Embrace the Gap: VAEs Perform Independent Mechanism Analysis
Not on the map. Why?
Abstract (arXiv)
Variational autoencoders (VAEs) are a popular framework for modeling complex data distributions; they can be efficiently trained via variational inference by maximizing the evidence lower bound (ELBO), at the expense of a gap to the exact (log-)marginal likelihood. While VAEs are commonly used for representation learning, it is unclear why ELBO maximization would yield useful representations, since unregularized maximum likelihood estimation cannot invert the data-generating process. Yet, VAEs often succeed at this task. We seek to elucidate this apparent paradox by studying nonlinear VAEs in the limit of near-deterministic decoders. We first prove that, in this regime, the optimal encoder approximately inverts the decoder -- a commonly used but unproven conjecture -- which we refer to as em self-consistency. Leveraging self-consistency, we show that the ELBO converges to a regularized log-likelihood. This allows VAEs to perform what has recently been termed independent mechanism analysis (IMA): it adds an inductive bias towards decoders with column-orthogonal Jacobians, which helps recovering the true latent factors. The gap between ELBO and log-likelihood is therefore welcome, since it bears unanticipated benefits for nonlinear representation learning. In experiments on synthetic and image data, we show that VAEs uncover the true latent factors when the data generating process satisfies the IMA assumption.
Key facts. Cited by 28 papers in the map (data through 7 Oct 2026). Builds on 33 of its 81 references that are in the map. First posted on arXiv 6 Jun 2022.
Builds on
33 of 81 references.
References · 33
- 2013Auto-Encoding Variational Bayescited by 3,980
- 2015Variational Inference with Normalizing Flowscited by 2,161
- 2019Normalizing Flows for Probabilistic Modeling and Inferencecited by 1,315
- 2019An Introduction to Variational Autoencoderscited by 997
- 2018Challenging Common Assumptions in the Unsupervised Learning of Disentangled Representationscited by 929
- 2018Disentangling by Factorisingcited by 614
- 2019Variational Autoencoders and Nonlinear ICA: A Unifying Frameworkcited by 494
- 2016Tutorial on Variational Autoencoderscited by 404
- 2018Understanding disentangling in β-VAEcited by 332
- 2019On Mutual Information Maximization for Representation Learningcited by 315
- 2018Nonlinear ICA Using Auxiliary Variables and Generalized Contrastive Learningcited by 278
- 2016Unsupervised Feature Extraction by Time-Contrastive Learning and Nonlinear ICAcited by 270
21 more
- 2017Variational Inference of Disentangled Latent Concepts from Unlabeled Observationscited by 240
- 2020Weakly-Supervised Disentanglement Without Compromisescited by 237
- 2021Contrastive Learning Inverts the Data Generating Processcited by 220
- 2019Diagnosing and Enhancing VAE Modelscited by 192
- 2019From Variational to Deterministic Autoencoderscited by 131
- 2020Towards Nonlinear Disentanglement in Natural Data with Temporal Sparse Codingcited by 121
- 2019Don't Blame the ELBO! A Linear VAE Perspective on Posterior Collapsecited by 120
- 2022On the Pitfalls of Heteroscedastic Uncertainty Estimation with Probabilistic Neural Networkscited by 119
- 2021Independent mechanism analysis, a new concept?cited by 96
- 2019The Incomplete Rosetta Stone Problem: Identifiability Results for Multi-View Nonlinear ICAcited by 86
- 2018Variational Autoencoders Pursue PCA Directions (by Accident)cited by 84
- 2020Hidden Markov Nonlinear ICA: Unsupervised Learning from Nonstationary Time Seriescited by 76
- 2020SurVAE Flows: Surjections to Bridge the Gap between VAEs and Flowscited by 71
- 2020Simple and Effective VAE Training with Calibrated Decoderscited by 57
- 2019The Usual Suspects? Reassessing Blame for VAE Posterior Collapsecited by 52
- 2021Rectangular Flows for Manifold Learningcited by 49
- 2020On Implicit Regularization in β-VAEscited by 34
- 2018Amortized Inference Regularizationcited by 30
- 2020Regularized Autoencoders via Relaxed Injective Probability Flowcited by 23
- 2020Relative gradient optimization of the Jacobian term in unsupervised deep learningcited by 16
- 2020Quantitative Understanding of VAE as a Non-linearly Scaled Isometric Embeddingcited by 7
Built on by
Citing papers per year: 2022: 2; 2023: 8; 2024: 5; 2025: 7; 2026: 6.
