Universal Graph Transformer Self-Attention Networks
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Abstract (arXiv)
We introduce a transformer-based GNN model, named UGformer, to learn graph representations. In particular, we present two UGformer variants, wherein the first variant (publicized in September 2019) is to leverage the transformer on a set of sampled neighbors for each input node, while the second (publicized in May 2021) is to leverage the transformer on all input nodes. Experimental results demonstrate that the first UGformer variant achieves state-of-the-art accuracies on benchmark datasets for graph classification in both inductive setting and unsupervised transductive setting; and the second UGformer variant obtains state-of-the-art accuracies for inductive text classification. The code is available at: urlhttps://github.com/daiquocnguyen/Graph-Transformer.
Key facts. Cited by 41 papers in the map (data through 7 Oct 2026). First posted on arXiv 26 Sep 2019.
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Citing papers per year: 2021: 7; 2022: 7; 2023: 7; 2024: 10; 2025: 6; 2026: 4.
41 papers.
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- 2022Pure Transformers are Powerful Graph Learnerscited by 188
- 2022Transformer for Graphs: An Overview from Architecture Perspectivecited by 107
- 2024Graph Mamba: Towards Learning on Graphs with State Space Modelscited by 84
- 2023Energy Transformercited by 69
- 2024FedGTA: Topology-aware Averaging for Federated Graph Learningcited by 44
- 2021ReGVD: Revisiting Graph Neural Networks for Vulnerability Detectioncited by 32
- 2024Graph Transformers: A Surveycited by 32
- 2021Node Co-occurrence based Graph Neural Networks for Knowledge Graph Link Predictioncited by 12
- 2021Joint Graph Learning and Matching for Semantic Feature Correspondencecited by 8
- 2022PatchGT: Transformer over Non-trainable Clusters for Learning Graph Representationscited by 8
- 2023A Survey on Graph Classification and Link Prediction based on GNNcited by 8
- 2024A Survey on Structure-Preserving Graph Transformerscited by 7
29 more
- 2023Union Subgraph Neural Networkscited by 6
- 2024An Interpretable Ensemble of Graph and Language Models for Improving Search Relevance in E-Commercecited by 6
- 2023AGFormer: Efficient Graph Representation with Anchor-Graph Transformercited by 5
- 2022Cross-Skeleton Interaction Graph Aggregation Network for Representation Learning of Mouse Social Behaviourcited by 4
- 2021EGC2: Enhanced Graph Classification with Easy Graph Compressioncited by 3
- 2021Two-view Graph Neural Networks for Knowledge Graph Completioncited by 3
- 2022A Class-Aware Representation Refinement Framework for Graph Classificationcited by 3
- 2024Tensor-Fused Multi-View Graph Contrastive Learningcited by 3
- 2025HGCN(O): A Self-Tuning GCN HyperModel Toolkit for Outcome Prediction in Event-Sequence Datacited by 3
- 2024Saliency-Aware Regularized Graph Neural Networkcited by 2
- 2025Graph Inverse Style Transfer for Counterfactual Explainabilitycited by 2
- 2021AutoHEnsGNN: Winning Solution to AutoGraph Challenge for KDD Cup 2020cited by 1
- 2022Inducing Gaussian Process Networkscited by 1
- 2023A Graph Transformer-Driven Approach for Network Robustness Learningcited by 1
- 2023Multiscale Hodge Scattering Networks for Data Analysiscited by 1
- 2024Accelerating Flood Warnings by 10 Hours: The Power of River Network Topology in AI-enhanced Flood Forecastingcited by 1
- 2025KAA: Kolmogorov-Arnold Attention for Enhancing Attentive Graph Neural Networkscited by 1
- 2025Divergent Paths: Separating Homophilic and Heterophilic Learning for Enhanced Graph-level Representationscited by 1
- 2025Pattern-Based Graph Classification: Comparison of Quality Measures and Importance of Preprocessingcited by 1
- 2026Attention-based graph neural networks: a surveycited by 1
- 2026Context-aware Modality-Topology Co-Alignment for Multimodal Attributed Graphscited by 1
- 2021Quadratic GCN for Graph Classificationcited by 0
- 2022Predicting Topological Maps for Visual Navigation in Unexplored Environmentscited by 0
- 2023Structure-Sensitive Graph Dictionary Embedding for Graph Classificationcited by 0
- 2024Identifying Influential nodes in Brain Networks via Self-Supervised Graph-Transformercited by 0
- 2024NACNet: A Histology Context-aware Transformer Graph Convolution Network for Predicting Treatment Response to Neoadjuvant Chemotherapy in Triple Negative Breast Cancercited by 0
- 2025Attention Beyond Neighborhoods: Reviving Transformer for Graph Clusteringcited by 0
- 2026CTQWformer: A CTQW-based Transformer for Graph Classificationcited by 0
- 2026Controlled Dynamics Attractor Transformercited by 0
- 2026Controlled Dynamics Attractor Transformer13 Jun 2026
- 2026Context-aware Modality-Topology Co-Alignment for Multimodal Attributed Graphs12 Jun 2026
- 2026CTQWformer: A CTQW-based Transformer for Graph Classification10 May 2026
- 2026Attention-based graph neural networks: a survey9 May 2026
- 2025Attention Beyond Neighborhoods: Reviving Transformer for Graph Clustering18 Sep 2025
- 2025HGCN(O): A Self-Tuning GCN HyperModel Toolkit for Outcome Prediction in Event-Sequence Data30 Jul 2025
