No New-Net
Not on the map. Why?
Abstract (arXiv)
In this paper we demonstrate the effectiveness of a well trained U-Net in the context of the BraTS 2018 challenge. This endeavour is particularly interesting given that researchers are currently besting each other with architectural modifications that are intended to improve the segmentation performance. We instead focus on the training process arguing that a well trained U-Net is hard to beat. Our baseline U-Net, which has only minor modifications and is trained with a large patch size and a Dice loss function indeed achieved competitive Dice scores on the BraTS2018 validation data. By incorporating additional measures such as region based training, additional training data, a simple postprocessing technique and a combination of loss functions, we obtain Dice scores of 77.88, 87.81 and 80.62, and Hausdorff Distances (95th percentile) of 2.90, 6.03 and 5.08 for the enhancing tumor, whole tumor and tumor core, respectively on the test data. This setup achieved rank two in BraTS2018, with more than 60 teams participating in the challenge.
Key facts. Cited by 61 papers in the map (data through 14 Oct 2026). First posted on arXiv 27 Sep 2018.
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Citing papers per year: 2021: 28; 2022: 12; 2023: 5; 2024: 5; 2025: 6; 2026: 5.
61 papers.
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- 2021Knowledge distillation from multi-modal to mono-modal segmentation networkscited by 68
- 2021Convolution-Free Medical Image Segmentation using Transformerscited by 49
- 2021QU-BraTS: MICCAI BraTS 2020 Challenge on Quantifying Uncertainty in Brain Tumor Segmentation - Analysis of Ranking Scores and Benchmarking Resultscited by 28
- 2023MEGANet: Multi-Scale Edge-Guided Attention Network for Weak Boundary Polyp Segmentationcited by 28
- 2021Are we using appropriate segmentation metrics? Identifying correlates of human expert perception for CNN training beyond rolling the DICE coefficientcited by 26
- 2024A review of deep learning-based information fusion techniques for multimodal medical image classificationcited by 25
- 2022Cross-Modality Deep Feature Learning for Brain Tumor Segmentationcited by 22
- 2022Medical Image Segmentation on MRI Images with Missing Modalities: A Reviewcited by 18
- 2024QUBIQ: Uncertainty Quantification for Biomedical Image Segmentation Challengecited by 13
- 2022Factorizer: A Scalable Interpretable Approach to Context Modeling for Medical Image Segmentationcited by 12
- 2021Belief function-based semi-supervised learning for brain tumor segmentationcited by 11
- 2021On the relationship between calibrated predictors and unbiased volume estimationcited by 11
38 more
- 2022Point-Unet: A Context-aware Point-based Neural Network for Volumetric Segmentationcited by 11
- 2022Rethinking Generalization: The Impact of Annotation Style on Medical Image Segmentationcited by 10
- 2021Meningioma segmentation in T1-weighted MRI leveraging global context and attention mechanismscited by 9
- 2022Theoretical analysis and experimental validation of volume bias of soft Dice optimized segmentation maps in the context of inherent uncertaintycited by 6
- 2021HAD-Net: A Hierarchical Adversarial Knowledge Distillation Network for Improved Enhanced Tumour Segmentation Without Post-Contrast Imagescited by 5
- 2021A Data-Adaptive Loss Function for Incomplete Data and Incremental Learning in Semantic Image Segmentationcited by 5
- 2022HNF-Netv2 for Brain Tumor Segmentation using multi-modal MR Imagingcited by 5
- 2022The Dice loss in the context of missing or empty labels: Introducing Phi and εcited by 5
- 2021Brain Tumor Segmentation and Survival Prediction using Automatic Hard mining in 3D CNN Architecturecited by 4
- 2024ISLES'24: Final Infarct Prediction with Multimodal Imaging and Clinical Data. Where Do We Stand?cited by 4
- 2021BEDS: Bagging ensemble deep segmentation for nucleus segmentation with testing stage stain augmentationcited by 3
