Neural Encoding and Decoding with Deep Learning for Dynamic Natural Vision
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Abstract (arXiv)
Convolutional neural network (CNN) driven by image recognition has been shown to be able to explain cortical responses to static pictures at ventral-stream areas. Here, we further showed that such CNN could reliably predict and decode functional magnetic resonance imaging data from humans watching natural movies, despite its lack of any mechanism to account for temporal dynamics or feedback processing. Using separate data, encoding and decoding models were developed and evaluated for describing the bi-directional relationships be-tween the CNN and the brain. Through the encoding models, the CNN-predicted areas covered not only the ventral stream, but also the dorsal stream, albe-it to a lesser degree; single-voxel response was visualized as the specific pixel pattern that drove the response, revealing the distinct representation of individual cortical location; cortical activation was synthesized from natural images with high-throughput to map category representation, con-trast, and selectivity. Through the decoding models, fMRI signals were directly decoded to estimate the feature representations in both visual and semantic spaces, for direct visual reconstruction and seman-tic categorization, respectively. These results cor-roborate, generalize, and extend previous findings, and highlight the value of using deep learning, as an all-in-one model of the visual cortex, to understand and decode natural vision.
Key facts. Cited by 58 papers in the map (data through 7 Oct 2026). First posted on arXiv 11 Aug 2016.
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Citing papers per year: 2021: 3; 2022: 3; 2023: 12; 2024: 12; 2025: 17; 2026: 11.
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- 2023Cinematic Mindscapes: High-quality Video Reconstruction from Brain Activitycited by 69
- 2023BrainVis: Exploring the Bridge between Brain and Visual Signals via Image Reconstructioncited by 30
- 2024NeuroClips: Towards High-fidelity and Smooth fMRI-to-Video Reconstructioncited by 24
- 2023Improving visual image reconstruction from human brain activity using latent diffusion models via multiple decoded inputscited by 23
- 2024Neuro-3D: Towards 3D Visual Decoding from EEG Signalscited by 23
- 2022A Penny for Your (visual) Thoughts: Self-Supervised Reconstruction of Natural Movies from Brain Activitycited by 19
- 2025Neural Encoding and Decoding at Scalecited by 17
- 2023Brain-Conditional Multimodal Synthesis: A Survey and Taxonomycited by 15
- 2024The Wisdom of a Crowd of Brains: A Universal Brain Encodercited by 15
- 2023Efficient deep data assimilation with sparse observations and time-varying sensorscited by 14
- 2024NeuroBind: Towards Unified Multimodal Representations for Neural Signalscited by 13
- 2022Personalized visual encoding model construction with small datacited by 12
38 more
- 2023A Dual-Stream Neural Network Explains the Functional Segregation of Dorsal and Ventral Visual Pathways in Human Brainscited by 12
- 2026A foundation model of vision, audition, and language for in-silico neurosciencecited by 12
- 2023MinD-3D: Reconstruct High-quality 3D objects in Human Braincited by 11
- 2025CineBrain: A Large-Scale Multi-Modal Brain Dataset During Naturalistic Audiovisual Narrative Processingcited by 11
- 2021Predictive coding feedback results in perceived illusory contours in a recurrent neural networkcited by 10
- 2024NeuroCine: Decoding Vivid Video Sequences from Human Brain Activtiescited by 10
- 2024Animate Your Thoughts: Decoupled Reconstruction of Dynamic Natural Vision from Slow Brain Activitycited by 10