- 2025Pattern-Based Graph Classification: Comparison of Quality Measures and Importance of Preprocessing19 Jun 2025
- 2025Graph Inverse Style Transfer for Counterfactual Explainability23 May 2025
- 2025Divergent Paths: Separating Homophilic and Heterophilic Learning for Enhanced Graph-level Representations6 Apr 2025
- 2025KAA: Kolmogorov-Arnold Attention for Enhancing Attentive Graph Neural Networks23 Jan 2025
- 2024NACNet: A Histology Context-aware Transformer Graph Convolution Network for Predicting Treatment Response to Neoadjuvant Chemotherapy in Triple Negative Breast Cancer14 Nov 2024
- 2024Tensor-Fused Multi-View Graph Contrastive Learning20 Oct 2024
29 more
- 2024Accelerating Flood Warnings by 10 Hours: The Power of River Network Topology in AI-enhanced Flood Forecasting7 Oct 2024
- 2024Identifying Influential nodes in Brain Networks via Self-Supervised Graph-Transformer17 Sep 2024
- 2024Graph Transformers: A Survey13 Jul 2024
- 2024An Interpretable Ensemble of Graph and Language Models for Improving Search Relevance in E-Commerce1 Mar 2024
- 2024Graph Mamba: Towards Learning on Graphs with State Space Models13 Feb 2024
- 2024A Survey on Structure-Preserving Graph Transformers29 Jan 2024
- 2024FedGTA: Topology-aware Averaging for Federated Graph Learning22 Jan 2024
- 2024Saliency-Aware Regularized Graph Neural Network1 Jan 2024
- 2023Multiscale Hodge Scattering Networks for Data Analysis17 Nov 2023
- 2023A Survey on Graph Classification and Link Prediction based on GNN3 Jul 2023
- 2023Structure-Sensitive Graph Dictionary Embedding for Graph Classification18 Jun 2023
- 2023A Graph Transformer-Driven Approach for Network Robustness Learning12 Jun 2023
- 2023Union Subgraph Neural Networks25 May 2023
- 2023AGFormer: Efficient Graph Representation with Anchor-Graph Transformer12 May 2023
- 2023Energy Transformer14 Feb 2023
- 2022PatchGT: Transformer over Non-trainable Clusters for Learning Graph Representations26 Nov 2022
- 2022Predicting Topological Maps for Visual Navigation in Unexplored Environments23 Nov 2022
- 2022A Class-Aware Representation Refinement Framework for Graph Classification2 Sep 2022
- 2022Cross-Skeleton Interaction Graph Aggregation Network for Representation Learning of Mouse Social Behaviour7 Aug 2022
- 2022Pure Transformers are Powerful Graph Learners6 Jul 2022
- 2022Inducing Gaussian Process Networks21 Apr 2022
- 2022Transformer for Graphs: An Overview from Architecture Perspective17 Feb 2022
- 2021Two-view Graph Neural Networks for Knowledge Graph Completion16 Dec 2021
- 2021AutoHEnsGNN: Winning Solution to AutoGraph Challenge for KDD Cup 202025 Nov 2021
- 2021ReGVD: Revisiting Graph Neural Networks for Vulnerability Detection14 Oct 2021
- 2021Joint Graph Learning and Matching for Semantic Feature Correspondence1 Sep 2021
- 2021EGC2: Enhanced Graph Classification with Easy Graph Compression16 Jul 2021
- 2021Node Co-occurrence based Graph Neural Networks for Knowledge Graph Link Prediction15 Apr 2021
- 2021Quadratic GCN for Graph Classification14 Apr 2021
- 2022Pure Transformers are Powerful Graph Learnerscited by 188
- 2022Transformer for Graphs: An Overview from Architecture Perspectivecited by 107
- 2023Energy Transformercited by 69
- 2024FedGTA: Topology-aware Averaging for Federated Graph Learningcited by 44
- 2021ReGVD: Revisiting Graph Neural Networks for Vulnerability Detectioncited by 32
- 2024Graph Transformers: A Surveycited by 32
- 2021Node Co-occurrence based Graph Neural Networks for Knowledge Graph Link Predictioncited by 12
- 2021Joint Graph Learning and Matching for Semantic Feature Correspondencecited by 8
- 2022PatchGT: Transformer over Non-trainable Clusters for Learning Graph Representationscited by 8
- 2023A Survey on Graph Classification and Link Prediction based on GNNcited by 8
- 2024A Survey on Structure-Preserving Graph Transformerscited by 7
- 2023Union Subgraph Neural Networkscited by 6
12 most cited of 40 All 40 (JSON)
- 2026Controlled Dynamics Attractor Transformer13 Jun 2026
- 2026Context-aware Modality-Topology Co-Alignment for Multimodal Attributed Graphs12 Jun 2026
- 2026CTQWformer: A CTQW-based Transformer for Graph Classification10 May 2026
- 2026Attention-based graph neural networks: a survey9 May 2026
- 2025Attention Beyond Neighborhoods: Reviving Transformer for Graph Clustering18 Sep 2025
- 2025HGCN(O): A Self-Tuning GCN HyperModel Toolkit for Outcome Prediction in Event-Sequence Data30 Jul 2025
- 2025Pattern-Based Graph Classification: Comparison of Quality Measures and Importance of Preprocessing19 Jun 2025
- 2025Graph Inverse Style Transfer for Counterfactual Explainability23 May 2025
- 2025Divergent Paths: Separating Homophilic and Heterophilic Learning for Enhanced Graph-level Representations6 Apr 2025
- 2025KAA: Kolmogorov-Arnold Attention for Enhancing Attentive Graph Neural Networks23 Jan 2025
- 2024NACNet: A Histology Context-aware Transformer Graph Convolution Network for Predicting Treatment Response to Neoadjuvant Chemotherapy in Triple Negative Breast Cancer14 Nov 2024
- 2024Tensor-Fused Multi-View Graph Contrastive Learning20 Oct 2024
12 newest of 40 All 40 (JSON)