- 2021Acquisition-invariant brain MRI segmentation with informative uncertaintiescited by 3
- 2021Deep and Statistical Learning in Biomedical Imaging: State of the Art in 3D MRI Brain Tumor Segmentationcited by 2
- 2021Invertible Residual Network with Regularization for Effective Medical Image Segmentationcited by 2
- 2021Artificial Intelligence in Tumor Subregion Analysis Based on Medical Imaging: A Reviewcited by 2
- 2021CateNorm: Categorical Normalization for Robust Medical Image Segmentationcited by 2
- 2021Brain tumour segmentation using a triplanar ensemble of U-Netscited by 2
- 2021Cohort Bias Adaptation in Aggregated Datasets for Lesion Segmentationcited by 2
- 2021View-Consistent Metal Segmentation in the Projection Domain for Metal Artifact Reduction in CBCT -- An Investigation of Potential Improvementcited by 2
- 2024Integrating Edges into U-Net Models with Explainable Activation Maps for Brain Tumor Segmentation using MR Imagescited by 2
- 2021Multi-stage Deep Layer Aggregation for Brain Tumor Segmentationcited by 1
- 2021A Survey and Analysis on Automated Glioma Brain Tumor Segmentation and Overall Patient Survival Predictioncited by 1
- 2021Spatially Dependent U-Nets: Highly Accurate Architectures for Medical Imaging Segmentationcited by 1
- 2021Dilated Inception U-Net (DIU-Net) for Brain Tumor Segmentationcited by 1
- 2021Systematic Clinical Evaluation of A Deep Learning Method for Medical Image Segmentation: Radiosurgery Applicationcited by 1
- 2021Group Shift Pointwise Convolution for Volumetric Medical Image Segmentationcited by 1
- 2022Super-Resolution Based Patch-Free 3D Image Segmentation with High-Frequency Guidancecited by 1
- 2023Acute ischemic stroke lesion segmentation in non-contrast CT images using 3D convolutional neural networkscited by 1
- 2024Iterative Learning for Joint Image Denoising and Motion Artifact Correction of 3D Brain MRIcited by 1
- 2025Prior-Guided Residual Diffusion: Calibrated and Efficient Medical Image Segmentationcited by 1
- 2026Beyond Random Sampling: Distribution-Aware Alignment for Semi-Supervised Medical Image Segmentationcited by 1
- 2021Catalyzing Clinical Diagnostic Pipelines Through Volumetric Medical Image Segmentation Using Deep Neural Networks: Past, Present, & Futurecited by 0
- 2021Experimenting with Knowledge Distillation techniques for performing Brain Tumor Segmentationcited by 0
- 2021The role of MRI physics in brain segmentation CNNs: achieving acquisition invariance and instructive uncertaintiescited by 0
- 2022Brain MRI study for glioma segmentation using convolutional neural networks and original post-processing techniques with low computational demandcited by 0
- 2022Solving Sample-Level Out-of-Distribution Detection on 3D Medical Imagescited by 0
- 2022Towards fully automated deep-learning-based brain tumor segmentation: is brain extraction still necessary?cited by 0
- 2023Medical Image Analysis using Deep Relational Learningcited by 0
50 most cited of 61 All 61 (JSON)
- 2026Beyond Random Sampling: Distribution-Aware Alignment for Semi-Supervised Medical Image Segmentation5 Jul 2026
- 2026MS-DKC: A Dataset Knowledge Card Framework for Designing and Adapting Medical Image Segmentation Models4 Jun 2026
- 2026DALight-3D: A Lightweight 3D U-Net for Brain Tumor Segmentation from Multi-Modal MRI6 May 2026
- 2026Fairboard: a quantitative framework for equity assessment of healthcare models30 Mar 2026
- 2026Attention-gated U-Net model for semantic segmentation of brain tumors and feature extraction for survival prognosis14 Feb 2026
- 2025MTMed3D: A Multi-Task Transformer-Based Model for 3D Medical Imaging15 Nov 2025
- 2025On-the-Fly Data Augmentation for Brain Tumor Segmentation29 Sep 2025
- 2025Prior-Guided Residual Diffusion: Calibrated and Efficient Medical Image Segmentation1 Sep 2025
- 2025Modality-AGnostic Image Cascade (MAGIC) for Multi-Modality Cardiac Substructure Segmentation12 Jun 2025
