Interpolation-Prediction Networks for Irregularly Sampled Time Series
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Abstract (arXiv)
In this paper, we present a new deep learning architecture for addressing the problem of supervised learning with sparse and irregularly sampled multivariate time series. The architecture is based on the use of a semi-parametric interpolation network followed by the application of a prediction network. The interpolation network allows for information to be shared across multiple dimensions of a multivariate time series during the interpolation stage, while any standard deep learning model can be used for the prediction network. This work is motivated by the analysis of physiological time series data in electronic health records, which are sparse, irregularly sampled, and multivariate. We investigate the performance of this architecture on both classification and regression tasks, showing that our approach outperforms a range of baseline and recently proposed models.
Key facts. Cited by 89 papers in the map (data through 14 Oct 2026). First posted on arXiv 13 Sep 2019.
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Citing papers per year: 2021: 13; 2022: 12; 2023: 20; 2024: 17; 2025: 9; 2026: 18.
89 papers.
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- 2021Multi-Time Attention Networks for Irregularly Sampled Time Seriescited by 238
- 2022N-HiTS: Neural Hierarchical Interpolation for Time Series Forecastingcited by 146
- 2021Graph-Guided Network for Irregularly Sampled Multivariate Time Seriescited by 111
- 2021Self-Supervised Transformer for Sparse and Irregularly Sampled Multivariate Clinical Time-Seriescited by 96
- 2023Time Series as Images: Vision Transformer for Irregularly Sampled Time Seriescited by 79
- 2024FuseMoE: Mixture-of-Experts Transformers for Fleximodal Fusioncited by 68
- 2021Closed-form Continuous-time Neural Modelscited by 65
- 2023Asynchrony-Robust Collaborative Perception via Bird's Eye View Flowcited by 58
- 2024A Closer Look at AUROC and AUPRC under Class Imbalancecited by 57
- 2023Warpformer: A Multi-scale Modeling Approach for Irregular Clinical Time Seriescited by 55
- 2021Neural Point Process for Learning Spatiotemporal Event Dynamicscited by 42
- 2023ImDiffusion: Imputed Diffusion Models for Multivariate Time Series Anomaly Detectioncited by 40
38 more
- 2023Personalized Federated Learning under Mixture of Distributionscited by 37
- 2022Improving Medical Predictions by Irregular Multimodal Electronic Health Records Modelingcited by 33
- 2021Dynamic Gaussian Mixture based Deep Generative Model For Robust Forecasting on Sparse Multivariate Time Seriescited by 30
- 2024Universal Time-Series Representation Learning: A Surveycited by 30
- 2023Learning Missing Modal Electronic Health Records with Unified Multi-modal Data Embedding and Modality-Aware Attentioncited by 25
- 2021Variable-rate discrete representation learningcited by 24
- 2023Probabilistic Imputation for Time-series Classification with Missing Datacited by 22
- 2025HyperIMTS: Hypergraph Neural Network for Irregular Multivariate Time Series Forecastingcited by 15
- 2021TE-ESN: Time Encoding Echo State Network for Prediction Based on Irregularly Sampled Time Series Datacited by 10
- 2022Stop&Hop: Early Classification of Irregular Time Seriescited by 10
- 2024Unleashing The Power of Pre-Trained Language Models for Irregularly Sampled Time Seriescited by 10
- 2024TimeCHEAT: A Channel Harmony Strategy for Irregularly Sampled Multivariate Time Series Analysiscited by 10
- 2024SMART: Towards Pre-trained Missing-Aware Model for Patient Health Status Predictioncited by 8
- 2025ASTGI: Adaptive Spatio-Temporal Graph Interactions for Irregular Multivariate Time Series Forecastingcited by 8
- 2024EBES: Easy Benchmarking for Event Sequencescited by 7
- 2026GlucoFM: A Dual-Stream Foundation Model for Continuous Glucose Monitoringcited by 7
- 2022Tripletformer for Probabilistic Interpolation of Irregularly sampled Time Seriescited by 6
- 2023Revisiting the Encoding of Satellite Image Time Seriescited by 6
- 2024CTPD: Cross-Modal Temporal Pattern Discovery for Enhanced Multimodal Electronic Health Records Analysiscited by 6
- 2022DeepJoint: Robust Survival Modelling Under Clinical Presence Shiftcited by 5
- 2023Time-Parameterized Convolutional Neural Networks for Irregularly Sampled Time Seriescited by 5
- 2024EMIT- Event-Based Masked Auto Encoding for Irregular Time Seriescited by 5
- 2022What is Next when Sequential Prediction Meets Implicitly Hard Interaction?cited by 4
