Personalized visual encoding model construction with small data
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Abstract (arXiv)
Encoding models that predict brain response patterns to stimuli are one way to capture this relationship between variability in bottom-up neural systems and individual's behavior or pathological state. However, they generally need a large amount of training data to achieve optimal accuracy. Here, we propose and test an alternative personalized ensemble encoding model approach to utilize existing encoding models, to create encoding models for novel individuals with relatively little stimuli-response data. We show that these personalized ensemble encoding models trained with small amounts of data for a specific individual, i.e. ~300 image-response pairs, achieve accuracy not different from models trained on ~20,000 image-response pairs for the same individual. Importantly, the personalized ensemble encoding models preserve patterns of inter-individual variability in the image-response relationship. Additionally, we show the proposed approach is robust against domain shift by validating on a prospectively collected set of image-response data in novel individuals with a different scanner and experimental setup. Finally, we use our personalized ensemble encoding model within the recently developed NeuroGen framework to generate optimal stimuli designed to maximize specific regions' activations for a specific individual. We show that the inter-individual differences in face areas responses to images of animal vs human faces observed previously is replicated using NeuroGen with the ensemble encoding model. Our approach shows the potential to use previously collected, deeply sampled data to efficiently create accurate, personalized encoding models and, subsequently, personalized optimal synthetic images for new individuals scanned under different experimental conditions.
Key facts. Cited by 12 papers in the map (data through 7 Oct 2026). Builds on 14 of its 52 references that are in the map. First posted on arXiv 4 Feb 2022.
Builds on
14 of 52 references.
References · 14
- 2015Deep Residual Learning for Image Recognitioncited by 51,809
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- 2014Very Deep Convolutional Networks for Large-Scale Image Recognitioncited by 15,267
- 2014ImageNet Large Scale Visual Recognition Challengecited by 8,441
- 2018Large Scale GAN Training for High Fidelity Natural Image Synthesiscited by 2,609
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- 2015Return of Frustratingly Easy Domain Adaptationcited by 389
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- 2014Deep Neural Networks Reveal a Gradient in the Complexity of Neural Representations across the Brain's Ventral Visual Pathwaycited by 93
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- 2018Reconstructing Faces from fMRI Patterns using Deep Generative Neural Networkscited by 43
- 2021NeuroGen: activation optimized image synthesis for discovery neurosciencecited by 22
Built on by
Citing papers per year: 2023: 2; 2024: 2; 2025: 4; 2026: 4.
12 papers.
- 2024The Wisdom of a Crowd of Brains: A Universal Brain Encodercited by 15
- 2025MindSimulator: Exploring Brain Concept Localization via Synthetic FMRIcited by 15
- 2023A Framework for Interpretability in Machine Learning for Medical Imagingcited by 9
- 2025SynBrain: Enhancing Visual-to-fMRI Synthesis via Probabilistic Representation Learningcited by 9
- 2023Generate your neural signals from mine: individual-to-individual EEG converterscited by 3
- 2024Across-subject ensemble-learning alleviates the need for large samples for fMRI decodingcited by 3
- 2025A Multimodal Sequence-to-Sequence Model for Cross-Subject Prediction of Brain Responses to Naturalistic Stimulicited by 2
- 2026How Hyper-Datafication Impacts the Sustainability Costs in Frontier AIcited by 1
- 2025Beyond Grid-Locked Voxels: Neural Response Functions for Continuous Brain Encodingcited by 0
- 2026NeuroFlow: Toward Unified Visual Encoding and Decoding from Neural Activitycited by 0
- 2026ViBE: Visual-to-M/EEG Brain Encoding via Spatio-Temporal VAE and Distribution-Aligned Projectioncited by 0
- 2026BrainJanus: A Unified Model for Understanding and Generation across Brain, Vision, and Languagecited by 0
- 2026BrainJanus: A Unified Model for Understanding and Generation across Brain, Vision, and Language29 Jun 2026
- 2026ViBE: Visual-to-M/EEG Brain Encoding via Spatio-Temporal VAE and Distribution-Aligned Projection29 Apr 2026
- 2026NeuroFlow: Toward Unified Visual Encoding and Decoding from Neural Activity10 Apr 2026
- 2026How Hyper-Datafication Impacts the Sustainability Costs in Frontier AI20 Jan 2026
- 2025Beyond Grid-Locked Voxels: Neural Response Functions for Continuous Brain Encoding7 Oct 2025
- 2025SynBrain: Enhancing Visual-to-fMRI Synthesis via Probabilistic Representation Learning14 Aug 2025
- 2025A Multimodal Sequence-to-Sequence Model for Cross-Subject Prediction of Brain Responses to Naturalistic Stimuli24 Jul 2025
- 2025MindSimulator: Exploring Brain Concept Localization via Synthetic FMRI4 Mar 2025
- 2024Across-subject ensemble-learning alleviates the need for large samples for fMRI decoding9 Jul 2024
- 2024The Wisdom of a Crowd of Brains: A Universal Brain Encoder18 Jun 2024
- 2023A Framework for Interpretability in Machine Learning for Medical Imaging2 Oct 2023
- 2023Generate your neural signals from mine: individual-to-individual EEG converters21 Apr 2023