- 2025Efficient 3D Brain Tumor Segmentation with Axial-Coronal-Sagittal Embedding31 May 2025
- 2025Mutual Evidential Deep Learning for Medical Image Segmentation18 May 2025
- 2024ISLES'24: Final Infarct Prediction with Multimodal Imaging and Clinical Data. Where Do We Stand?20 Aug 2024
38 more
- 2024A review of deep learning-based information fusion techniques for multimodal medical image classification23 Apr 2024
- 2024QUBIQ: Uncertainty Quantification for Biomedical Image Segmentation Challenge19 Mar 2024
- 2024Iterative Learning for Joint Image Denoising and Motion Artifact Correction of 3D Brain MRI13 Mar 2024
- 2024Integrating Edges into U-Net Models with Explainable Activation Maps for Brain Tumor Segmentation using MR Images2 Jan 2024
- 2023AMLP: Adjustable Masking Lesion Patches for Self-Supervised Medical Image Segmentation8 Sep 2023
- 2023MEGANet: Multi-Scale Edge-Guided Attention Network for Weak Boundary Polyp Segmentation6 Sep 2023
- 2023Active Inference-Based Optimization of Discriminative Neural Network Classifiers4 Jun 2023
- 2023Medical Image Analysis using Deep Relational Learning28 Mar 2023
- 2023Acute ischemic stroke lesion segmentation in non-contrast CT images using 3D convolutional neural networks17 Jan 2023
- 2022Towards fully automated deep-learning-based brain tumor segmentation: is brain extraction still necessary?14 Dec 2022
- 2022Solving Sample-Level Out-of-Distribution Detection on 3D Medical Images13 Dec 2022
- 2022Theoretical analysis and experimental validation of volume bias of soft Dice optimized segmentation maps in the context of inherent uncertainty8 Nov 2022
- 2022Rethinking Generalization: The Impact of Annotation Style on Medical Image Segmentation31 Oct 2022
- 2022Super-Resolution Based Patch-Free 3D Image Segmentation with High-Frequency Guidance26 Oct 2022
- 2022The Dice loss in the context of missing or empty labels: Introducing Phi and ε19 Jul 2022
- 2022Brain MRI study for glioma segmentation using convolutional neural networks and original post-processing techniques with low computational demand15 Jul 2022
- 2022Point-Unet: A Context-aware Point-based Neural Network for Volumetric Segmentation16 Mar 2022
- 2022Medical Image Segmentation on MRI Images with Missing Modalities: A Review11 Mar 2022
- 2022Factorizer: A Scalable Interpretable Approach to Context Modeling for Medical Image Segmentation24 Feb 2022
- 2022HNF-Netv2 for Brain Tumor Segmentation using multi-modal MR Imaging10 Feb 2022
- 2022Cross-Modality Deep Feature Learning for Brain Tumor Segmentation7 Jan 2022
- 2021On the relationship between calibrated predictors and unbiased volume estimation23 Dec 2021
- 2021QU-BraTS: MICCAI BraTS 2020 Challenge on Quantifying Uncertainty in Brain Tumor Segmentation - Analysis of Ranking Scores and Benchmarking Results19 Dec 2021
- 2021View-Consistent Metal Segmentation in the Projection Domain for Metal Artifact Reduction in CBCT -- An Investigation of Potential Improvement3 Dec 2021
- 2021Acquisition-invariant brain MRI segmentation with informative uncertainties7 Nov 2021
- 2021The role of MRI physics in brain segmentation CNNs: achieving acquisition invariance and instructive uncertainties4 Nov 2021
- 2021Group Shift Pointwise Convolution for Volumetric Medical Image Segmentation26 Sep 2021
- 2021Systematic Clinical Evaluation of A Deep Learning Method for Medical Image Segmentation: Radiosurgery Application21 Aug 2021
- 2021Dilated Inception U-Net (DIU-Net) for Brain Tumor Segmentation15 Aug 2021
- 2021Cohort Bias Adaptation in Aggregated Datasets for Lesion Segmentation2 Aug 2021
- 2021Knowledge distillation from multi-modal to mono-modal segmentation networks17 Jun 2021
- 2021Experimenting with Knowledge Distillation techniques for performing Brain Tumor Segmentation24 May 2021
- 2021Brain tumour segmentation using a triplanar ensemble of U-Nets24 May 2021