28 papers.
Sort:
By area:
- 2023Compositional Generalization from First Principlescited by 62
- 2023Additive Decoders for Latent Variables Identification and Cartesian-Product Extrapolationcited by 56
- 2022Function Classes for Identifiable Nonlinear Independent Component Analysiscited by 53
- 2023High Fidelity Image Counterfactuals with Probabilistic Causal Modelscited by 53
- 2022Causal Representation Learning for Instantaneous and Temporal Effects in Interactive Systemscited by 50
- 2023Provably Learning Object-Centric Representationscited by 45
- 2023BISCUIT: Causal Representation Learning from Binary Interactionscited by 38
- 2023From Identifiable Causal Representations to Controllable Counterfactual Generation: A Survey on Causal Generative Modelingcited by 21
- 2024Identifiable Causal Representation Learning: Unsupervised, Multi-View, and Multi-Environmentcited by 12
- 2025Position: An Empirically Grounded Identifiability Theory Will Accelerate Self-Supervised Learning Researchcited by 9
- 2023Deep Backtracking Counterfactuals for Causally Compliant Explanationscited by 8
- 2023Independent Mechanism Analysis and the Manifold Hypothesiscited by 7
16 more
- 2025Robustness of Nonlinear Representation Learningcited by 7
- 2025Geometry-Preserving Encoder/Decoder in Latent Generative Modelscited by 6
- 2024Causal Representation Learning in Temporal Data via Single-Parent Decodingcited by 5
- 2025From Isolation to Entanglement: When Do Interpretability Methods Identify and Disentangle Known Concepts?cited by 5
- 2025Mechanistic Independence: A Principle for Identifiable Disentangled Representationscited by 3
- 2025Spatial Deconfounder: Interference-Aware Deconfounding for Spatial Causal Inferencecited by 3
- 2024Analyzing Generative Models by Manifold Entropic Metricscited by 2
- 2024Bayesian Unsupervised Disentanglement of Anatomy and Geometry for Deep Groupwise Image Registrationcited by 1
- 2025Intervening to Learn and Compose Causally Disentangled Representationscited by 1
- 2026Multi-Domain Empirical Bayes for Linearly-Mixed Causal Representationscited by 1
- 2026Content-Style Identification via Differential Independencecited by 1
- 2024Disentanglement as Identifiable Pushforward Factorisationcited by 0
- 2026From Core to Detail: Unsupervised Disentanglement with Entropy-Ordered Flowscited by 0
- 2026Disentanglement Beyond Generative Models with Riemannian ICAcited by 0
- 2026Unsupervised Disentanglement Without Compromises : How Functional Orthogonality Enforces Identifiabilitycited by 0
- 2026Generative Bayesian Filtering for State Estimationcited by 0
- 2026Generative Bayesian Filtering for State Estimation9 Jul 2026
- 2026Unsupervised Disentanglement Without Compromises : How Functional Orthogonality Enforces Identifiability19 Jun 2026
- 2026Disentanglement Beyond Generative Models with Riemannian ICA21 May 2026
- 2026Content-Style Identification via Differential Independence18 May 2026
- 2026Multi-Domain Empirical Bayes for Linearly-Mixed Causal Representations19 Mar 2026
- 2026From Core to Detail: Unsupervised Disentanglement with Entropy-Ordered Flows6 Feb 2026
- 2025From Isolation to Entanglement: When Do Interpretability Methods Identify and Disentangle Known Concepts?17 Dec 2025
- 2025Spatial Deconfounder: Interference-Aware Deconfounding for Spatial Causal Inference9 Oct 2025
- 2025Mechanistic Independence: A Principle for Identifiable Disentangled Representations26 Sep 2025
- 2025Intervening to Learn and Compose Causally Disentangled Representations7 Jul 2025
- 2025Position: An Empirically Grounded Identifiability Theory Will Accelerate Self-Supervised Learning Research17 Apr 2025
- 2025Robustness of Nonlinear Representation Learning19 Mar 2025
16 more
- 2025Geometry-Preserving Encoder/Decoder in Latent Generative Models16 Jan 2025
- 2024Disentanglement as Identifiable Pushforward Factorisation29 Oct 2024
- 2024Analyzing Generative Models by Manifold Entropic Metrics25 Oct 2024
- 2024Causal Representation Learning in Temporal Data via Single-Parent Decoding9 Oct 2024
