Propagation Kernels
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Abstract (arXiv)
We introduce propagation kernels, a general graph-kernel framework for efficiently measuring the similarity of structured data. Propagation kernels are based on monitoring how information spreads through a set of given graphs. They leverage early-stage distributions from propagation schemes such as random walks to capture structural information encoded in node labels, attributes, and edge information. This has two benefits. First, off-the-shelf propagation schemes can be used to naturally construct kernels for many graph types, including labeled, partially labeled, unlabeled, directed, and attributed graphs. Second, by leveraging existing efficient and informative propagation schemes, propagation kernels can be considerably faster than state-of-the-art approaches without sacrificing predictive performance. We will also show that if the graphs at hand have a regular structure, for instance when modeling image or video data, one can exploit this regularity to scale the kernel computation to large databases of graphs with thousands of nodes. We support our contributions by exhaustive experiments on a number of real-world graphs from a variety of application domains.
Key facts. Cited by 88 papers in the map (data through 14 Oct 2026). First posted on arXiv 13 Oct 2014.
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Citing papers per year: 2021: 16; 2022: 12; 2023: 16; 2024: 21; 2025: 13; 2026: 10.
88 papers.
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- 2021Weisfeiler and Lehman Go Topological: Message Passing Simplicial Networkscited by 221
- 2021Weisfeiler and Lehman Go Cellular: CW Networkscited by 218
- 2021Equivariant Subgraph Aggregation Networkscited by 154
- 2021Nested Graph Neural Networkscited by 137
- 2021Deep Graph-level Anomaly Detection by Glocal Knowledge Distillationcited by 67
- 2022KerGNNs: Interpretable Graph Neural Networks with Graph Kernelscited by 50
- 2022GOOD-D: On Unsupervised Graph Out-Of-Distribution Detectioncited by 47
- 2023CoCo: A Coupled Contrastive Framework for Unsupervised Domain Adaptive Graph Classificationcited by 46
- 2022Raising the Bar in Graph-level Anomaly Detectioncited by 45
- 2023Towards Self-Interpretable Graph-Level Anomaly Detectioncited by 41
- 2021Online Graph Dictionary Learningcited by 37
- 2022Cell Attention Networkscited by 35
38 more
- 2023Probabilistically Rewired Message-Passing Neural Networkscited by 26
- 2021A New Perspective on the Effects of Spectrum in Graph Neural Networkscited by 24
- 2022Improving Graph Neural Networks with Learnable Propagation Operatorscited by 19
- 2024Unifying Unsupervised Graph-Level Anomaly Detection and Out-of-Distribution Detection: A Benchmarkcited by 18
- 2024GOODAT: Towards Test-time Graph Out-of-Distribution Detectioncited by 17
- 2023Graph-level Anomaly Detection via Hierarchical Memory Networkscited by 16
- 2023A Gromov--Wasserstein Geometric View of Spectrum-Preserving Graph Coarseningcited by 15
- 2023Higher-order Graph Convolutional Network with Flower-Petals Laplacians on Simplicial Complexescited by 15
- 2024Probabilistic Graph Rewiring via Virtual Nodescited by 15
- 2023CIN++: Enhancing Topological Message Passingcited by 14
- 2023Better with Less: A Data-Active Perspective on Pre-Training Graph Neural Networkscited by 14
- 2024Rethinking Reconstruction-based Graph-Level Anomaly Detection: Limitations and a Simple Remedycited by 13
- 2024Can Graph Neural Networks Learn Language with Extremely Weak Text Supervision?cited by 13
- 2023Weisfeiler and Lehman Go Paths: Learning Topological Features via Path Complexescited by 11
- 2024CVTGAD: Simplified Transformer with Cross-View Attention for Unsupervised Graph-level Anomaly Detectioncited by 10
- 2022Graph Anomaly Detection with Unsupervised GNNscited by 8
- 2023Graph Neural Networks based Log Anomaly Detection and Explanationcited by 8
- 2024Hypergraph-enhanced Dual Semi-supervised Graph Classificationcited by 8
- 2024Gaussian process regression with Sliced Wasserstein Weisfeiler-Lehman graph kernelscited by 7
- 2025Graph Data Selection for Domain Adaptation: A Model-Free Approachcited by 7
- 2023State of the Art and Potentialities of Graph-level Learningcited by 6
