Clinical Representation Learningcited by 4
- 2025InvCoSS: Inversion-driven Continual Self-supervised Learning in Medical Multi-modal Image Pre-trainingcited by 1
- 2026Does YOLO Really Need to See Every Training Image in Every Epoch?cited by 1
- 2026Turning Generators into Retrievers: Unlocking MLLMs for Natural Language-Guided Geo-Localizationcited by 1
- 2026BrainFIBRE: A Foundation Model via Information Decomposition for Brain Microstructurecited by 1
- 2025MRN: Harnessing 2D Vision Foundation Models for Diagnosing Parkinson's Disease with Limited 3D MR Datacited by 0
- 2025Johnson-Lindenstrauss Lemma Guided Network for Efficient 3D Medical Segmentationcited by 0
- 2026Any-to-All MRI Synthesis: A Unified Foundation Model for Nasopharyngeal Carcinoma and Its Downstream Applicationscited by 0
- 2026Toward Clinically Ready Foundation Models in Medical Image Analysis: Adaptation Mechanisms and Deployment Trade-offscited by 0
- 2026Knowledge Transfer Scaling Laws for 3D Medical Imagingcited by 0
- 2026BrainAnytime: Anatomy-Aware Cross-Modal Pretraining for Brain Image Analysis with Arbitrary Modality Availabilitycited by 0
- 2026Beyond Instance-Level Self-Supervision in 3D Multi-Modal Medical Imagingcited by 0
12 most cited of 17 All 17 (JSON)
- 2026Where to Look Matters: Rethinking Sub-Volume Sampling in 3D Medical Self-supervised Learning9 Oct 2026
- 2026Reduce, Then Encode: Multiscale Volumetric Reduction for 2D Foundation Models in Brain MRI28 Sep 2026
- 2026BrainNorm: A Foundation Model that knows Normal via Semantic Atlas Pretraining18 Aug 2026
- 2026Towards Grounded GI Endoscopy VQA via Multi-Task Learning on Small VLMs29 Jul 2026
- 2026BrainFIBRE: A Foundation Model via Information Decomposition for Brain Microstructure1 Jul 2026
- 2026Text as Illumination: Spatial Contrastive Retinex Learning for Language-guided Medical Image Segmentation26 Jun 2026
- 2026Beyond Instance-Level Self-Supervision in 3D Multi-Modal Medical Imaging14 May 2026
- 2026BrainAnytime: Anatomy-Aware Cross-Modal Pretraining for Brain Image Analysis with Arbitrary Modality Availability13 May 2026
- 2026Knowledge Transfer Scaling Laws for 3D Medical Imaging7 May 2026
- 2026BrainDINO: A Brain MRI Foundation Model for Generalizable Clinical Representation Learning30 Apr 2026
- 2026Turning Generators into Retrievers: Unlocking MLLMs for Natural Language-Guided Geo-Localization12 Apr 2026
- 2026Does YOLO Really Need to See Every Training Image in Every Epoch?18 Mar 2026
12 newest of 17 All 17 (JSON)