- 2024Identifiable Causal Representation Learning: Unsupervised, Multi-View, and Multi-Environment19 Jun 2024
- 2024Bayesian Unsupervised Disentanglement of Anatomy and Geometry for Deep Groupwise Image Registration4 Jan 2024
- 2023Independent Mechanism Analysis and the Manifold Hypothesis20 Dec 2023
- 2023From Identifiable Causal Representations to Controllable Counterfactual Generation: A Survey on Causal Generative Modeling17 Oct 2023
- 2023Deep Backtracking Counterfactuals for Causally Compliant Explanations11 Oct 2023
- 2023Compositional Generalization from First Principles10 Jul 2023
- 2023Additive Decoders for Latent Variables Identification and Cartesian-Product Extrapolation5 Jul 2023
- 2023High Fidelity Image Counterfactuals with Probabilistic Causal Models27 Jun 2023
- 2023BISCUIT: Causal Representation Learning from Binary Interactions16 Jun 2023
- 2023Provably Learning Object-Centric Representations23 May 2023
- 2022Function Classes for Identifiable Nonlinear Independent Component Analysis12 Aug 2022
- 2022Causal Representation Learning for Instantaneous and Temporal Effects in Interactive Systems13 Jun 2022
- 2023Compositional Generalization from First Principlescited by 62
- 2023Additive Decoders for Latent Variables Identification and Cartesian-Product Extrapolationcited by 56
- 2022Function Classes for Identifiable Nonlinear Independent Component Analysiscited by 53
- 2023High Fidelity Image Counterfactuals with Probabilistic Causal Modelscited by 53
- 2022Causal Representation Learning for Instantaneous and Temporal Effects in Interactive Systemscited by 50
- 2023Provably Learning Object-Centric Representationscited by 45
- 2023BISCUIT: Causal Representation Learning from Binary Interactionscited by 38
- 2023From Identifiable Causal Representations to Controllable Counterfactual Generation: A Survey on Causal Generative Modelingcited by 21
- 2024Identifiable Causal Representation Learning: Unsupervised, Multi-View, and Multi-Environmentcited by 12
- 2025Position: An Empirically Grounded Identifiability Theory Will Accelerate Self-Supervised Learning Researchcited by 9
- 2023Deep Backtracking Counterfactuals for Causally Compliant Explanationscited by 8
- 2023Independent Mechanism Analysis and the Manifold Hypothesiscited by 7
12 most cited of 27 All 27 (JSON)
- 2026Generative Bayesian Filtering for State Estimation9 Jul 2026
- 2026Unsupervised Disentanglement Without Compromises : How Functional Orthogonality Enforces Identifiability19 Jun 2026
- 2026Disentanglement Beyond Generative Models with Riemannian ICA21 May 2026
- 2026Content-Style Identification via Differential Independence18 May 2026
- 2026Multi-Domain Empirical Bayes for Linearly-Mixed Causal Representations19 Mar 2026
- 2026From Core to Detail: Unsupervised Disentanglement with Entropy-Ordered Flows6 Feb 2026
- 2025From Isolation to Entanglement: When Do Interpretability Methods Identify and Disentangle Known Concepts?17 Dec 2025
- 2025Spatial Deconfounder: Interference-Aware Deconfounding for Spatial Causal Inference9 Oct 2025
- 2025Mechanistic Independence: A Principle for Identifiable Disentangled Representations26 Sep 2025
- 2025Intervening to Learn and Compose Causally Disentangled Representations7 Jul 2025
- 2025Position: An Empirically Grounded Identifiability Theory Will Accelerate Self-Supervised Learning Research17 Apr 2025
- 2025Robustness of Nonlinear Representation Learning19 Mar 2025
12 newest of 27 All 27 (JSON)
Similar, not cited
Close in wording, no citation either way
- 2025A Frequentist Statistical Introduction to Variational Inference, Autoencoders, and Diffusion Models
- 2025CoVAE: Consistency Training of Variational Autoencoders
- 2023A Note on Generalization in Variational Autoencoders: How Effective Is Synthetic Data & Overparameterization?
- 2025Generalization in VAE and Diffusion Models: A Unified Information-Theoretic Analysis
- 2025Sparse Autoencoders, Again?
- 2023Variational Diffusion Auto-encoder: Latent Space Extraction from Pre-trained Diffusion Models
- 2023Variational excess risk bound for general state space models
- 2021Diffusion Priors In Variational Autoencoders