- 2023A Framework for Interpretability in Machine Learning for Medical Imagingcited by 9
- 2023Memory Encoding Modelcited by 7
- 2024MinD-3D++: Advancing fMRI-Based 3D Reconstruction with High-Quality Textured Mesh Generation and a Comprehensive Datasetcited by 6
- 2025A Survey of fMRI to Image Reconstructioncited by 6
- 2025A Survey on fMRI-based Brain Decoding for Reconstructing Multimodal Stimulicited by 6
- 2021More Than Meets the Eye: Self-Supervised Depth Reconstruction From Brain Activitycited by 5
- 2024Reanimating Images using Neural Representations of Dynamic Stimulicited by 5
- 2025Neurons: Emulating the Human Visual Cortex Improves Fidelity and Interpretability in fMRI-to-Video Reconstructioncited by 5
- 2025Multimodal Recurrent Ensembles for Predicting Brain Responses to Naturalistic Movies (Algonauts 2025)cited by 5
- 2023Applicability of scaling laws to vision encoding modelscited by 4
- 2025Meta-Learning an In-Context Transformer Model of Human Higher Visual Cortexcited by 4
- 2024Comprehensive Review of EEG-to-Output Research: Decoding Neural Signals into Images, Videos, and Audiocited by 3
- 2026Deep Models, Shallow Alignment: Uncovering the Granularity Mismatch in Neural Decodingcited by 3
- 2023A Learnable Counter-condition Analysis Framework for Functional Connectivity-based Neurological Disorder Diagnosiscited by 2
- 2024Modeling the Human Visual System: Comparative Insights from Response-Optimized and Task-Optimized Vision Models, Language Models, and different Readout Mechanismscited by 2
- 2024Artificial Intelligence for Biomedical Video Generationcited by 2
- 2025Multigranular Evaluation for Brain Visual Decodingcited by 2
- 2025A Cognitive Process-Inspired Architecture for Subject-Agnostic Brain Visual Decodingcited by 2
- 2023Retinotopy Inspired Brain Encoding Model and the All-for-One Training Recipecited by 1
- 2024Scaling up ridge regression for brain encoding in a massive individual fMRI datasetcited by 1
- 2025Talking to the brain: Using Large Language Models as Proxies to Model Brain Semantic Representationcited by 1
- 2025DecoFuse: Decomposing and Fusing the "What", "Where", and "How" for Brain-Inspired fMRI-to-Video Decodingcited by 1
- 2025MindShot: Multi-Shot Video Reconstruction from fMRI with LLM Decodingcited by 1
- 2025Rest2Visual: Predicting Visually Evoked fMRI from Resting-State Scanscited by 1
- 2021Using Deep Learning for Visual Decoding and Reconstruction from Brain Activity: A Reviewcited by 0
- 2022Integrating Statistical and Machine Learning Approaches to Identify Receptive Field Structure in Neural Populationscited by 0
- 2025Deep Neural Encoder-Decoder Model to Relate fMRI Brain Activity with Naturalistic Stimulicited by 0
- 2025Better audio representations are more brain-like: linking model-brain alignment with performance in downstream auditory taskscited by 0
- 2025Transformers for Multimodal Brain State Decoding: Integrating Functional Magnetic Resonance Imaging Data and Medical Metadatacited by 0
- 2025NeuroSketch: A Practical Design Recipe for Neural Decodingcited by 0
- 2026Achieving Fine-grained Cross-modal Understanding through Brain-inspired Hierarchical Representation Learningcited by 0
50 most cited of 58 All 58 (JSON)
- 2026Do Vision Model See Like the Brain? A Comparison Across EEG Encoding Model22 Sep 2026
- 2026Coarse-to-fine Hierarchical Architecture with Sequential Mamba for Brain Reconstruction3 Jun 2026
- 2026NeurIPS: Neuro-anatomical Inductive Priors for Sphere-based Brain Decoding24 May 2026
- 2026Bridging Brain and Semantics: A Hierarchical Framework for Semantically Enhanced fMRI-to-Video Reconstruction14 May 2026
- 2026A foundation model of vision, audition, and language for in-silico neuroscience5 May 2026