- 2022DCSF: Deep Convolutional Set Functions for Classification of Asynchronous Time Seriescited by 4
- 2022NIERT: Accurate Numerical Interpolation through Unifying Scattered Data Representations using Transformer Encodercited by 4
- 2024Irregularity-Informed Time Series Analysis: Adaptive Modelling of Spatial and Temporal Dynamicscited by 4
- 2024TEE4EHR: Transformer Event Encoder for Better Representation Learning in Electronic Health Recordscited by 3
- 2024Disentangling Imperfect: A Wavelet-Infused Multilevel Heterogeneous Network for Human Activity Recognition in Flawed Wearable Sensor Datacited by 3
- 2022Imputing Missing Observations with Time Sliced Synthetic Minority Oversampling Techniquecited by 2
- 2022Irregularly-Sampled Time Series Modeling with Spline Networkscited by 2
- 2023Finding Short Signals in Long Irregular Time Series with Continuous-Time Attention Policy Networkscited by 2
- 2023Tree Cross Attentioncited by 2
- 2023Compatible Transformer for Irregularly Sampled Multivariate Time Seriescited by 2
- 2023Know Thy Neighbors: A Graph Based Approach for Effective Sensor-Based Human Activity Recognition in Smart Homescited by 2
- 2024Imputation with Inter-Series Information from Prototypes for Irregular Sampled Time Seriescited by 2
- 2024Channel-Aware Throughput Maximization for Cooperative Data Fusion in CAVcited by 2
- 2025Bi-Axial Transformers: Addressing the Increasing Complexity of EHR Classificationcited by 2
- 2025Mind the Missing: Variable-Aware Representation Learning for Irregular EHR Time Series using Large Language Modelscited by 2
50 most cited of 89 All 89 (JSON)
- 2026Multimodal Prompt Learning with Irregular EHRs for Robust Monitoring of Critical Care Patients22 Aug 2026
- 2026Curriculum-Aware Interpolate-then-Refine: Learned Physiological Time-Series Imputation under Realistic Missingness21 Aug 2026
- 2026GARLIC: Graph Attention-based Relational Learning of Multivariate Time Series in Intensive Care11 Aug 2026
- 2026DoctorAgents: an agentic framework to iteratively refine AutoML pipeline for small clinical temporal data5 Aug 2026
- 2026MissHyper: Restoring Clinical Synchronicity in Missingness-Guided Hypergraph Forecasting24 Jul 2026
- 2026TRIAGE: Dialectical Reasoning for Explainable Risk Prediction on Irregularly Sampled Medical Time Series with LLMs8 Jun 2026
- 2026GlucoFM: A Dual-Stream Foundation Model for Continuous Glucose Monitoring29 May 2026
- 2026Faithful Embeddings of Irregular and Asynchronous Data for Online Log-NCDEs28 May 2026
- 2026QuITE: Query-Based Irregular Time Series Embedding27 May 2026
- 2026Latent Laplace Diffusion for Irregular Multivariate Time Series19 May 2026
- 2026MILM: Large Language Models for Multimodal Irregular Time Series with Informative Sampling13 May 2026
- 2026ReTAMamba: Reliability-Aware Temporal Aggregation with Mamba for Irregular Clinical Time Series Prediction11 May 2026
38 more
- 2026Transformer autoencoder with local attention for sparse and irregular time series with application on risk estimation9 May 2026
- 2026Deep Kernel Learning for Stratifying Glaucoma Trajectories1 May 2026
- 2026DBGL: Decay-aware Bipartite Graph Learning for Irregular Medical Time Series Classification12 Apr 2026
- 2026Learning Recursive Multi-Scale Representations for Irregular Multivariate Time Series Forecasting25 Feb 2026
- 2026A Statistical Approach for Modeling Irregular Multivariate Time Series with Missing Observations23 Feb 2026
- 2026Efficient Neural Controlled Differential Equations via Attentive Kernel Smoothing2 Feb 2026
- 2025FlowPath: Learning Data-Driven Manifolds with Invertible Flows for Robust Irregularly-sampled Time Series Classification13 Nov 2025
- 2025Graph Mixing Additive Networks28 Sep 2025
- 2025ASTGI: Adaptive Spatio-Temporal Graph Interactions for Irregular Multivariate Time Series Forecasting27 Sep 2025
- 2025Mind the Missing: Variable-Aware Representation Learning for Irregular EHR Time Series using Large Language Models26 Sep 2025
- 2025Bi-Axial Transformers: Addressing the Increasing Complexity of EHR Classification17 Aug 2025
- 2025HyperIMTS: Hypergraph Neural Network for Irregular Multivariate Time Series Forecasting23 May 2025
- 2025STaRFormer: Semi-Supervised Task-Informed Representation Learning via Dynamic Attention-Based Regional Masking for Sequential Data14 Apr 2025
- 2025Temporal Dynamic Embedding for Irregularly Sampled Time Series8 Apr 2025
- 2025Collaborative Imputation of Urban Time Series through Cross-city Meta-learning20 Jan 2025