- 2021Fast Topological Clustering with Wasserstein Distancecited by 5
- 2022Gradual Weisfeiler-Leman: Slow and Steady Wins the Racecited by 5
- 2024Representation Learning for Frequent Subgraph Miningcited by 5
- 2024HC-GLAD: Dual Hyperbolic Contrastive Learning for Unsupervised Graph-Level Anomaly Detectioncited by 5
- 2021Computing Graph Descriptors on Edge Streamscited by 4
- 2021Fast Attributed Graph Embedding via Density of Statescited by 4
- 2022Incorporating Heterophily into Graph Neural Networks for Graph Classificationcited by 4
- 2023Towards Better Graph Representation Learning with Parameterized Decomposition & Filteringcited by 4
- 2023DeSCo: Towards Generalizable and Scalable Deep Subgraph Countingcited by 4
- 2021Edge but not Least: Cross-View Graph Poolingcited by 3
- 2023Equivariant Matrix Function Neural Networkscited by 3
- 2024IGNN-Solver: A Graph Neural Solver for Implicit Graph Neural Networkscited by 3
- 2025Structural Entropy Guided Unsupervised Graph Out-Of-Distribution Detectioncited by 3
- 2025On the Relationship Between Robustness and Expressivity of Graph Neural Networkscited by 3
- 2026Graph Smoothing for Enhanced Local Geometry Learning in Point Cloud Analysiscited by 3
- 2022Soft-mask: Adaptive Substructure Extractions for Graph Neural Networkscited by 2
- 2024Harnessing Collective Structure Knowledge in Data Augmentation for Graph Neural Networkscited by 2
50 most cited of 88 All 88 (JSON)
- 2026A dictionary learning framework for graphs via filters and optimal transport5 Sep 2026
- 2026GLASS: Graph-Language Alignment with Spherical Scoring for Transferable Graph-Level Anomaly Detection4 Sep 2026
- 2026Bridging the Gap Between Hyperdimensional Computing and Kernel Methods via the Nystr"om Method7 Aug 2026
- 2026Structured Gaussian Processes for Uncertainty-Aware Classification of High-Dimensional, Small-Sampled Omics Data2 Jul 2026
- 2026k-Nearest Neighbors in Gromov--Wasserstein Space9 Jun 2026
- 2026Towards Feedback-to-Plan Decisions for Self-Evolving LLM Agents in CUDA Kernel Generation26 May 2026
- 2026Beyond Edge Deletion: A Comprehensive Approach to Counterfactual Explanation in Graph Neural Networks4 Mar 2026
- 2026From Subtle to Significant: Prompt-Driven Self-Improving Optimization in Test-Time Graph OOD Detection19 Feb 2026
- 2026Interpretable Graph-Level Anomaly Detection via Contrast with Normal Prototypes11 Feb 2026
- 2026Graph Smoothing for Enhanced Local Geometry Learning in Point Cloud Analysis16 Jan 2026
- 2025LGAN: An Efficient High-Order Graph Neural Network via the Line Graph Aggregation11 Dec 2025
- 2025Weisfeiler and Leman Go Gambling: Why Expressive Lottery Tickets Win4 Jun 2025
38 more
- 2025Learnable Kernel Density Estimation for Graphs and Its Application to Graph-Level Anomaly Detection27 May 2025
- 2025Graph Inverse Style Transfer for Counterfactual Explainability23 May 2025
- 2025Graph Data Selection for Domain Adaptation: A Model-Free Approach22 May 2025
- 2025Metric Graph Kernels via the Tropical Torelli Map17 May 2025
- 2025On the Relationship Between Robustness and Expressivity of Graph Neural Networks18 Apr 2025
- 2025Evaluating machine learning models for predicting pesticide toxicity to honey bees31 Mar 2025
- 2025GLADMamba: Unsupervised Graph-Level Anomaly Detection Powered by Selective State Space Model23 Mar 2025
- 2025ASD Classification on Dynamic Brain Connectome using Temporal Random Walk with Transformer-based Dynamic Network Embedding16 Mar 2025
- 2025Measuring Similarity in Causal Graphs: A Framework for Semantic and Structural Analysis14 Mar 2025
- 2025Structural Entropy Guided Unsupervised Graph Out-Of-Distribution Detection5 Mar 2025
- 2025Harnessing Feature Resonance under Arbitrary Target Alignment for Out-of-Distribution Node Detection22 Feb 2025
- 2024Energy Guided smoothness to improve Robustness in Graph Classification11 Dec 2024
- 2024Can Graph Neural Networks Learn Language with Extremely Weak Text Supervision?11 Dec 2024
- 2024Rethinking Reconstruction-based Graph-Level Anomaly Detection: Limitations and a Simple Remedy27 Oct 2024
- 2024IGNN-Solver: A Graph Neural Solver for Implicit Graph Neural Networks11 Oct 2024
- 2024Graph-Based Representation Learning of Neuronal Dynamics and Behavior1 Oct 2024