- 2026NeuroFlow: Toward Unified Visual Encoding and Decoding from Neural Activity10 Apr 2026
- 2026Graph Attention Network-Based Detection of Autism Spectrum Disorder27 Mar 2026
- 2026SemVideo: Reconstructs What You Watch from Brain Activity via Hierarchical Semantic Guidance25 Feb 2026
- 2026We Should Separate Memorization from Copyright9 Feb 2026
- 2026Deep Models, Shallow Alignment: Uncovering the Granularity Mismatch in Neural Decoding29 Jan 2026
- 2026Achieving Fine-grained Cross-modal Understanding through Brain-inspired Hierarchical Representation Learning4 Jan 2026
- 2025NeuroSketch: A Practical Design Recipe for Neural Decoding10 Dec 2025
38 more
- 2025Transformers for Multimodal Brain State Decoding: Integrating Functional Magnetic Resonance Imaging Data and Medical Metadata9 Dec 2025
- 2025Better audio representations are more brain-like: linking model-brain alignment with performance in downstream auditory tasks20 Nov 2025
- 2025A Cognitive Process-Inspired Architecture for Subject-Agnostic Brain Visual Decoding4 Nov 2025
- 2025Rest2Visual: Predicting Visually Evoked fMRI from Resting-State Scans17 Sep 2025
- 2025MindShot: Multi-Shot Video Reconstruction from fMRI with LLM Decoding4 Aug 2025
- 2025Multimodal Recurrent Ensembles for Predicting Brain Responses to Naturalistic Movies (Algonauts 2025)23 Jul 2025
- 2025Deep Neural Encoder-Decoder Model to Relate fMRI Brain Activity with Naturalistic Stimuli16 Jul 2025
- 2025Multigranular Evaluation for Brain Visual Decoding10 Jul 2025
- 2025Meta-Learning an In-Context Transformer Model of Human Higher Visual Cortex21 May 2025
- 2025Neural Encoding and Decoding at Scale11 Apr 2025
- 2025DecoFuse: Decomposing and Fusing the "What", "Where", and "How" for Brain-Inspired fMRI-to-Video Decoding1 Apr 2025
- 2025A Survey on fMRI-based Brain Decoding for Reconstructing Multimodal Stimuli20 Mar 2025
- 2025Neurons: Emulating the Human Visual Cortex Improves Fidelity and Interpretability in fMRI-to-Video Reconstruction14 Mar 2025
- 2025CineBrain: A Large-Scale Multi-Modal Brain Dataset During Naturalistic Audiovisual Narrative Processing10 Mar 2025
- 2025Talking to the brain: Using Large Language Models as Proxies to Model Brain Semantic Representation26 Feb 2025
- 2025A Survey of fMRI to Image Reconstruction24 Feb 2025
- 2024Comprehensive Review of EEG-to-Output Research: Decoding Neural Signals into Images, Videos, and Audio28 Dec 2024
- 2024Neuro-3D: Towards 3D Visual Decoding from EEG Signals19 Nov 2024
- 2024Artificial Intelligence for Biomedical Video Generation12 Nov 2024
- 2024NeuroClips: Towards High-fidelity and Smooth fMRI-to-Video Reconstruction25 Oct 2024
- 2024Modeling the Human Visual System: Comparative Insights from Response-Optimized and Task-Optimized Vision Models, Language Models, and different Readout Mechanisms17 Oct 2024
- 2024MinD-3D++: Advancing fMRI-Based 3D Reconstruction with High-Quality Textured Mesh Generation and a Comprehensive Dataset17 Sep 2024
- 2024NeuroBind: Towards Unified Multimodal Representations for Neural Signals19 Jul 2024
- 2024The Wisdom of a Crowd of Brains: A Universal Brain Encoder18 Jun 2024
- 2024Reanimating Images using Neural Representations of Dynamic Stimuli4 Jun 2024
- 2024Animate Your Thoughts: Decoupled Reconstruction of Dynamic Natural Vision from Slow Brain Activity6 May 2024
- 2024Scaling up ridge regression for brain encoding in a massive individual fMRI dataset28 Mar 2024
- 2024NeuroCine: Decoding Vivid Video Sequences from Human Brain Activties2 Feb 2024
- 2023Brain-Conditional Multimodal Synthesis: A Survey and Taxonomy31 Dec 2023
- 2023BrainVis: Exploring the Bridge between Brain and Visual Signals via Image Reconstruction22 Dec 2023
- 2023MinD-3D: Reconstruct High-quality 3D objects in Human Brain12 Dec 2023