- 2024TimeCHEAT: A Channel Harmony Strategy for Irregularly Sampled Multivariate Time Series Analysis17 Dec 2024
- 2024WaveGNN: Integrating Graph Neural Networks and Transformers for Decay-Aware Classification of Irregular Clinical Time-Series14 Dec 2024
- 2024MuSiCNet: A Gradual Coarse-to-Fine Framework for Irregularly Sampled Multivariate Time Series Analysis2 Dec 2024
- 2024CTPD: Cross-Modal Temporal Pattern Discovery for Enhanced Multimodal Electronic Health Records Analysis1 Nov 2024
- 2024Irregularity-Informed Time Series Analysis: Adaptive Modelling of Spatial and Temporal Dynamics16 Oct 2024
- 2024Channel-Aware Throughput Maximization for Cooperative Data Fusion in CAV6 Oct 2024
- 2024EBES: Easy Benchmarking for Event Sequences4 Oct 2024
- 2024EMIT- Event-Based Masked Auto Encoding for Irregular Time Series25 Sep 2024
- 2024Unleashing The Power of Pre-Trained Language Models for Irregularly Sampled Time Series12 Aug 2024
- 2024Predicting Solar Heat Production to Optimize Renewable Energy Usage16 May 2024
- 2024SMART: Towards Pre-trained Missing-Aware Model for Patient Health Status Prediction15 May 2024
- 2024TEE4EHR: Transformer Event Encoder for Better Representation Learning in Electronic Health Records9 Feb 2024
- 2024FuseMoE: Mixture-of-Experts Transformers for Fleximodal Fusion5 Feb 2024
- 2024Disentangling Imperfect: A Wavelet-Infused Multilevel Heterogeneous Network for Human Activity Recognition in Flawed Wearable Sensor Data26 Jan 2024
- 2024Imputation with Inter-Series Information from Prototypes for Irregular Sampled Time Series14 Jan 2024
- 2024A Closer Look at AUROC and AUPRC under Class Imbalance11 Jan 2024
- 2024Universal Time-Series Representation Learning: A Survey8 Jan 2024
- 2023Know Thy Neighbors: A Graph Based Approach for Effective Sensor-Based Human Activity Recognition in Smart Homes16 Nov 2023
- 2023Approaching adverse event detection utilizing transformers on clinical time-series15 Nov 2023
- 2023Two-Stage Aggregation with Dynamic Local Attention for Irregular Time Series13 Nov 2023
- 2023Self Attention with Temporal Prior: Can We Learn More from Arrow of Time?29 Oct 2023
- 2023Compatible Transformer for Irregularly Sampled Multivariate Time Series17 Oct 2023
- 2023Tree Cross Attention29 Sep 2023
50 newest of 89 All 89 (JSON)
- 2021Multi-Time Attention Networks for Irregularly Sampled Time Seriescited by 238
- 2022N-HiTS: Neural Hierarchical Interpolation for Time Series Forecastingcited by 146
- 2021Graph-Guided Network for Irregularly Sampled Multivariate Time Seriescited by 111
- 2021Self-Supervised Transformer for Sparse and Irregularly Sampled Multivariate Clinical Time-Seriescited by 96
- 2023Time Series as Images: Vision Transformer for Irregularly Sampled Time Seriescited by 79
- 2021Closed-form Continuous-time Neural Modelscited by 65
- 2023Asynchrony-Robust Collaborative Perception via Bird's Eye View Flowcited by 58
- 2024A Closer Look at AUROC and AUPRC under Class Imbalancecited by 57
- 2023Warpformer: A Multi-scale Modeling Approach for Irregular Clinical Time Seriescited by 55
- 2021Neural Point Process for Learning Spatiotemporal Event Dynamicscited by 42
- 2023Personalized Federated Learning under Mixture of Distributionscited by 37
- 2022Improving Medical Predictions by Irregular Multimodal Electronic Health Records Modelingcited by 33
12 most cited of 84 All 84 (JSON)
- 2026Multimodal Prompt Learning with Irregular EHRs for Robust Monitoring of Critical Care Patients22 Aug 2026
- 2026Curriculum-Aware Interpolate-then-Refine: Learned Physiological Time-Series Imputation under Realistic Missingness21 Aug 2026
- 2026GARLIC: Graph Attention-based Relational Learning of Multivariate Time Series in Intensive Care11 Aug 2026
- 2026MissHyper: Restoring Clinical Synchronicity in Missingness-Guided Hypergraph Forecasting24 Jul 2026
- 2026GlucoFM: A Dual-Stream Foundation Model for Continuous Glucose Monitoring29 May 2026
- 2026Faithful Embeddings of Irregular and Asynchronous Data for Online Log-NCDEs28 May 2026
- 2026QuITE: Query-Based Irregular Time Series Embedding27 May 2026
- 2026Latent Laplace Diffusion for Irregular Multivariate Time Series19 May 2026
- 2026MILM: Large Language Models for Multimodal Irregular Time Series with Informative Sampling13 May 2026
- 2026Transformer autoencoder with local attention for sparse and irregular time series with application on risk estimation9 May 2026
- 2026Deep Kernel Learning for Stratifying Glaucoma Trajectories1 May 2026
- 2026DBGL: Decay-aware Bipartite Graph Learning for Irregular Medical Time Series Classification12 Apr 2026
12 newest of 84 All 84 (JSON)