GraphAgents: Knowledge Graph-Guided Agentic AI for Cross-Domain Materials Design
On the map: LLM agents and tool use → Medical and scientific domain agents
Abstract (arXiv)
Large Language Models (LLMs) promise to accelerate discovery by reasoning across the expanding scientific landscape. Yet, the challenge is no longer access to information but connecting it in meaningful, domain-spanning ways. In materials science, where innovation demands integrating concepts from molecular chemistry to mechanical performance, this is especially acute. Neither humans nor single-agent LLMs can fully contend with this torrent of information, with the latter often prone to hallucinations. To address this bottleneck, we introduce a multi-agent framework guided by large-scale knowledge graphs to find sustainable substitutes for per- and polyfluoroalkyl substances (PFAS)-chemicals currently under intense regulatory scrutiny. Agents in the framework specialize in problem decomposition, evidence retrieval, design parameter extraction, and graph traversal, uncovering latent connections across distinct knowledge pockets to support hypothesis generation. Ablation studies show that the full multi-agent pipeline outperforms single-shot prompting, underscoring the value of distributed specialization and relational reasoning. We demonstrate that by tailoring graph traversal strategies, the system alternates between exploitative searches focusing on domain-critical outcomes and exploratory searches surfacing emergent cross-connections. Illustrated through the exemplar of biomedical tubing, the framework generates sustainable PFAS-free alternatives that balance tribological performance, thermal stability, chemical resistance, and biocompatibility. This work establishes a framework combining knowledge graphs with multi-agent reasoning to expand the materials design space, showcasing several initial design candidates to demonstrate the approach.
Key facts. Cited by 9 papers in the map (data through 7 Oct 2026). Placed in Medical and scientific domain agents, one of 16 directions in LLM agents and tool use. Builds on 20 of its 46 references that are in the map. First posted on arXiv 7 Feb 2026.
Builds on
20 of 46 references.
Closest ancestors · 1
Same direction, newest first
Other references · 19
- 2017Attention Is All You Needcited by 59,932
- 2023Llama 2: Open Foundation and Fine-Tuned Chat Modelscited by 12,865
- 2019Sentence-BERT: Sentence Embeddings using Siamese BERT-Networkscited by 9,049
- 2023Judging LLM-as-a-Judge with MT-Bench and Chatbot Arenacited by 8,393
- 2023A Survey of Large Language Modelscited by 2,537
- 2022Emergent Abilities of Large Language Modelscited by 2,483
- 2023AutoGen: Enabling Next-Gen LLM Applications via Multi-Agent Conversationcited by 1,906
- 2023A Comprehensive Overview of Large Language Modelscited by 639
- 2024Nomic Embed: Training a Reproducible Long Context Text Embeddercited by 255
- 2023MechAgents: Large language model multi-agent collaborations can solve mechanics problems, generate new data, and integrate knowledgecited by 62
- 2023MechGPT, a language-based strategy for mechanics and materials modeling that connects knowledge across scales, disciplines and modalitiescited by 38
- 2023BioinspiredLLM: Conversational Large Language Model for the Mechanics of Biological and Bio-inspired Materialscited by 29
7 more
- 2024Accelerating Scientific Discovery with Generative Knowledge Extraction, Graph-Based Representation, and Multimodal Intelligent Graph Reasoningcited by 27
- 2025Optimizing the Interface Between Knowledge Graphs and LLMs for Complex Reasoningcited by 17
- 2025Sparks: Multi-Agent Artificial Intelligence Model Discovers Protein Design Principlescited by 16
- 2024From Text to Insight: Large Language Models for Materials Science Data Extractioncited by 15
- 2025In-situ graph reasoning and knowledge expansion using Graph-PReFLexORcited by 11
- 2025Understanding LLM Scientific Reasoning through Promptings and Model's Explanation on the Answerscited by 10
- 2026Higher-Order Knowledge Representations for Agentic Scientific Reasoningcited by 3
Built on by
Citing papers per year: 2026: 9.
9 papers.
- 2026GRAFT-ATHENA: Self-Improving Agentic Teams for Autonomous Discovery and Evolutionary Numerical Algorithmscited by 6
- 2026BeamPERL: Parameter-Efficient RL with Verifiable Rewards Specializes Compact LLMs for Structured Beam Mechanics Reasoningcited by 4
- 2026Self-Revising Discovery Systems for Science: A Categorical Framework for Agentic Artificial Intelligencecited by 3
- 2026Graph-Native Reinforcement Learning Enables Traceable Scientific Hypothesis Generation through Conceptual Recombinationcited by 3
- 2026Integrating Graphs, Large Language Models, and Agents: Reasoning and Retrievalcited by 1
- 2026AdsMind: A Physics-Grounded Multi-Agent System for Self-Correcting Discovery of Adsorption Configurations on Heterogeneous Catalyst Surfacescited by 1
- 2026Material Database Agent: A Multimodal Agentic Framework for Scientific Literature Miningcited by 0
- 2026Cross-domain benchmarks reveal when coordinated AI agents improve scientific inference from partial evidencecited by 0
- 2026Self-Refining Topology Optimization via an LLM-Based Multi-Agent Frameworkcited by 0
- 2026Graph-Native Reinforcement Learning Enables Traceable Scientific Hypothesis Generation through Conceptual Recombination1 Jul 2026
- 2026AdsMind: A Physics-Grounded Multi-Agent System for Self-Correcting Discovery of Adsorption Configurations on Heterogeneous Catalyst Surfaces17 Jun 2026
- 2026Self-Revising Discovery Systems for Science: A Categorical Framework for Agentic Artificial Intelligence31 May 2026
- 2026Self-Refining Topology Optimization via an LLM-Based Multi-Agent Framework22 May 2026
- 2026Cross-domain benchmarks reveal when coordinated AI agents improve scientific inference from partial evidence21 May 2026
- 2026GRAFT-ATHENA: Self-Improving Agentic Teams for Autonomous Discovery and Evolutionary Numerical Algorithms11 May 2026
- 2026Material Database Agent: A Multimodal Agentic Framework for Scientific Literature Mining5 May 2026
- 2026Integrating Graphs, Large Language Models, and Agents: Reasoning and Retrieval17 Apr 2026
- 2026BeamPERL: Parameter-Efficient RL with Verifiable Rewards Specializes Compact LLMs for Structured Beam Mechanics Reasoning4 Mar 2026
Similar, not cited
Close in wording, no citation either way
- 2024SciAgents: Automating scientific discovery through multi-agent intelligent graph reasoning
- 2026Towards Agentic Intelligence for Materials Science
- 2024Leveraging Chemistry Foundation Models to Facilitate Structure Focused Retrieval Augmented Generation in Multi-Agent Workflows for Catalyst and Materials Design
- 2025Hierarchical Multi-agent Large Language Model Reasoning for Autonomous Functional Materials Discovery
- 2024HoneyComb: A Flexible LLM-Based Agent System for Materials Science
- 2025LLM Agents for Knowledge Discovery in Atomic Layer Processing
- 2025Large language models in materials science and the need for open-source approaches
- 2023Agent-based Learning of Materials Datasets from Scientific Literature