Agentic Autoresearch for CT Reconstruction
On the map: LLM agents and tool use → Medical and scientific domain agents
Abstract (arXiv)
Comparing CT reconstruction methods fairly is labor-intensive and largely manual, and many benchmarks use idealized data. We ask whether a large language model (LLM) agent can do the labor of reconstruction research on its own, and whether a ranking measured on ideal data predicts behavior under realistic noise. We built an agentic loop: the agent edits a solver, runs a short cluster job, reads one frozen metric, and revises. The metric is a calibrated headroom score against the FBP baseline, inside the field of view; every method shares the same differentiable fan-beam projector. We benchmarked 26 methods on Mayo low-dose CT (noise-limited) and a 128-view sparse-view breast task from the noiseless DL-Sparse-View Challenge, with validation-selected iterations scored on a held-out test set. Every trained breast model was then re-scored on noisy inputs (I_0 = 10^5 photons) without retraining, and separately retrained on matched noise. The agent independently implemented, tuned, and benchmarked all 26 methods, and recombined them into a compact solver of 969 parameters that ties the top Mayo tier at the 1% level using 0.4% of the champion's parameters. Benchmarking gives a tier of statistically indistinguishable top methods, not one winner. Mild input noise nearly inverts the breast ranking: the noiseless champion (a supervised image denoiser, hr 0.89) collapses to 0.00, while a learned primal-dual method rises to champion (0.72 to 0.93). An ideal-data leaderboard therefore does not predict robustness. The inversion is a transfer effect, not a permanent deficit: retraining on matched noise restores much of the clean ranking (Spearman rho 0.04 to 0.61). Noise is only the easiest confounder in an open-ended set (beam hardening, scatter, anatomy, disease), so no single-factor challenge certifies generality. Benchmarks should model a broad spectrum of realistic factors at once.
Key facts. No citing papers in the map yet (data through 14 Oct 2026). Placed in Medical and scientific domain agents, one of 16 directions in LLM agents and tool use. Builds on 22 of its 37 references that are in the map. First posted on arXiv 24 Jul 2026.
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22 of 37 references.
References · 22
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- 2021Solving Inverse Problems in Medical Imaging with Score-Based Generative Modelscited by 521
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- 2017Learned Primal-dual Reconstructioncited by 251
- 2022NAF: Neural Attenuation Fields for Sparse-View CBCT Reconstructioncited by 108
- 2024R2-Gaussian: Rectifying Radiative Gaussian Splatting for Tomographic Reconstructioncited by 67
10 more
- 2024WDM: 3D Wavelet Diffusion Models for High-Resolution Medical Image Synthesiscited by 56
- 2021TransCT: Dual-path Transformer for Low Dose Computed Tomographycited by 35
- 2018A Gentle Introduction to Deep Learning in Medical Image Processingcited by 34
- 2019PYRO-NN: Python Reconstruction Operators in Neural Networkscited by 24
- 2021Known Operator Learning and Hybrid Machine Learning in Medical Imaging -- A Review of the Past, the Present, and the Futurecited by 18
- 2022Ultra Low-Parameter Denoising: Trainable Bilateral Filter Layers in Computed Tomographycited by 9
- 2022On the Benefit of Dual-domain Denoising in a Self-supervised Low-dose CT Settingcited by 9
- 2026DM4CT: Benchmarking Diffusion Models for Computed Tomography Reconstructioncited by 3
- 2025Reconstruct Anything Model: a lightweight general model for computational imagingcited by 2
- 2026A Deep Risk Estimator for Known Operator Learningcited by 1
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