- 2024Range-aware Positional Encoding via High-order Pretraining: Theory and Practice27 Sep 2024
- 2024HC-GLAD: Dual Hyperbolic Contrastive Learning for Unsupervised Graph-Level Anomaly Detection2 Jul 2024
- 2024Core Knowledge Learning Framework for Graph Adaptation and Scalability Learning2 Jul 2024
- 2024FANFOLD: Graph Normalizing Flows-driven Asymmetric Network for Unsupervised Graph-Level Anomaly Detection29 Jun 2024
- 2024Unifying Unsupervised Graph-Level Anomaly Detection and Out-of-Distribution Detection: A Benchmark21 Jun 2024
- 2024Learning to Solve Multiresolution Matrix Factorization by Manifold Optimization and Evolutionary Metaheuristics1 Jun 2024
- 2024Probabilistic Graph Rewiring via Virtual Nodes27 May 2024
- 2024Harnessing Collective Structure Knowledge in Data Augmentation for Graph Neural Networks17 May 2024
- 2024Imbalanced Graph Classification with Multi-scale Oversampling Graph Neural Networks8 May 2024
- 2024Hypergraph-enhanced Dual Semi-supervised Graph Classification8 May 2024
- 2024CVTGAD: Simplified Transformer with Cross-View Attention for Unsupervised Graph-level Anomaly Detection3 May 2024
- 2024Identification of important nodes in the information propagation network based on the artificial intelligence method29 Feb 2024
- 2024Representation Learning for Frequent Subgraph Mining22 Feb 2024
- 2024Learning Attributed Graphlets: Predictive Graph Mining by Graphlets with Trainable Attribute10 Feb 2024
- 2024Gaussian process regression with Sliced Wasserstein Weisfeiler-Lehman graph kernels6 Feb 2024
- 2024GOODAT: Towards Test-time Graph Out-of-Distribution Detection10 Jan 2024
- 2023Better with Less: A Data-Active Perspective on Pre-Training Graph Neural Networks2 Nov 2023
- 2023Towards Self-Interpretable Graph-Level Anomaly Detection25 Oct 2023
- 2023Equivariant Matrix Function Neural Networks16 Oct 2023
- 2023Probabilistically Rewired Message-Passing Neural Networks3 Oct 2023
- 2023Exploiting Edge Features in Graphs with Fused Network Gromov-Wasserstein Distance28 Sep 2023
- 2023Higher-order Graph Convolutional Network with Flower-Petals Laplacians on Simplicial Complexes22 Sep 2023
50 newest of 88 All 88 (JSON)
- 2021Weisfeiler and Lehman Go Topological: Message Passing Simplicial Networkscited by 221
- 2021Weisfeiler and Lehman Go Cellular: CW Networkscited by 218
- 2021Equivariant Subgraph Aggregation Networkscited by 154
- 2021Nested Graph Neural Networkscited by 137
- 2022KerGNNs: Interpretable Graph Neural Networks with Graph Kernelscited by 50
- 2022GOOD-D: On Unsupervised Graph Out-Of-Distribution Detectioncited by 47
- 2023CoCo: A Coupled Contrastive Framework for Unsupervised Domain Adaptive Graph Classificationcited by 46
- 2022Raising the Bar in Graph-level Anomaly Detectioncited by 45
- 2023Towards Self-Interpretable Graph-Level Anomaly Detectioncited by 41
- 2021Online Graph Dictionary Learningcited by 37
- 2022Cell Attention Networkscited by 35
- 2023Probabilistically Rewired Message-Passing Neural Networkscited by 26
12 most cited of 85 All 85 (JSON)
- 2026A dictionary learning framework for graphs via filters and optimal transport5 Sep 2026
- 2026GLASS: Graph-Language Alignment with Spherical Scoring for Transferable Graph-Level Anomaly Detection4 Sep 2026
- 2026Bridging the Gap Between Hyperdimensional Computing and Kernel Methods via the Nystr"om Method7 Aug 2026
- 2026Structured Gaussian Processes for Uncertainty-Aware Classification of High-Dimensional, Small-Sampled Omics Data2 Jul 2026
- 2026k-Nearest Neighbors in Gromov--Wasserstein Space9 Jun 2026
- 2026Beyond Edge Deletion: A Comprehensive Approach to Counterfactual Explanation in Graph Neural Networks4 Mar 2026
- 2026From Subtle to Significant: Prompt-Driven Self-Improving Optimization in Test-Time Graph OOD Detection19 Feb 2026
- 2026Interpretable Graph-Level Anomaly Detection via Contrast with Normal Prototypes11 Feb 2026
- 2026Graph Smoothing for Enhanced Local Geometry Learning in Point Cloud Analysis16 Jan 2026
- 2025LGAN: An Efficient High-Order Graph Neural Network via the Line Graph Aggregation11 Dec 2025
- 2025Weisfeiler and Leman Go Gambling: Why Expressive Lottery Tickets Win4 Jun 2025
- 2025Learnable Kernel Density Estimation for Graphs and Its Application to Graph-Level Anomaly Detection27 May 2025
12 newest of 85 All 85 (JSON)