- 2023Efficient deep data assimilation with sparse observations and time-varying sensors24 Oct 2023
- 2023A Dual-Stream Neural Network Explains the Functional Segregation of Dorsal and Ventral Visual Pathways in Human Brains20 Oct 2023
- 2023A Learnable Counter-condition Analysis Framework for Functional Connectivity-based Neurological Disorder Diagnosis6 Oct 2023
- 2023A Framework for Interpretability in Machine Learning for Medical Imaging2 Oct 2023
- 2023Memory Encoding Model2 Aug 2023
- 2023Applicability of scaling laws to vision encoding models1 Aug 2023
- 2023Retinotopy Inspired Brain Encoding Model and the All-for-One Training Recipe26 Jul 2023
50 newest of 58 All 58 (JSON)
- 2024NeuroClips: Towards High-fidelity and Smooth fMRI-to-Video Reconstructioncited by 24
- 2023Improving visual image reconstruction from human brain activity using latent diffusion models via multiple decoded inputscited by 23
- 2024Reanimating Images using Neural Representations of Dynamic Stimulicited by 5
- 2024NeuroClips: Towards High-fidelity and Smooth fMRI-to-Video Reconstruction25 Oct 2024
- 2024Reanimating Images using Neural Representations of Dynamic Stimuli4 Jun 2024
- 2023Improving visual image reconstruction from human brain activity using latent diffusion models via multiple decoded inputs20 Jun 2023
- 2023Cinematic Mindscapes: High-quality Video Reconstruction from Brain Activitycited by 69
- 2023BrainVis: Exploring the Bridge between Brain and Visual Signals via Image Reconstructioncited by 30
- 2024Neuro-3D: Towards 3D Visual Decoding from EEG Signalscited by 23
- 2022A Penny for Your (visual) Thoughts: Self-Supervised Reconstruction of Natural Movies from Brain Activitycited by 19
- 2025Neural Encoding and Decoding at Scalecited by 17
- 2023Brain-Conditional Multimodal Synthesis: A Survey and Taxonomycited by 15
- 2024The Wisdom of a Crowd of Brains: A Universal Brain Encodercited by 15
- 2023Efficient deep data assimilation with sparse observations and time-varying sensorscited by 14
- 2024NeuroBind: Towards Unified Multimodal Representations for Neural Signalscited by 13
- 2022Personalized visual encoding model construction with small datacited by 12
- 2023A Dual-Stream Neural Network Explains the Functional Segregation of Dorsal and Ventral Visual Pathways in Human Brainscited by 12
- 2026A foundation model of vision, audition, and language for in-silico neurosciencecited by 12
12 most cited of 53 All 53 (JSON)
- 2026Do Vision Model See Like the Brain? A Comparison Across EEG Encoding Model22 Sep 2026
- 2026Bridging Brain and Semantics: A Hierarchical Framework for Semantically Enhanced fMRI-to-Video Reconstruction14 May 2026
- 2026A foundation model of vision, audition, and language for in-silico neuroscience5 May 2026
- 2026NeuroFlow: Toward Unified Visual Encoding and Decoding from Neural Activity10 Apr 2026
- 2026Graph Attention Network-Based Detection of Autism Spectrum Disorder27 Mar 2026
- 2026SemVideo: Reconstructs What You Watch from Brain Activity via Hierarchical Semantic Guidance25 Feb 2026
- 2026We Should Separate Memorization from Copyright9 Feb 2026
- 2026Deep Models, Shallow Alignment: Uncovering the Granularity Mismatch in Neural Decoding29 Jan 2026
- 2026Achieving Fine-grained Cross-modal Understanding through Brain-inspired Hierarchical Representation Learning4 Jan 2026
- 2025NeuroSketch: A Practical Design Recipe for Neural Decoding10 Dec 2025
- 2025Transformers for Multimodal Brain State Decoding: Integrating Functional Magnetic Resonance Imaging Data and Medical Metadata9 Dec 2025
- 2025Better audio representations are more brain-like: linking model-brain alignment with performance in downstream auditory tasks20 Nov 2025
12 newest of 53 All 53 (JSON)