- 2021A Data-Adaptive Loss Function for Incomplete Data and Incremental Learning in Semantic Image Segmentation22 Apr 2021
- 2021HAD-Net: A Hierarchical Adversarial Knowledge Distillation Network for Improved Enhanced Tumour Segmentation Without Post-Contrast Images30 Mar 2021
- 2021CateNorm: Categorical Normalization for Robust Medical Image Segmentation29 Mar 2021
- 2021Catalyzing Clinical Diagnostic Pipelines Through Volumetric Medical Image Segmentation Using Deep Neural Networks: Past, Present, & Future27 Mar 2021
- 2021Artificial Intelligence in Tumor Subregion Analysis Based on Medical Imaging: A Review25 Mar 2021
50 newest of 61 All 61 (JSON)
- 2021Knowledge distillation from multi-modal to mono-modal segmentation networkscited by 68
- 2021HAD-Net: A Hierarchical Adversarial Knowledge Distillation Network for Improved Enhanced Tumour Segmentation Without Post-Contrast Imagescited by 5
- 2021Experimenting with Knowledge Distillation techniques for performing Brain Tumor Segmentationcited by 0
- 2021Knowledge distillation from multi-modal to mono-modal segmentation networks17 Jun 2021
- 2021Experimenting with Knowledge Distillation techniques for performing Brain Tumor Segmentation24 May 2021
- 2021HAD-Net: A Hierarchical Adversarial Knowledge Distillation Network for Improved Enhanced Tumour Segmentation Without Post-Contrast Images30 Mar 2021
- 2021Convolution-Free Medical Image Segmentation using Transformerscited by 49
- 2021QU-BraTS: MICCAI BraTS 2020 Challenge on Quantifying Uncertainty in Brain Tumor Segmentation - Analysis of Ranking Scores and Benchmarking Resultscited by 28
- 2023MEGANet: Multi-Scale Edge-Guided Attention Network for Weak Boundary Polyp Segmentationcited by 28
- 2021Are we using appropriate segmentation metrics? Identifying correlates of human expert perception for CNN training beyond rolling the DICE coefficientcited by 26
- 2024A review of deep learning-based information fusion techniques for multimodal medical image classificationcited by 25
- 2022Cross-Modality Deep Feature Learning for Brain Tumor Segmentationcited by 22
- 2022Medical Image Segmentation on MRI Images with Missing Modalities: A Reviewcited by 18
- 2024QUBIQ: Uncertainty Quantification for Biomedical Image Segmentation Challengecited by 13
- 2022Factorizer: A Scalable Interpretable Approach to Context Modeling for Medical Image Segmentationcited by 12
- 2021Belief function-based semi-supervised learning for brain tumor segmentationcited by 11
- 2021On the relationship between calibrated predictors and unbiased volume estimationcited by 11
- 2022Point-Unet: A Context-aware Point-based Neural Network for Volumetric Segmentationcited by 11
12 most cited of 58 All 58 (JSON)
- 2026Beyond Random Sampling: Distribution-Aware Alignment for Semi-Supervised Medical Image Segmentation5 Jul 2026
- 2026MS-DKC: A Dataset Knowledge Card Framework for Designing and Adapting Medical Image Segmentation Models4 Jun 2026
- 2026DALight-3D: A Lightweight 3D U-Net for Brain Tumor Segmentation from Multi-Modal MRI6 May 2026
- 2026Fairboard: a quantitative framework for equity assessment of healthcare models30 Mar 2026
- 2026Attention-gated U-Net model for semantic segmentation of brain tumors and feature extraction for survival prognosis14 Feb 2026
- 2025MTMed3D: A Multi-Task Transformer-Based Model for 3D Medical Imaging15 Nov 2025
- 2025On-the-Fly Data Augmentation for Brain Tumor Segmentation29 Sep 2025
- 2025Prior-Guided Residual Diffusion: Calibrated and Efficient Medical Image Segmentation1 Sep 2025
- 2025Modality-AGnostic Image Cascade (MAGIC) for Multi-Modality Cardiac Substructure Segmentation12 Jun 2025
- 2025Efficient 3D Brain Tumor Segmentation with Axial-Coronal-Sagittal Embedding31 May 2025
- 2025Mutual Evidential Deep Learning for Medical Image Segmentation18 May 2025
- 2024ISLES'24: Final Infarct Prediction with Multimodal Imaging and Clinical Data. Where Do We Stand?20 Aug 2024
12 newest of 58 All 58 (JSON)